RNA–Protein interactions for RNA: ENST00000415237.1

AC004988.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC004988.1, Length 1,771 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004988.1-201ENST00000415237 REM2Q8IYK8 340 aaPredicted RBP12.17□□□□□ -0.46
AC004988.1-201ENST00000415237 TOPBP1Q92547 1522 aa12.17□□□□□ -0.46
AC004988.1-201ENST00000415237 THOC2Q8NI27 1593 aaKnown RBP12.16□□□□□ -0.46
AC004988.1-201ENST00000415237 RUSC2Q8N2Y8 1516 aa12.16□□□□□ -0.46
AC004988.1-201ENST00000415237 EHMT2Q96KQ7 1210 aa12.16□□□□□ -0.46
AC004988.1-201ENST00000415237 FGD5Q6ZNL6 1462 aa12.15□□□□□ -0.46
AC004988.1-201ENST00000415237 SOGA1O94964 1423 aa12.14□□□□□ -0.47
AC004988.1-201ENST00000415237 MRC2Q9UBG0 1479 aa12.12□□□□□ -0.47
AC004988.1-201ENST00000415237 SLC4A2P04920 1241 aa12.12□□□□□ -0.47
AC004988.1-201ENST00000415237 RAD54L2Q9Y4B4 1467 aa12.11□□□□□ -0.47
AC004988.1-201ENST00000415237 POLA2Q14181 598 aa12.1□□□□□ -0.47
AC004988.1-201ENST00000415237 POLA1P09884 1462 aaPredicted RBP12.1□□□□□ -0.47
AC004988.1-201ENST00000415237 WDR97A6NE52 1622 aa12.08□□□□□ -0.48
AC004988.1-201ENST00000415237 WDR62O43379 1518 aa12.08□□□□□ -0.48
AC004988.1-201ENST00000415237 LOC105371045A0A1W2PR82 267 aa12.05□□□□□ -0.48
AC004988.1-201ENST00000415237 PITPNM1O00562 1244 aa12.04□□□□□ -0.48
AC004988.1-201ENST00000415237 TARBP1Q13395 1621 aaKnown RBP12.04□□□□□ -0.48
AC004988.1-201ENST00000415237 CUX2O14529 1486 aa12.03□□□□□ -0.48
AC004988.1-201ENST00000415237 ZNF608Q9ULD9 1512 aaPredicted RBP11.99□□□□□ -0.49
AC004988.1-201ENST00000415237 PBRM1Q86U86 1689 aa11.99□□□□□ -0.49
AC004988.1-201ENST00000415237 TDRD9Q8NDG6 1382 aaKnown RBP11.98□□□□□ -0.49
AC004988.1-201ENST00000415237 ABCA5Q8WWZ7 1642 aa11.97□□□□□ -0.49
AC004988.1-201ENST00000415237 ABCA10Q8WWZ4 1543 aa11.96□□□□□ -0.5
AC004988.1-201ENST00000415237 EIF4G3O43432 1585 aaKnown RBP11.96□□□□□ -0.5
AC004988.1-201ENST00000415237 AQRO60306 1485 aaKnown RBP eCLIP11.95□□□□□ -0.5
AC004988.1-201ENST00000415237 GABBR2O75899 941 aa11.95□□□□□ -0.5
AC004988.1-201ENST00000415237 KIF27Q86VH2 1401 aa11.93□□□□□ -0.5
AC004988.1-201ENST00000415237 CSRNP3Q8WYN3 585 aa11.91□□□□□ -0.5
AC004988.1-201ENST00000415237 IFT140Q96RY7 1462 aa11.9□□□□□ -0.5
AC004988.1-201ENST00000415237 GAPVD1Q14C86 1478 aa11.9□□□□□ -0.5
AC004988.1-201ENST00000415237 RAPGEF2Q9Y4G8 1499 aa11.89□□□□□ -0.51
AC004988.1-201ENST00000415237 ZBTB12Q9Y330 459 aaPredicted RBP11.88□□□□□ -0.51
AC004988.1-201ENST00000415237 EEA1Q15075 1411 aa11.88□□□□□ -0.51
AC004988.1-201ENST00000415237 KIF21BO75037 1637 aa11.88□□□□□ -0.51
AC004988.1-201ENST00000415237 IGF1RP08069 1367 aa11.86□□□□□ -0.51
AC004988.1-201ENST00000415237 C19orf67A6NJJ6 358 aa11.84□□□□□ -0.51
AC004988.1-201ENST00000415237 RANGAP1P46060 587 aaPredicted RBP11.84□□□□□ -0.51
AC004988.1-201ENST00000415237 CUL7Q14999 1698 aa11.83□□□□□ -0.52
AC004988.1-201ENST00000415237 GOLGA3Q08378 1498 aa11.82□□□□□ -0.52
AC004988.1-201ENST00000415237 SNAPC4Q5SXM2 1469 aa11.82□□□□□ -0.52
AC004988.1-201ENST00000415237 PRXQ9BXM0 1461 aa11.82□□□□□ -0.52
AC004988.1-201ENST00000415237 ADAMTS12P58397 1594 aa11.82□□□□□ -0.52
AC004988.1-201ENST00000415237 ERICH3Q5RHP9 1530 aa11.81□□□□□ -0.52
AC004988.1-201ENST00000415237 UBTFP17480 764 aaKnown RBP11.81□□□□□ -0.52
AC004988.1-201ENST00000415237 CARMIL1Q5VZK9 1371 aa11.8□□□□□ -0.52
AC004988.1-201ENST00000415237 CHD1O14646 1710 aa11.8□□□□□ -0.52
AC004988.1-201ENST00000415237 GRIN2BQ13224 1484 aa11.8□□□□□ -0.52
AC004988.1-201ENST00000415237 CTTNBP2Q8WZ74 1663 aa11.79□□□□□ -0.52
AC004988.1-201ENST00000415237 FBLN2P98095 1184 aa11.75□□□□□ -0.53
AC004988.1-201ENST00000415237 OSCARQ8IYS5 282 aa11.74□□□□□ -0.53
AC004988.1-201ENST00000415237 SLC4A1APQ9BWU0 796 aaKnown RBP11.74□□□□□ -0.53
AC004988.1-201ENST00000415237 PRKAR2AP13861 404 aaKnown RBP11.74□□□□□ -0.53
AC004988.1-201ENST00000415237 FHAD1B1AJZ9 1412 aa11.72□□□□□ -0.53
AC004988.1-201ENST00000415237 CEP162Q5TB80 1403 aa11.72□□□□□ -0.53
AC004988.1-201ENST00000415237 CEP170Q5SW79 1584 aa11.7□□□□□ -0.54
AC004988.1-201ENST00000415237 MAGI1Q96QZ7 1491 aaPredicted RBP11.7□□□□□ -0.54
AC004988.1-201ENST00000415237 TNIKQ9UKE5 1360 aa11.7□□□□□ -0.54
AC004988.1-201ENST00000415237 GRIN2AQ12879 1464 aa11.69□□□□□ -0.54
AC004988.1-201ENST00000415237 SYNJ2O15056 1496 aa11.68□□□□□ -0.54
AC004988.1-201ENST00000415237 POTEMA6NI47 508 aa11.67□□□□□ -0.54
AC004988.1-201ENST00000415237 CHMP7Q8WUX9 453 aaPredicted RBP11.67□□□□□ -0.54
AC004988.1-201ENST00000415237 P3H3Q8IVL6 736 aa11.65□□□□□ -0.54
AC004988.1-201ENST00000415237 PCDH10Q9P2E7 1040 aa11.64□□□□□ -0.55
AC004988.1-201ENST00000415237 CLIP1P30622 1438 aa11.64□□□□□ -0.55
AC004988.1-201ENST00000415237 IQGAP2Q13576 1575 aa11.64□□□□□ -0.55
AC004988.1-201ENST00000415237 POTEIP0CG38 1075 aa11.62□□□□□ -0.55
AC004988.1-201ENST00000415237 ARHGAP35Q9NRY4 1499 aa11.61□□□□□ -0.55
AC004988.1-201ENST00000415237 ARAP1Q96P48 1450 aa11.6□□□□□ -0.55
AC004988.1-201ENST00000415237 PPARGC1BQ86YN6 1023 aaKnown RBP11.6□□□□□ -0.55
AC004988.1-201ENST00000415237 TTBK1Q5TCY1 1321 aaPredicted RBP11.6□□□□□ -0.55
AC004988.1-201ENST00000415237 POTEGQ6S5H5 508 aa11.59□□□□□ -0.55
AC004988.1-201ENST00000415237 FHOD3Q2V2M9 1422 aa11.58□□□□□ -0.56
AC004988.1-201ENST00000415237 MYCNP04198 464 aaPredicted RBP11.57□□□□□ -0.56
AC004988.1-201ENST00000415237 SAMD9Q5K651 1589 aa11.57□□□□□ -0.56
AC004988.1-201ENST00000415237 NUP160Q12769 1436 aa11.57□□□□□ -0.56
AC004988.1-201ENST00000415237 ERCC6L2Q5T890 1561 aa11.56□□□□□ -0.56
AC004988.1-201ENST00000415237 LRRIQ1Q96JM4 1722 aa11.55□□□□□ -0.56
AC004988.1-201ENST00000415237 KIAA0586Q9BVV6 1533 aa11.54□□□□□ -0.56
AC004988.1-201ENST00000415237 KIAA0556O60303 1618 aa11.53□□□□□ -0.56
AC004988.1-201ENST00000415237 PCF11O94913 1555 aaKnown RBP11.53□□□□□ -0.56
AC004988.1-201ENST00000415237 CLASP1Q7Z460 1538 aa11.52□□□□□ -0.56
AC004988.1-201ENST00000415237 DISP1Q96F81 1524 aa11.52□□□□□ -0.56
AC004988.1-201ENST00000415237 UGGT2Q9NYU1 1516 aa11.51□□□□□ -0.57
AC004988.1-201ENST00000415237 EFCAB5A4FU69 1503 aa11.51□□□□□ -0.57
AC004988.1-201ENST00000415237 SHROOM2Q13796 1616 aa11.5□□□□□ -0.57
AC004988.1-201ENST00000415237 CLCN6P51797 869 aa11.49□□□□□ -0.57
AC004988.1-201ENST00000415237 VPS8Q8N3P4 1428 aa11.49□□□□□ -0.57
AC004988.1-201ENST00000415237 ARID3CA6NKF2 412 aa11.48□□□□□ -0.57
AC004988.1-201ENST00000415237 JPH4Q96JJ6 628 aa11.48□□□□□ -0.57
AC004988.1-201ENST00000415237 ATP1B4Q9UN42 357 aaPredicted RBP11.48□□□□□ -0.57
AC004988.1-201ENST00000415237 PRG4Q92954 1404 aaPredicted RBP11.47□□□□□ -0.57
AC004988.1-201ENST00000415237 SPDYE1Q8NFV5 336 aaPredicted RBP11.46□□□□□ -0.57
AC004988.1-201ENST00000415237 CLEC11AQ9Y240 323 aa11.46□□□□□ -0.58
AC004988.1-201ENST00000415237 OTUD5Q96G74 571 aa11.44□□□□□ -0.58
AC004988.1-201ENST00000415237 DCBLD2Q96PD2 775 aa11.44□□□□□ -0.58
AC004988.1-201ENST00000415237 CFAP43Q8NDM7 1665 aa11.42□□□□□ -0.58
AC004988.1-201ENST00000415237 PLB1Q6P1J6 1458 aa11.41□□□□□ -0.58
AC004988.1-201ENST00000415237 RAPGEF6Q8TEU7 1601 aa11.41□□□□□ -0.58
AC004988.1-201ENST00000415237 CDK13Q14004 1512 aaKnown RBP11.4□□□□□ -0.58
AC004988.1-201ENST00000415237 CARMIL2Q6F5E8 1435 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms