RNA–Protein interactions for RNA: ENST00000417504.5

PTPA-211, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4

Gene PTPA, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-211ENST00000417504 AEBP2Q6ZN18 517 aaPredicted RBP24.22■■□□□ 1.47
PTPA-211ENST00000417504 CHIC1Q5VXU3 224 aa23.73■■□□□ 1.39
PTPA-211ENST00000417504 PHF23Q9BUL5 403 aaPredicted RBP20.88■□□□□ 0.93
PTPA-211ENST00000417504 SENP3Q9H4L4 574 aaPredicted RBP20.54■□□□□ 0.88
PTPA-211ENST00000417504 PLPPR3Q6T4P5 718 aa19.3■□□□□ 0.68
PTPA-211ENST00000417504 FOXD1Q16676 465 aa19.06■□□□□ 0.64
PTPA-211ENST00000417504 NISCHQ9Y2I1 1504 aa18.97■□□□□ 0.63
PTPA-211ENST00000417504 PPP6R1Q9UPN7 881 aa18.41■□□□□ 0.54
PTPA-211ENST00000417504 ADRA2BP18089 450 aa18.39■□□□□ 0.53
PTPA-211ENST00000417504 PIAS4Q8N2W9 510 aaPredicted RBP17.99■□□□□ 0.47
PTPA-211ENST00000417504 MSH5O43196 834 aa17.55■□□□□ 0.4
PTPA-211ENST00000417504 PPP4R3CPQ6ZMV5 832 aa17.02■□□□□ 0.32
PTPA-211ENST00000417504 CCDC180Q9P1Z9 1646 aa16.86■□□□□ 0.29
PTPA-211ENST00000417504 SCAF1Q9H7N4 1312 aaKnown RBP16.82■□□□□ 0.28
PTPA-211ENST00000417504 KCNA4P22459 653 aa16.7■□□□□ 0.26
PTPA-211ENST00000417504 MAPK8IP2Q13387 824 aaPredicted RBP16.66■□□□□ 0.26
PTPA-211ENST00000417504 NCBP3Q53F19 620 aaKnown RBP16.59■□□□□ 0.25
PTPA-211ENST00000417504 CNKSR2Q8WXI2 1034 aa16.53■□□□□ 0.24
PTPA-211ENST00000417504 DMRT2Q9Y5R5 561 aa16.41■□□□□ 0.22
PTPA-211ENST00000417504 NPM3O75607 178 aaKnown RBP16.35■□□□□ 0.21
PTPA-211ENST00000417504 ABCC9O60706 1549 aa16.24■□□□□ 0.19
PTPA-211ENST00000417504 RNF216Q9NWF9 866 aaPredicted RBP16.18■□□□□ 0.18
PTPA-211ENST00000417504 HOXD11P31277 338 aaPredicted RBP16.1■□□□□ 0.17
PTPA-211ENST00000417504 SLC4A1APQ9BWU0 796 aaKnown RBP15.92■□□□□ 0.14
PTPA-211ENST00000417504 ZCCHC6Q5VYS8 1495 aaKnown RBP15.91■□□□□ 0.14
PTPA-211ENST00000417504 DNAJC5BQ9UF47 199 aa15.87■□□□□ 0.13
PTPA-211ENST00000417504 POTEDQ86YR6 584 aa15.85■□□□□ 0.13
PTPA-211ENST00000417504 DCAF1Q9Y4B6 1507 aa15.72■□□□□ 0.11
PTPA-211ENST00000417504 DCAF8L1A6NGE4 600 aa15.7■□□□□ 0.1
PTPA-211ENST00000417504 NACADO15069 1562 aa15.67■□□□□ 0.1
PTPA-211ENST00000417504 DCAF8L2P0C7V8 631 aa15.67■□□□□ 0.1
PTPA-211ENST00000417504 MYO15BQ96JP2 1530 aa15.65■□□□□ 0.1
PTPA-211ENST00000417504 RB1CC1Q8TDY2 1594 aa15.65■□□□□ 0.1
PTPA-211ENST00000417504 EHMT2Q96KQ7 1210 aa15.54■□□□□ 0.08
PTPA-211ENST00000417504 SLC4A2P04920 1241 aa15.42■□□□□ 0.06
PTPA-211ENST00000417504 SCRIBQ14160 1630 aa15.39■□□□□ 0.05
PTPA-211ENST00000417504 UNC13AQ9UPW8 1703 aa15.39■□□□□ 0.05
PTPA-211ENST00000417504 ZBTB22O15209 634 aa15.37■□□□□ 0.05
PTPA-211ENST00000417504 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.35■□□□□ 0.05
PTPA-211ENST00000417504 FOXD4L1Q9NU39 408 aa15.35■□□□□ 0.05
PTPA-211ENST00000417504 CSRNP3Q8WYN3 585 aa15.33■□□□□ 0.04
PTPA-211ENST00000417504 SHROOM4Q9ULL8 1493 aa15.21■□□□□ 0.03
PTPA-211ENST00000417504 PABPN1Q86U42 306 aaKnown RBP eCLIP15.11■□□□□ 0.01
PTPA-211ENST00000417504 MYCNP04198 464 aaPredicted RBP15.1■□□□□ 0.01
PTPA-211ENST00000417504 BICRAQ9NZM4 1560 aa15.1■□□□□ 0.01
PTPA-211ENST00000417504 U3KPZ7 1027 aaPredicted RBP15.09■□□□□ 0.01
PTPA-211ENST00000417504 RNF39Q9H2S5 420 aa15.05■□□□□ -0
PTPA-211ENST00000417504 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.93□□□□□ -0.02
PTPA-211ENST00000417504 HNRNPUL2Q1KMD3 747 aaKnown RBP14.93□□□□□ -0.02
PTPA-211ENST00000417504 SAMD1Q6SPF0 538 aaPredicted RBP14.89□□□□□ -0.03
PTPA-211ENST00000417504 C1QBPQ07021 282 aaKnown RBP14.87□□□□□ -0.03
PTPA-211ENST00000417504 ATXN8OSP0DMR3 200 aa14.82□□□□□ -0.04
PTPA-211ENST00000417504 APLP2Q06481 763 aa14.76□□□□□ -0.05
PTPA-211ENST00000417504 BAZ1AQ9NRL2 1556 aaPredicted RBP14.73□□□□□ -0.05
PTPA-211ENST00000417504 SMARCA4P51532 1647 aa14.73□□□□□ -0.05
PTPA-211ENST00000417504 EIF4G1Q04637 1599 aaKnown RBP14.71□□□□□ -0.05
PTPA-211ENST00000417504 CECR2Q9BXF3 1484 aa14.7□□□□□ -0.06
PTPA-211ENST00000417504 ATF5Q9Y2D1 282 aaPredicted RBP14.7□□□□□ -0.06
PTPA-211ENST00000417504 SPINK5Q9NQ38 1064 aaPredicted RBP14.66□□□□□ -0.06
PTPA-211ENST00000417504 CC2D2AQ9P2K1 1620 aa14.65□□□□□ -0.06
PTPA-211ENST00000417504 MROH2BQ7Z745 1585 aa14.63□□□□□ -0.07
PTPA-211ENST00000417504 CACNB1Q02641 598 aaPredicted RBP14.61□□□□□ -0.07
PTPA-211ENST00000417504 CAPN15O75808 1086 aa14.6□□□□□ -0.07
PTPA-211ENST00000417504 WIZO95785 1651 aa14.55□□□□□ -0.08
PTPA-211ENST00000417504 TRHP20396 242 aaPredicted RBP14.55□□□□□ -0.08
PTPA-211ENST00000417504 ZNF219Q9P2Y4 722 aaPredicted RBP14.55□□□□□ -0.08
PTPA-211ENST00000417504 RSF1Q96T23 1441 aaPredicted RBP14.54□□□□□ -0.08
PTPA-211ENST00000417504 SMARCA2P51531 1590 aa14.54□□□□□ -0.08
PTPA-211ENST00000417504 PEG3Q9GZU2 1588 aa14.53□□□□□ -0.08
PTPA-211ENST00000417504 ATAD2BQ9ULI0 1458 aa14.46□□□□□ -0.09
PTPA-211ENST00000417504 SUPT5HO00267 1087 aaKnown RBP14.45□□□□□ -0.1
PTPA-211ENST00000417504 HMGXB3Q12766 1538 aa14.45□□□□□ -0.1
PTPA-211ENST00000417504 BAZ1BQ9UIG0 1483 aaKnown RBP14.44□□□□□ -0.1
PTPA-211ENST00000417504 DNAJC5Q9H3Z4 198 aa14.42□□□□□ -0.1
PTPA-211ENST00000417504 TOP2AP11388 1531 aaKnown RBP14.41□□□□□ -0.1
PTPA-211ENST00000417504 NCAPD3P42695 1498 aa14.37□□□□□ -0.11
PTPA-211ENST00000417504 DSG3P32926 999 aa14.34□□□□□ -0.11
PTPA-211ENST00000417504 POLA2Q14181 598 aa14.34□□□□□ -0.11
PTPA-211ENST00000417504 ABCB7O75027 752 aa14.33□□□□□ -0.12
PTPA-211ENST00000417504 PRDM2Q13029 1718 aa14.16□□□□□ -0.14
PTPA-211ENST00000417504 CCDC88BA6NC98 1476 aa14.16□□□□□ -0.14
PTPA-211ENST00000417504 ZBTB12Q9Y330 459 aaPredicted RBP14.1□□□□□ -0.15
PTPA-211ENST00000417504 FBLN2P98095 1184 aa14.07□□□□□ -0.16
PTPA-211ENST00000417504 MKRN4PQ13434 485 aaPredicted RBP14.06□□□□□ -0.16
PTPA-211ENST00000417504 CUX2O14529 1486 aa14.06□□□□□ -0.16
PTPA-211ENST00000417504 LAMC3Q9Y6N6 1575 aa14.05□□□□□ -0.16
PTPA-211ENST00000417504 ERCC6Q03468 1493 aa14.02□□□□□ -0.16
PTPA-211ENST00000417504 CFTRP13569 1480 aa13.99□□□□□ -0.17
PTPA-211ENST00000417504 CADPSQ9ULU8 1353 aa13.97□□□□□ -0.17
PTPA-211ENST00000417504 NESP48681 1621 aa13.97□□□□□ -0.17
PTPA-211ENST00000417504 KIF21AQ7Z4S6 1674 aa13.96□□□□□ -0.17
PTPA-211ENST00000417504 PDS5BQ9NTI5 1447 aa13.89□□□□□ -0.19
PTPA-211ENST00000417504 FANCD2Q9BXW9 1451 aa13.87□□□□□ -0.19
PTPA-211ENST00000417504 CEP164Q9UPV0 1460 aa13.87□□□□□ -0.19
PTPA-211ENST00000417504 FKBP8Q14318 412 aa13.86□□□□□ -0.19
PTPA-211ENST00000417504 OSCARQ8IYS5 282 aa13.83□□□□□ -0.2
PTPA-211ENST00000417504 ABCC8Q09428 1581 aa13.83□□□□□ -0.2
PTPA-211ENST00000417504 SPDYE4A6NLX3 237 aa13.78□□□□□ -0.2
PTPA-211ENST00000417504 THOC2Q8NI27 1593 aaKnown RBP13.77□□□□□ -0.21
PTPA-211ENST00000417504 BIVM-ERCC5R4GMW8 1640 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms