RNA–Protein interactions for RNA: ENST00000415237.1

AC004988.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC004988.1, Length 1,771 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004988.1-201ENST00000415237 AEBP2Q6ZN18 517 aaPredicted RBP22.27■■□□□ 1.16
AC004988.1-201ENST00000415237 CHIC1Q5VXU3 224 aa20.95■□□□□ 0.94
AC004988.1-201ENST00000415237 SENP3Q9H4L4 574 aaPredicted RBP19.32■□□□□ 0.68
AC004988.1-201ENST00000415237 POTEDQ86YR6 584 aa18.91■□□□□ 0.62
AC004988.1-201ENST00000415237 PHF23Q9BUL5 403 aaPredicted RBP18.84■□□□□ 0.61
AC004988.1-201ENST00000415237 FOXD1Q16676 465 aa18.06■□□□□ 0.48
AC004988.1-201ENST00000415237 MSH5O43196 834 aa17.46■□□□□ 0.39
AC004988.1-201ENST00000415237 NISCHQ9Y2I1 1504 aa16.89■□□□□ 0.29
AC004988.1-201ENST00000415237 PIAS4Q8N2W9 510 aaPredicted RBP16.64■□□□□ 0.25
AC004988.1-201ENST00000415237 PPP6R1Q9UPN7 881 aa15.94■□□□□ 0.14
AC004988.1-201ENST00000415237 ADRA2BP18089 450 aa15.85■□□□□ 0.13
AC004988.1-201ENST00000415237 CACNB1Q02641 598 aaPredicted RBP15.66■□□□□ 0.1
AC004988.1-201ENST00000415237 PLPPR3Q6T4P5 718 aa15.59■□□□□ 0.09
AC004988.1-201ENST00000415237 DMRT2Q9Y5R5 561 aa15.11■□□□□ 0.01
AC004988.1-201ENST00000415237 MAPK8IP2Q13387 824 aaPredicted RBP14.89□□□□□ -0.03
AC004988.1-201ENST00000415237 CCDC180Q9P1Z9 1646 aa14.82□□□□□ -0.04
AC004988.1-201ENST00000415237 RNF39Q9H2S5 420 aa14.72□□□□□ -0.05
AC004988.1-201ENST00000415237 SCAF1Q9H7N4 1312 aaKnown RBP14.67□□□□□ -0.06
AC004988.1-201ENST00000415237 POTEHQ6S545 545 aa14.61□□□□□ -0.07
AC004988.1-201ENST00000415237 DCAF8L1A6NGE4 600 aa14.56□□□□□ -0.08
AC004988.1-201ENST00000415237 C1QBPQ07021 282 aaKnown RBP14.5□□□□□ -0.09
AC004988.1-201ENST00000415237 ABCC9O60706 1549 aa14.28□□□□□ -0.12
AC004988.1-201ENST00000415237 ZCCHC6Q5VYS8 1495 aaKnown RBP14.15□□□□□ -0.14
AC004988.1-201ENST00000415237 DCAF8L2P0C7V8 631 aa14.12□□□□□ -0.15
AC004988.1-201ENST00000415237 HOXD11P31277 338 aaPredicted RBP14.1□□□□□ -0.15
AC004988.1-201ENST00000415237 DNAJC5BQ9UF47 199 aa13.91□□□□□ -0.18
AC004988.1-201ENST00000415237 SHROOM4Q9ULL8 1493 aa13.85□□□□□ -0.19
AC004988.1-201ENST00000415237 DCAF1Q9Y4B6 1507 aa13.84□□□□□ -0.19
AC004988.1-201ENST00000415237 NACADO15069 1562 aa13.78□□□□□ -0.2
AC004988.1-201ENST00000415237 RB1CC1Q8TDY2 1594 aa13.75□□□□□ -0.21
AC004988.1-201ENST00000415237 SCRIBQ14160 1630 aa13.75□□□□□ -0.21
AC004988.1-201ENST00000415237 RNF216Q9NWF9 866 aaPredicted RBP13.71□□□□□ -0.22
AC004988.1-201ENST00000415237 UNC13AQ9UPW8 1703 aa13.7□□□□□ -0.22
AC004988.1-201ENST00000415237 MYO15BQ96JP2 1530 aa13.7□□□□□ -0.22
AC004988.1-201ENST00000415237 CNKSR2Q8WXI2 1034 aa13.53□□□□□ -0.24
AC004988.1-201ENST00000415237 PPP4R3CPQ6ZMV5 832 aa13.49□□□□□ -0.25
AC004988.1-201ENST00000415237 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.47□□□□□ -0.25
AC004988.1-201ENST00000415237 PABPN1Q86U42 306 aaKnown RBP eCLIP13.43□□□□□ -0.26
AC004988.1-201ENST00000415237 BICRAQ9NZM4 1560 aa13.43□□□□□ -0.26
AC004988.1-201ENST00000415237 DSG3P32926 999 aa13.38□□□□□ -0.27
AC004988.1-201ENST00000415237 CECR2Q9BXF3 1484 aa13.23□□□□□ -0.29
AC004988.1-201ENST00000415237 CAPN15O75808 1086 aa13.22□□□□□ -0.29
AC004988.1-201ENST00000415237 SP7Q8TDD2 431 aaPredicted RBP13.17□□□□□ -0.3
AC004988.1-201ENST00000415237 SUPT5HO00267 1087 aaKnown RBP13.16□□□□□ -0.3
AC004988.1-201ENST00000415237 MROH2BQ7Z745 1585 aa13.12□□□□□ -0.31
AC004988.1-201ENST00000415237 SPINK5Q9NQ38 1064 aaPredicted RBP13.12□□□□□ -0.31
AC004988.1-201ENST00000415237 SMARCA4P51532 1647 aa13.08□□□□□ -0.32
AC004988.1-201ENST00000415237 WIZO95785 1651 aa13.08□□□□□ -0.32
AC004988.1-201ENST00000415237 RSF1Q96T23 1441 aaPredicted RBP13.04□□□□□ -0.32
AC004988.1-201ENST00000415237 BAZ1AQ9NRL2 1556 aaPredicted RBP13.03□□□□□ -0.32
AC004988.1-201ENST00000415237 CHRDL2Q6WN34 429 aa13.01□□□□□ -0.33
AC004988.1-201ENST00000415237 EIF4G1Q04637 1599 aaKnown RBP13.01□□□□□ -0.33
AC004988.1-201ENST00000415237 U3KPZ7 1027 aaPredicted RBP12.98□□□□□ -0.33
AC004988.1-201ENST00000415237 RBM42Q9BTD8 480 aaKnown RBP12.91□□□□□ -0.34
AC004988.1-201ENST00000415237 CC2D2AQ9P2K1 1620 aa12.91□□□□□ -0.34
AC004988.1-201ENST00000415237 ATAD2BQ9ULI0 1458 aa12.84□□□□□ -0.35
AC004988.1-201ENST00000415237 PEG3Q9GZU2 1588 aa12.82□□□□□ -0.36
AC004988.1-201ENST00000415237 SMARCA2P51531 1590 aa12.8□□□□□ -0.36
AC004988.1-201ENST00000415237 TOP2AP11388 1531 aaKnown RBP12.8□□□□□ -0.36
AC004988.1-201ENST00000415237 BAZ1BQ9UIG0 1483 aaKnown RBP12.78□□□□□ -0.36
AC004988.1-201ENST00000415237 ABCB7O75027 752 aa12.76□□□□□ -0.37
AC004988.1-201ENST00000415237 TRHP20396 242 aaPredicted RBP12.72□□□□□ -0.37
AC004988.1-201ENST00000415237 NCBP3Q53F19 620 aaKnown RBP12.71□□□□□ -0.37
AC004988.1-201ENST00000415237 ZNF219Q9P2Y4 722 aaPredicted RBP12.71□□□□□ -0.38
AC004988.1-201ENST00000415237 HMGXB3Q12766 1538 aa12.7□□□□□ -0.38
AC004988.1-201ENST00000415237 NCAPD3P42695 1498 aa12.69□□□□□ -0.38
AC004988.1-201ENST00000415237 APLP2Q06481 763 aa12.69□□□□□ -0.38
AC004988.1-201ENST00000415237 CCDC88BA6NC98 1476 aa12.69□□□□□ -0.38
AC004988.1-201ENST00000415237 HAX1O00165 279 aa12.55□□□□□ -0.4
AC004988.1-201ENST00000415237 PLSCR2Q9NRY7 297 aa12.53□□□□□ -0.4
AC004988.1-201ENST00000415237 NESP48681 1621 aa12.51□□□□□ -0.41
AC004988.1-201ENST00000415237 ABCC8Q09428 1581 aa12.49□□□□□ -0.41
AC004988.1-201ENST00000415237 PRDM2Q13029 1718 aa12.49□□□□□ -0.41
AC004988.1-201ENST00000415237 PIP4P2Q8N4L2 257 aa12.43□□□□□ -0.42
AC004988.1-201ENST00000415237 KIF21AQ7Z4S6 1674 aa12.41□□□□□ -0.42
AC004988.1-201ENST00000415237 NPM3O75607 178 aaKnown RBP12.41□□□□□ -0.42
AC004988.1-201ENST00000415237 CFTRP13569 1480 aa12.4□□□□□ -0.42
AC004988.1-201ENST00000415237 CADPSQ9ULU8 1353 aa12.38□□□□□ -0.43
AC004988.1-201ENST00000415237 LAMC3Q9Y6N6 1575 aa12.35□□□□□ -0.43
AC004988.1-201ENST00000415237 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.35□□□□□ -0.43
AC004988.1-201ENST00000415237 HNRNPUL2Q1KMD3 747 aaKnown RBP12.35□□□□□ -0.43
AC004988.1-201ENST00000415237 SYNJ1O43426 1573 aa12.35□□□□□ -0.43
AC004988.1-201ENST00000415237 LHX8Q68G74 356 aa12.34□□□□□ -0.43
AC004988.1-201ENST00000415237 AKT1S1Q96B36 256 aa12.33□□□□□ -0.44
AC004988.1-201ENST00000415237 FANCD2Q9BXW9 1451 aa12.31□□□□□ -0.44
AC004988.1-201ENST00000415237 KCNA4P22459 653 aa12.28□□□□□ -0.44
AC004988.1-201ENST00000415237 TRIM41Q8WV44 630 aa12.28□□□□□ -0.44
AC004988.1-201ENST00000415237 CUX1P39880 1505 aa12.28□□□□□ -0.44
AC004988.1-201ENST00000415237 WRNQ14191 1432 aaPredicted RBP eCLIP12.27□□□□□ -0.45
AC004988.1-201ENST00000415237 CEP164Q9UPV0 1460 aa12.24□□□□□ -0.45
AC004988.1-201ENST00000415237 BIVM-ERCC5R4GMW8 1640 aa12.24□□□□□ -0.45
AC004988.1-201ENST00000415237 TOP2BQ02880 1626 aa12.22□□□□□ -0.45
AC004988.1-201ENST00000415237 FAM9AQ8IZU1 332 aaPredicted RBP12.21□□□□□ -0.45
AC004988.1-201ENST00000415237 URB2Q14146 1524 aaKnown RBP12.21□□□□□ -0.45
AC004988.1-201ENST00000415237 PDS5BQ9NTI5 1447 aa12.2□□□□□ -0.46
AC004988.1-201ENST00000415237 ERCC6Q03468 1493 aa12.2□□□□□ -0.46
AC004988.1-201ENST00000415237 EVX2Q03828 476 aa12.2□□□□□ -0.46
AC004988.1-201ENST00000415237 SAMD1Q6SPF0 538 aaPredicted RBP12.19□□□□□ -0.46
AC004988.1-201ENST00000415237 FXR2P51116 673 aaKnown RBP eCLIP12.18□□□□□ -0.46
AC004988.1-201ENST00000415237 DNMBPQ6XZF7 1577 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms