RNA–Protein interactions for RNA: ENST00000415294.2

LINC00343-202, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 1,320 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-202ENST00000415294 RGL2O15211 777 aa15.43■□□□□ 0.06
LINC00343-202ENST00000415294 FARP1Q9Y4F1 1045 aaPredicted RBP15.43■□□□□ 0.06
LINC00343-202ENST00000415294 HAP1P54257 671 aaPredicted RBP15.38■□□□□ 0.05
LINC00343-202ENST00000415294 CREBZFQ9NS37 354 aa15.36■□□□□ 0.05
LINC00343-202ENST00000415294 NUBP1P53384 320 aa15.35■□□□□ 0.05
LINC00343-202ENST00000415294 NPM1P06748 294 aaKnown RBP eCLIP15.32■□□□□ 0.04
LINC00343-202ENST00000415294 CD44P16070 742 aaKnown RBP15.32■□□□□ 0.04
LINC00343-202ENST00000415294 VSIG10Q8N0Z9 540 aa15.28■□□□□ 0.04
LINC00343-202ENST00000415294 FAM212AQ96EL1 285 aa15.28■□□□□ 0.04
LINC00343-202ENST00000415294 TAOK2Q9UL54 1235 aa15.28■□□□□ 0.04
LINC00343-202ENST00000415294 MNX1P50219 401 aaPredicted RBP15.26■□□□□ 0.03
LINC00343-202ENST00000415294 DCAF8Q5TAQ9 597 aa15.25■□□□□ 0.03
LINC00343-202ENST00000415294 CHGAP10645 457 aaKnown RBP15.23■□□□□ 0.03
LINC00343-202ENST00000415294 PAXIP1Q6ZW49 1069 aaPredicted RBP15.22■□□□□ 0.03
LINC00343-202ENST00000415294 GABBR2O75899 941 aa15.21■□□□□ 0.03
LINC00343-202ENST00000415294 HS6ST3Q8IZP7 471 aa15.21■□□□□ 0.03
LINC00343-202ENST00000415294 SPRYD3Q8NCJ5 442 aa15.2■□□□□ 0.02
LINC00343-202ENST00000415294 CHRM1P11229 460 aaPredicted RBP15.17■□□□□ 0.02
LINC00343-202ENST00000415294 CFAP44Q96MT7 982 aa15.17■□□□□ 0.02
LINC00343-202ENST00000415294 DNAJC5Q9H3Z4 198 aa15.17■□□□□ 0.02
LINC00343-202ENST00000415294 RIOK3O14730 519 aaKnown RBP15.16■□□□□ 0.02
LINC00343-202ENST00000415294 RNF25Q96BH1 459 aaPredicted RBP15.15■□□□□ 0.02
LINC00343-202ENST00000415294 ZRANB1Q9UGI0 708 aa15.14■□□□□ 0.01
LINC00343-202ENST00000415294 PAK3O75914 559 aaPredicted RBP15.1■□□□□ 0.01
LINC00343-202ENST00000415294 RASEFQ8IZ41 740 aa15.1■□□□□ 0.01
LINC00343-202ENST00000415294 VGFO15240 615 aaPredicted RBP15.08■□□□□ 0
LINC00343-202ENST00000415294 ZNF579Q8NAF0 562 aaKnown RBP15.07■□□□□ 0
LINC00343-202ENST00000415294 CLCN6P51797 869 aa15.05■□□□□ -0
LINC00343-202ENST00000415294 BCANQ96GW7 911 aa15.04■□□□□ -0
LINC00343-202ENST00000415294 SGIP1Q9BQI5 828 aa15.04■□□□□ -0
LINC00343-202ENST00000415294 KDM2AQ9Y2K7 1162 aa14.97□□□□□ -0.01
LINC00343-202ENST00000415294 STK25O00506 426 aa14.95□□□□□ -0.02
LINC00343-202ENST00000415294 TSHZ2Q9NRE2 1034 aa14.94□□□□□ -0.02
LINC00343-202ENST00000415294 PHF12Q96QT6 1004 aa14.92□□□□□ -0.02
LINC00343-202ENST00000415294 RYDENQ9NUL5 291 aaKnown RBP14.92□□□□□ -0.02
LINC00343-202ENST00000415294 PYGBP11216 843 aa14.92□□□□□ -0.02
LINC00343-202ENST00000415294 DCBLD2Q96PD2 775 aa14.91□□□□□ -0.02
LINC00343-202ENST00000415294 ZNF467Q7Z7K2 595 aaPredicted RBP14.89□□□□□ -0.03
LINC00343-202ENST00000415294 GALR2O43603 387 aaPredicted RBP14.88□□□□□ -0.03
LINC00343-202ENST00000415294 NKX1-1Q15270 411 aaPredicted RBP14.88□□□□□ -0.03
LINC00343-202ENST00000415294 TSPYL2Q9H2G4 693 aaPredicted RBP14.88□□□□□ -0.03
LINC00343-202ENST00000415294 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.86□□□□□ -0.03
LINC00343-202ENST00000415294 POTEIP0CG38 1075 aa14.86□□□□□ -0.03
LINC00343-202ENST00000415294 ZFP91Q96JP5 570 aaPredicted RBP14.86□□□□□ -0.03
LINC00343-202ENST00000415294 BCL11BQ9C0K0 894 aaPredicted RBP14.85□□□□□ -0.03
LINC00343-202ENST00000415294 GTPBP6O43824 516 aaPredicted RBP14.84□□□□□ -0.03
LINC00343-202ENST00000415294 STK24Q9Y6E0 443 aa14.84□□□□□ -0.03
LINC00343-202ENST00000415294 PDAP1Q13442 181 aaKnown RBP14.76□□□□□ -0.05
LINC00343-202ENST00000415294 CCDC61Q9Y6R9 512 aa14.76□□□□□ -0.05
LINC00343-202ENST00000415294 LHX8Q68G74 356 aa14.73□□□□□ -0.05
LINC00343-202ENST00000415294 MS4A3Q96HJ5 214 aa14.73□□□□□ -0.05
LINC00343-202ENST00000415294 KIF12Q96FN5 646 aa14.65□□□□□ -0.06
LINC00343-202ENST00000415294 PCDHB8Q9UN66 801 aa14.64□□□□□ -0.07
LINC00343-202ENST00000415294 PCDHB13Q9Y5F0 798 aa14.64□□□□□ -0.07
LINC00343-202ENST00000415294 PSEN1P49768 467 aa14.63□□□□□ -0.07
LINC00343-202ENST00000415294 MAP3K13O43283 966 aa14.59□□□□□ -0.07
LINC00343-202ENST00000415294 NBR1Q14596 966 aa14.59□□□□□ -0.07
LINC00343-202ENST00000415294 ASTLQ6HA08 431 aaPredicted RBP14.56□□□□□ -0.08
LINC00343-202ENST00000415294 ATMINO43313 823 aaPredicted RBP14.54□□□□□ -0.08
LINC00343-202ENST00000415294 IFNL1Q8IU54 200 aa14.54□□□□□ -0.08
LINC00343-202ENST00000415294 PELP1Q8IZL8 1130 aaKnown RBP14.53□□□□□ -0.08
LINC00343-202ENST00000415294 SOX12O15370 315 aa14.48□□□□□ -0.09
LINC00343-202ENST00000415294 TRPC6Q9Y210 931 aa14.48□□□□□ -0.09
LINC00343-202ENST00000415294 SLC39A7Q92504 469 aa14.47□□□□□ -0.09
LINC00343-202ENST00000415294 MFRPQ9BY79 579 aa14.47□□□□□ -0.09
LINC00343-202ENST00000415294 METRNQ9UJH8 293 aa14.47□□□□□ -0.09
LINC00343-202ENST00000415294 P3H3Q8IVL6 736 aa14.46□□□□□ -0.09
LINC00343-202ENST00000415294 BMP2KQ9NSY1 1161 aaPredicted RBP14.46□□□□□ -0.09
LINC00343-202ENST00000415294 TIE1P35590 1138 aa14.45□□□□□ -0.1
LINC00343-202ENST00000415294 ATN1P54259 1190 aaPredicted RBP14.45□□□□□ -0.1
LINC00343-202ENST00000415294 NLRP6P59044 892 aa14.44□□□□□ -0.1
LINC00343-202ENST00000415294 C7P10643 843 aa14.43□□□□□ -0.1
LINC00343-202ENST00000415294 TPRNQ4KMQ1 711 aa14.42□□□□□ -0.1
LINC00343-202ENST00000415294 PRKCSHP14314 528 aaPredicted RBP14.41□□□□□ -0.1
LINC00343-202ENST00000415294 CABP2Q9NPB3 220 aa14.41□□□□□ -0.1
LINC00343-202ENST00000415294 EFCAB3Q8N7B9 438 aa14.4□□□□□ -0.1
LINC00343-202ENST00000415294 WDR70Q9NW82 654 aa14.4□□□□□ -0.1
LINC00343-202ENST00000415294 FBXO22Q8NEZ5 403 aa14.39□□□□□ -0.11
LINC00343-202ENST00000415294 TTLL13PA6NNM8 815 aa14.38□□□□□ -0.11
LINC00343-202ENST00000415294 POTEB2H3BUK9 544 aa14.38□□□□□ -0.11
LINC00343-202ENST00000415294 CADPS2Q86UW7 1296 aa14.33□□□□□ -0.12
LINC00343-202ENST00000415294 PHF8Q9UPP1 1060 aa14.31□□□□□ -0.12
LINC00343-202ENST00000415294 GOLGA2Q08379 1002 aa14.3□□□□□ -0.12
LINC00343-202ENST00000415294 OTUD5Q96G74 571 aa14.3□□□□□ -0.12
LINC00343-202ENST00000415294 TMEM106CQ9BVX2 250 aa14.3□□□□□ -0.12
LINC00343-202ENST00000415294 TRIM35Q9UPQ4 493 aa14.3□□□□□ -0.12
LINC00343-202ENST00000415294 PPP1R37O75864 691 aa14.25□□□□□ -0.13
LINC00343-202ENST00000415294 SEC24BO95487 1268 aa14.25□□□□□ -0.13
LINC00343-202ENST00000415294 MKRN3Q13064 507 aaKnown RBP14.21□□□□□ -0.13
LINC00343-202ENST00000415294 IER5LQ5T953 404 aa14.21□□□□□ -0.13
LINC00343-202ENST00000415294 MAMSTRQ6ZN01 415 aa14.21□□□□□ -0.13
LINC00343-202ENST00000415294 KCNV2Q8TDN2 545 aa14.21□□□□□ -0.13
LINC00343-202ENST00000415294 POTEFA5A3E0 1075 aa14.2□□□□□ -0.14
LINC00343-202ENST00000415294 POTEJP0CG39 1038 aa14.19□□□□□ -0.14
LINC00343-202ENST00000415294 ARHGEF1Q92888 912 aaKnown RBP14.18□□□□□ -0.14
LINC00343-202ENST00000415294 COLQQ9Y215 455 aaPredicted RBP14.18□□□□□ -0.14
LINC00343-202ENST00000415294 MS4A4AQ96JQ5 239 aa14.17□□□□□ -0.14
LINC00343-202ENST00000415294 SCUBE2Q9NQ36 999 aa14.17□□□□□ -0.14
LINC00343-202ENST00000415294 PDE4AP27815 886 aa14.15□□□□□ -0.15
LINC00343-202ENST00000415294 E2F4Q16254 413 aa14.15□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms