RNA–Protein interactions for RNA: ENST00000416081.5

SSFA2-204, Transcript of Sperm-specific antigen 2, humanhuman

TSL 1 (best)

Gene SSFA2, Length 5,067 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-204ENST00000416081 RRBP1Q9P2E9 1410 aaKnown RBP10.07□□□□□ -0.8
SSFA2-204ENST00000416081 SIN3AQ96ST3 1273 aa10.06□□□□□ -0.8
SSFA2-204ENST00000416081 PPP1R15AO75807 674 aaPredicted RBP10.06□□□□□ -0.8
SSFA2-204ENST00000416081 NOP58Q9Y2X3 529 aaKnown RBP10.06□□□□□ -0.8
SSFA2-204ENST00000416081 ANP32AP39687 249 aaKnown RBP10.05□□□□□ -0.8
SSFA2-204ENST00000416081 SETD5Q9C0A6 1442 aa10.05□□□□□ -0.8
SSFA2-204ENST00000416081 TONSLQ96HA7 1378 aa10.05□□□□□ -0.8
SSFA2-204ENST00000416081 ATP1B4Q9UN42 357 aaPredicted RBP10.04□□□□□ -0.8
SSFA2-204ENST00000416081 CUX2O14529 1486 aa10.01□□□□□ -0.81
SSFA2-204ENST00000416081 SYNJ1O43426 1573 aa10□□□□□ -0.81
SSFA2-204ENST00000416081 ZBTB47Q9UFB7 747 aaPredicted RBP9.99□□□□□ -0.81
SSFA2-204ENST00000416081 ARAP1Q96P48 1450 aa9.99□□□□□ -0.81
SSFA2-204ENST00000416081 B4GALNT3Q6L9W6 998 aa9.97□□□□□ -0.81
SSFA2-204ENST00000416081 WDR97A6NE52 1622 aa9.97□□□□□ -0.81
SSFA2-204ENST00000416081 ERICH3Q5RHP9 1530 aa9.95□□□□□ -0.82
SSFA2-204ENST00000416081 FAM9BQ8IZU0 186 aa9.95□□□□□ -0.82
SSFA2-204ENST00000416081 MAPKBP1O60336 1514 aa9.94□□□□□ -0.82
SSFA2-204ENST00000416081 PABPN1Q86U42 306 aaKnown RBP eCLIP9.94□□□□□ -0.82
SSFA2-204ENST00000416081 KIF27Q86VH2 1401 aa9.93□□□□□ -0.82
SSFA2-204ENST00000416081 CCDC136Q96JN2 1154 aa9.93□□□□□ -0.82
SSFA2-204ENST00000416081 UNC13AQ9UPW8 1703 aa9.93□□□□□ -0.82
SSFA2-204ENST00000416081 MRS2Q9HD23 443 aa9.92□□□□□ -0.82
SSFA2-204ENST00000416081 IPO9Q96P70 1041 aaKnown RBP9.91□□□□□ -0.82
SSFA2-204ENST00000416081 PRXQ9BXM0 1461 aa9.9□□□□□ -0.82
SSFA2-204ENST00000416081 ANO8Q9HCE9 1232 aaPredicted RBP9.9□□□□□ -0.82
SSFA2-204ENST00000416081 EIF4G2P78344 907 aaKnown RBP eCLIP9.88□□□□□ -0.83
SSFA2-204ENST00000416081 NPM2Q86SE8 214 aaKnown RBP9.88□□□□□ -0.83
SSFA2-204ENST00000416081 RTN4Q9NQC3 1192 aaKnown RBP9.87□□□□□ -0.83
SSFA2-204ENST00000416081 PAK3O75914 559 aaPredicted RBP9.86□□□□□ -0.83
SSFA2-204ENST00000416081 DAXXQ9UER7 740 aaPredicted RBP9.86□□□□□ -0.83
SSFA2-204ENST00000416081 ZBED9Q6R2W3 1325 aa9.85□□□□□ -0.83
SSFA2-204ENST00000416081 ARHGAP35Q9NRY4 1499 aa9.85□□□□□ -0.83
SSFA2-204ENST00000416081 FHAD1B1AJZ9 1412 aa9.85□□□□□ -0.83
SSFA2-204ENST00000416081 TOP2BQ02880 1626 aa9.85□□□□□ -0.83
SSFA2-204ENST00000416081 HSPA5P11021 654 aaKnown RBP9.84□□□□□ -0.83
SSFA2-204ENST00000416081 P3H3Q8IVL6 736 aa9.84□□□□□ -0.83
SSFA2-204ENST00000416081 PHLDB1Q86UU1 1377 aa9.84□□□□□ -0.83
SSFA2-204ENST00000416081 NEFMP07197 916 aa9.84□□□□□ -0.83
SSFA2-204ENST00000416081 SALL2Q9Y467 1007 aaPredicted RBP9.83□□□□□ -0.84
SSFA2-204ENST00000416081 LRRC9Q6ZRR7 1453 aa9.83□□□□□ -0.84
SSFA2-204ENST00000416081 PPM1GO15355 546 aaPredicted RBP9.83□□□□□ -0.84
SSFA2-204ENST00000416081 CNGB1Q14028 1251 aaPredicted RBP9.82□□□□□ -0.84
SSFA2-204ENST00000416081 EIF5BO60841 1220 aaKnown RBP9.82□□□□□ -0.84
SSFA2-204ENST00000416081 TIAM1Q13009 1591 aa9.82□□□□□ -0.84
SSFA2-204ENST00000416081 USP35Q9P2H5 1018 aa9.81□□□□□ -0.84
SSFA2-204ENST00000416081 POLR3GLQ9BT43 218 aa9.81□□□□□ -0.84
SSFA2-204ENST00000416081 LAS1LQ9Y4W2 734 aaKnown RBP9.8□□□□□ -0.84
SSFA2-204ENST00000416081 MAP3K1Q13233 1512 aa9.8□□□□□ -0.84
SSFA2-204ENST00000416081 PRKRIP1Q9H875 184 aaPredicted RBP9.79□□□□□ -0.84
SSFA2-204ENST00000416081 ATAD2BQ9ULI0 1458 aa9.79□□□□□ -0.84
SSFA2-204ENST00000416081 IL27Q8NEV9 243 aa9.79□□□□□ -0.84
SSFA2-204ENST00000416081 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.79□□□□□ -0.84
SSFA2-204ENST00000416081 WASHC2AQ641Q2 1341 aa9.79□□□□□ -0.84
SSFA2-204ENST00000416081 CNTLNQ9NXG0 1405 aa9.78□□□□□ -0.84
SSFA2-204ENST00000416081 NUDCQ9Y266 331 aa9.78□□□□□ -0.84
SSFA2-204ENST00000416081 CCDC18Q5T9S5 1454 aa9.78□□□□□ -0.84
SSFA2-204ENST00000416081 UACAQ9BZF9 1416 aa9.77□□□□□ -0.85
SSFA2-204ENST00000416081 DDRGK1Q96HY6 314 aa9.77□□□□□ -0.85
SSFA2-204ENST00000416081 PEG3Q9GZU2 1588 aa9.77□□□□□ -0.85
SSFA2-204ENST00000416081 MTUS2Q5JR59 1369 aa9.76□□□□□ -0.85
SSFA2-204ENST00000416081 TCERG1O14776 1098 aaKnown RBP9.75□□□□□ -0.85
SSFA2-204ENST00000416081 CARMIL1Q5VZK9 1371 aa9.75□□□□□ -0.85
SSFA2-204ENST00000416081 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.74□□□□□ -0.85
SSFA2-204ENST00000416081 CCDC184Q52MB2 194 aa9.74□□□□□ -0.85
SSFA2-204ENST00000416081 BIVM-ERCC5R4GMW8 1640 aa9.74□□□□□ -0.85
SSFA2-204ENST00000416081 FMN1Q68DA7 1419 aa9.73□□□□□ -0.85
SSFA2-204ENST00000416081 BICRAQ9NZM4 1560 aa9.73□□□□□ -0.85
SSFA2-204ENST00000416081 TMC1Q8TDI8 760 aa9.73□□□□□ -0.85
SSFA2-204ENST00000416081 SMG6Q86US8 1419 aaKnown RBP9.72□□□□□ -0.85
SSFA2-204ENST00000416081 CCDC7Q96M83 1385 aa9.72□□□□□ -0.85
SSFA2-204ENST00000416081 RRP7BPQ9NSQ0 103 aa9.71□□□□□ -0.85
SSFA2-204ENST00000416081 FGD6Q6ZV73 1430 aa9.7□□□□□ -0.86
SSFA2-204ENST00000416081 AKNAQ7Z591 1439 aa9.7□□□□□ -0.86
SSFA2-204ENST00000416081 CHIC2Q9UKJ5 165 aa9.7□□□□□ -0.86
SSFA2-204ENST00000416081 HFM1A2PYH4 1435 aa9.7□□□□□ -0.86
SSFA2-204ENST00000416081 PDE4AP27815 886 aa9.69□□□□□ -0.86
SSFA2-204ENST00000416081 GSE1Q14687 1217 aa9.69□□□□□ -0.86
SSFA2-204ENST00000416081 IGF1RP08069 1367 aa9.69□□□□□ -0.86
SSFA2-204ENST00000416081 UBE2Q2Q8WVN8 375 aa9.68□□□□□ -0.86
SSFA2-204ENST00000416081 CUX1P39880 1505 aa9.68□□□□□ -0.86
SSFA2-204ENST00000416081 L3MBTL2Q969R5 705 aa9.67□□□□□ -0.86
SSFA2-204ENST00000416081 MS4A1P11836 297 aa9.67□□□□□ -0.86
SSFA2-204ENST00000416081 GLIPR1L2Q4G1C9 344 aa9.67□□□□□ -0.86
SSFA2-204ENST00000416081 FHOD3Q2V2M9 1422 aa9.67□□□□□ -0.86
SSFA2-204ENST00000416081 ZNF326Q5BKZ1 582 aaKnown RBP9.66□□□□□ -0.86
SSFA2-204ENST00000416081 SENP3-EIF4A1A0A087X0R7 540 aa9.66□□□□□ -0.86
SSFA2-204ENST00000416081 NCOA2Q15596 1464 aa9.66□□□□□ -0.86
SSFA2-204ENST00000416081 FYCO1Q9BQS8 1478 aa9.66□□□□□ -0.86
SSFA2-204ENST00000416081 C11orf95C9JLR9 678 aaPredicted RBP9.66□□□□□ -0.86
SSFA2-204ENST00000416081 KIF7Q2M1P5 1343 aa9.65□□□□□ -0.87
SSFA2-204ENST00000416081 CASKIN1Q8WXD9 1431 aa9.64□□□□□ -0.87
SSFA2-204ENST00000416081 RRP1P56182 461 aaKnown RBP9.64□□□□□ -0.87
SSFA2-204ENST00000416081 MPHOSPH9Q99550 1183 aa9.64□□□□□ -0.87
SSFA2-204ENST00000416081 RSPH6AQ9H0K4 717 aa9.64□□□□□ -0.87
SSFA2-204ENST00000416081 BRPF3Q9ULD4 1205 aa9.64□□□□□ -0.87
SSFA2-204ENST00000416081 NCOA1Q15788 1441 aa9.64□□□□□ -0.87
SSFA2-204ENST00000416081 PCF11O94913 1555 aaKnown RBP9.64□□□□□ -0.87
SSFA2-204ENST00000416081 RCAN3Q9UKA8 241 aa9.64□□□□□ -0.87
SSFA2-204ENST00000416081 NAIPQ13075 1403 aa9.63□□□□□ -0.87
SSFA2-204ENST00000416081 EXOC6Q8TAG9 804 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms