RNA–Protein interactions for RNA: ENST00000415294.2

LINC00343-202, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 1,320 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-202ENST00000415294 AEBP2Q6ZN18 517 aaPredicted RBP29.71■■■□□ 2.35
LINC00343-202ENST00000415294 CHIC1Q5VXU3 224 aa28.43■■■□□ 2.14
LINC00343-202ENST00000415294 SENP3Q9H4L4 574 aaPredicted RBP25.38■■□□□ 1.65
LINC00343-202ENST00000415294 PHF23Q9BUL5 403 aaPredicted RBP25.05■■□□□ 1.6
LINC00343-202ENST00000415294 FOXD1Q16676 465 aa23.59■■□□□ 1.37
LINC00343-202ENST00000415294 PLPPR3Q6T4P5 718 aa22.93■■□□□ 1.26
LINC00343-202ENST00000415294 PPP6R1Q9UPN7 881 aa22.18■■□□□ 1.14
LINC00343-202ENST00000415294 ADRA2BP18089 450 aa22.15■■□□□ 1.14
LINC00343-202ENST00000415294 PIAS4Q8N2W9 510 aaPredicted RBP22.15■■□□□ 1.14
LINC00343-202ENST00000415294 MSH5O43196 834 aa22.06■■□□□ 1.12
LINC00343-202ENST00000415294 POTEDQ86YR6 584 aa21.19■□□□□ 0.98
LINC00343-202ENST00000415294 KCNA4P22459 653 aa20.42■□□□□ 0.86
LINC00343-202ENST00000415294 SCAF1Q9H7N4 1312 aaKnown RBP20.32■□□□□ 0.84
LINC00343-202ENST00000415294 MAPK8IP2Q13387 824 aaPredicted RBP20.27■□□□□ 0.84
LINC00343-202ENST00000415294 PPP4R3CPQ6ZMV5 832 aa20.22■□□□□ 0.83
LINC00343-202ENST00000415294 DMRT2Q9Y5R5 561 aa20.14■□□□□ 0.81
LINC00343-202ENST00000415294 NCBP3Q53F19 620 aaKnown RBP20■□□□□ 0.79
LINC00343-202ENST00000415294 EHMT2Q96KQ7 1210 aa19.68■□□□□ 0.74
LINC00343-202ENST00000415294 SLC4A1APQ9BWU0 796 aaKnown RBP19.62■□□□□ 0.73
LINC00343-202ENST00000415294 CNKSR2Q8WXI2 1034 aa19.6■□□□□ 0.73
LINC00343-202ENST00000415294 NPM3O75607 178 aaKnown RBP19.55■□□□□ 0.72
LINC00343-202ENST00000415294 HOXD11P31277 338 aaPredicted RBP19.45■□□□□ 0.7
LINC00343-202ENST00000415294 DCAF8L1A6NGE4 600 aa19.39■□□□□ 0.69
LINC00343-202ENST00000415294 RNF216Q9NWF9 866 aaPredicted RBP19.37■□□□□ 0.69
LINC00343-202ENST00000415294 CSRNP3Q8WYN3 585 aa19.22■□□□□ 0.67
LINC00343-202ENST00000415294 DNAJC5BQ9UF47 199 aa19.12■□□□□ 0.65
LINC00343-202ENST00000415294 CACNB1Q02641 598 aaPredicted RBP18.83■□□□□ 0.61
LINC00343-202ENST00000415294 RNF39Q9H2S5 420 aa18.8■□□□□ 0.6
LINC00343-202ENST00000415294 ZBTB22O15209 634 aa18.75■□□□□ 0.59
LINC00343-202ENST00000415294 FOXD4L1Q9NU39 408 aa18.7■□□□□ 0.58
LINC00343-202ENST00000415294 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.6■□□□□ 0.57
LINC00343-202ENST00000415294 C1QBPQ07021 282 aaKnown RBP18.56■□□□□ 0.56
LINC00343-202ENST00000415294 SLC4A2P04920 1241 aa18.3■□□□□ 0.52
LINC00343-202ENST00000415294 U3KPZ7 1027 aaPredicted RBP18.18■□□□□ 0.5
LINC00343-202ENST00000415294 MYCNP04198 464 aaPredicted RBP18.15■□□□□ 0.5
LINC00343-202ENST00000415294 ATXN8OSP0DMR3 200 aa18.09■□□□□ 0.49
LINC00343-202ENST00000415294 CAPN15O75808 1086 aa17.88■□□□□ 0.45
LINC00343-202ENST00000415294 SPINK5Q9NQ38 1064 aaPredicted RBP17.87■□□□□ 0.45
LINC00343-202ENST00000415294 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.8■□□□□ 0.44
LINC00343-202ENST00000415294 HNRNPUL2Q1KMD3 747 aaKnown RBP17.8■□□□□ 0.44
LINC00343-202ENST00000415294 APLP2Q06481 763 aa17.77■□□□□ 0.44
LINC00343-202ENST00000415294 SAMD1Q6SPF0 538 aaPredicted RBP17.72■□□□□ 0.43
LINC00343-202ENST00000415294 DSG3P32926 999 aa17.67■□□□□ 0.42
LINC00343-202ENST00000415294 TRHP20396 242 aaPredicted RBP17.64■□□□□ 0.41
LINC00343-202ENST00000415294 ZNF219Q9P2Y4 722 aaPredicted RBP17.6■□□□□ 0.41
LINC00343-202ENST00000415294 ABCB7O75027 752 aa17.47■□□□□ 0.39
LINC00343-202ENST00000415294 ATF5Q9Y2D1 282 aaPredicted RBP17.44■□□□□ 0.38
LINC00343-202ENST00000415294 FKBP8Q14318 412 aa17.33■□□□□ 0.36
LINC00343-202ENST00000415294 POLA2Q14181 598 aa17.18■□□□□ 0.34
LINC00343-202ENST00000415294 AMER1Q5JTC6 1135 aaPredicted RBP17.03■□□□□ 0.32
LINC00343-202ENST00000415294 RBM42Q9BTD8 480 aaKnown RBP16.92■□□□□ 0.3
LINC00343-202ENST00000415294 ZBTB12Q9Y330 459 aaPredicted RBP16.88■□□□□ 0.29
LINC00343-202ENST00000415294 FBLN2P98095 1184 aa16.86■□□□□ 0.29
LINC00343-202ENST00000415294 RTN4Q9NQC3 1192 aaKnown RBP16.86■□□□□ 0.29
LINC00343-202ENST00000415294 SPDYE4A6NLX3 237 aa16.76■□□□□ 0.27
LINC00343-202ENST00000415294 MKRN4PQ13434 485 aaPredicted RBP16.76■□□□□ 0.27
LINC00343-202ENST00000415294 FBXO3Q9UK99 471 aa16.7■□□□□ 0.26
LINC00343-202ENST00000415294 POTEHQ6S545 545 aa16.66■□□□□ 0.26
LINC00343-202ENST00000415294 OSCARQ8IYS5 282 aa16.65■□□□□ 0.26
LINC00343-202ENST00000415294 PROM2Q8N271 834 aa16.64■□□□□ 0.25
LINC00343-202ENST00000415294 AKT1S1Q96B36 256 aa16.53■□□□□ 0.24
LINC00343-202ENST00000415294 CHRDL2Q6WN34 429 aa16.45■□□□□ 0.22
LINC00343-202ENST00000415294 VASPP50552 380 aaPredicted RBP16.37■□□□□ 0.21
LINC00343-202ENST00000415294 REM2Q8IYK8 340 aaPredicted RBP16.37■□□□□ 0.21
LINC00343-202ENST00000415294 SPDYE2BA6NHP3 402 aa16.34■□□□□ 0.21
LINC00343-202ENST00000415294 SLC24A1O60721 1099 aa16.34■□□□□ 0.21
LINC00343-202ENST00000415294 SPDYE6P0CI01 402 aa16.34■□□□□ 0.21
LINC00343-202ENST00000415294 SPDYE2Q495Y8 402 aa16.34■□□□□ 0.21
LINC00343-202ENST00000415294 ZNF692Q9BU19 519 aaPredicted RBP16.22■□□□□ 0.19
LINC00343-202ENST00000415294 PITPNM1O00562 1244 aa16.2■□□□□ 0.18
LINC00343-202ENST00000415294 SSUH2Q9Y2M2 353 aa16.18■□□□□ 0.18
LINC00343-202ENST00000415294 STAG3Q9UJ98 1225 aa16.14■□□□□ 0.17
LINC00343-202ENST00000415294 IFNLR1Q8IU57 520 aaPredicted RBP16.13■□□□□ 0.17
LINC00343-202ENST00000415294 PIP4P2Q8N4L2 257 aa16.08■□□□□ 0.16
LINC00343-202ENST00000415294 SPDYE1Q8NFV5 336 aaPredicted RBP16.03■□□□□ 0.16
LINC00343-202ENST00000415294 PABPN1Q86U42 306 aaKnown RBP eCLIP16.01■□□□□ 0.15
LINC00343-202ENST00000415294 CLEC11AQ9Y240 323 aa16.01■□□□□ 0.15
LINC00343-202ENST00000415294 FXR2P51116 673 aaKnown RBP eCLIP15.99■□□□□ 0.15
LINC00343-202ENST00000415294 SPOCK2Q92563 424 aa15.93■□□□□ 0.14
LINC00343-202ENST00000415294 KLHL34Q8N239 644 aa15.91■□□□□ 0.14
LINC00343-202ENST00000415294 PLCD3Q8N3E9 789 aa15.89■□□□□ 0.13
LINC00343-202ENST00000415294 PKD2Q13563 968 aa15.84■□□□□ 0.13
LINC00343-202ENST00000415294 PLEKHG5O94827 1062 aa15.82■□□□□ 0.12
LINC00343-202ENST00000415294 MIER1Q8N108 512 aa15.81■□□□□ 0.12
LINC00343-202ENST00000415294 PRKAR2AP13861 404 aaKnown RBP15.8■□□□□ 0.12
LINC00343-202ENST00000415294 ZBTB47Q9UFB7 747 aaPredicted RBP15.8■□□□□ 0.12
LINC00343-202ENST00000415294 HAX1O00165 279 aa15.78■□□□□ 0.12
LINC00343-202ENST00000415294 PRR29P0C7W0 189 aa15.76■□□□□ 0.11
LINC00343-202ENST00000415294 SP7Q8TDD2 431 aaPredicted RBP15.7■□□□□ 0.1
LINC00343-202ENST00000415294 DCAF8L2P0C7V8 631 aa15.69■□□□□ 0.1
LINC00343-202ENST00000415294 PLCB2Q00722 1185 aa15.68■□□□□ 0.1
LINC00343-202ENST00000415294 ECM2O94769 699 aaPredicted RBP15.66■□□□□ 0.1
LINC00343-202ENST00000415294 CHADLQ6NUI6 762 aa15.65■□□□□ 0.1
LINC00343-202ENST00000415294 TRIM41Q8WV44 630 aa15.56■□□□□ 0.08
LINC00343-202ENST00000415294 EVX2Q03828 476 aa15.52■□□□□ 0.08
LINC00343-202ENST00000415294 C19orf67A6NJJ6 358 aa15.48■□□□□ 0.07
LINC00343-202ENST00000415294 CIZ1Q9ULV3 898 aaPredicted RBP15.48■□□□□ 0.07
LINC00343-202ENST00000415294 BBXQ8WY36 941 aaPredicted RBP15.47■□□□□ 0.07
LINC00343-202ENST00000415294 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.46■□□□□ 0.07
LINC00343-202ENST00000415294 GSE1Q14687 1217 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms