RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 PRKAR2AP13861 404 aaKnown RBP9.48□□□□□ -0.89
RNU2-28P-201ENST00000410457 VSIG10Q8N0Z9 540 aa9.48□□□□□ -0.89
RNU2-28P-201ENST00000410457 SPDYE1Q8NFV5 336 aaPredicted RBP9.48□□□□□ -0.89
RNU2-28P-201ENST00000410457 GSE1Q14687 1217 aa9.44□□□□□ -0.9
RNU2-28P-201ENST00000410457 PAXIP1Q6ZW49 1069 aaPredicted RBP9.42□□□□□ -0.9
RNU2-28P-201ENST00000410457 NUBP1P53384 320 aa9.4□□□□□ -0.9
RNU2-28P-201ENST00000410457 CLCN6P51797 869 aa9.39□□□□□ -0.91
RNU2-28P-201ENST00000410457 CHGAP10645 457 aaKnown RBP9.38□□□□□ -0.91
RNU2-28P-201ENST00000410457 SPRYD3Q8NCJ5 442 aa9.38□□□□□ -0.91
RNU2-28P-201ENST00000410457 CFAP44Q96MT7 982 aa9.38□□□□□ -0.91
RNU2-28P-201ENST00000410457 PRR29P0C7W0 189 aa9.37□□□□□ -0.91
RNU2-28P-201ENST00000410457 BCANQ96GW7 911 aa9.37□□□□□ -0.91
RNU2-28P-201ENST00000410457 PCDH10Q9P2E7 1040 aa9.37□□□□□ -0.91
RNU2-28P-201ENST00000410457 HS6ST3Q8IZP7 471 aa9.36□□□□□ -0.91
RNU2-28P-201ENST00000410457 CREBZFQ9NS37 354 aa9.36□□□□□ -0.91
RNU2-28P-201ENST00000410457 CLEC11AQ9Y240 323 aa9.36□□□□□ -0.91
RNU2-28P-201ENST00000410457 MNX1P50219 401 aaPredicted RBP9.34□□□□□ -0.91
RNU2-28P-201ENST00000410457 RNF25Q96BH1 459 aaPredicted RBP9.34□□□□□ -0.91
RNU2-28P-201ENST00000410457 DNAJC5Q9H3Z4 198 aa9.34□□□□□ -0.91
RNU2-28P-201ENST00000410457 TAOK2Q9UL54 1235 aa9.34□□□□□ -0.91
RNU2-28P-201ENST00000410457 POTEMA6NI47 508 aa9.33□□□□□ -0.92
RNU2-28P-201ENST00000410457 POTEIP0CG38 1075 aa9.33□□□□□ -0.92
RNU2-28P-201ENST00000410457 FAM212AQ96EL1 285 aa9.33□□□□□ -0.92
RNU2-28P-201ENST00000410457 DCAF8Q5TAQ9 597 aa9.32□□□□□ -0.92
RNU2-28P-201ENST00000410457 KDM2AQ9Y2K7 1162 aa9.32□□□□□ -0.92
RNU2-28P-201ENST00000410457 RIOK3O14730 519 aaKnown RBP9.3□□□□□ -0.92
RNU2-28P-201ENST00000410457 CHRM1P11229 460 aaPredicted RBP9.28□□□□□ -0.92
RNU2-28P-201ENST00000410457 POTEGQ6S5H5 508 aa9.26□□□□□ -0.93
RNU2-28P-201ENST00000410457 TSHZ2Q9NRE2 1034 aa9.26□□□□□ -0.93
RNU2-28P-201ENST00000410457 VGFO15240 615 aaPredicted RBP9.24□□□□□ -0.93
RNU2-28P-201ENST00000410457 RASEFQ8IZ41 740 aa9.24□□□□□ -0.93
RNU2-28P-201ENST00000410457 SGIP1Q9BQI5 828 aa9.22□□□□□ -0.93
RNU2-28P-201ENST00000410457 DCBLD2Q96PD2 775 aa9.21□□□□□ -0.94
RNU2-28P-201ENST00000410457 NKX1-1Q15270 411 aaPredicted RBP9.19□□□□□ -0.94
RNU2-28P-201ENST00000410457 STK25O00506 426 aa9.18□□□□□ -0.94
RNU2-28P-201ENST00000410457 OTUD5Q96G74 571 aa9.18□□□□□ -0.94
RNU2-28P-201ENST00000410457 CD44P16070 742 aaKnown RBP9.16□□□□□ -0.94
RNU2-28P-201ENST00000410457 GTPBP6O43824 516 aaPredicted RBP9.15□□□□□ -0.94
RNU2-28P-201ENST00000410457 RYDENQ9NUL5 291 aaKnown RBP9.14□□□□□ -0.95
RNU2-28P-201ENST00000410457 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.13□□□□□ -0.95
RNU2-28P-201ENST00000410457 PYGBP11216 843 aa9.13□□□□□ -0.95
RNU2-28P-201ENST00000410457 ZFP91Q96JP5 570 aaPredicted RBP9.13□□□□□ -0.95
RNU2-28P-201ENST00000410457 BCL11BQ9C0K0 894 aaPredicted RBP9.12□□□□□ -0.95
RNU2-28P-201ENST00000410457 CHADLQ6NUI6 762 aa9.11□□□□□ -0.95
RNU2-28P-201ENST00000410457 STK24Q9Y6E0 443 aa9.1□□□□□ -0.95
RNU2-28P-201ENST00000410457 FARP1Q9Y4F1 1045 aaPredicted RBP9.09□□□□□ -0.95
RNU2-28P-201ENST00000410457 ZNF467Q7Z7K2 595 aaPredicted RBP9.08□□□□□ -0.96
RNU2-28P-201ENST00000410457 PRKCSHP14314 528 aaPredicted RBP9.06□□□□□ -0.96
RNU2-28P-201ENST00000410457 TSPYL2Q9H2G4 693 aaPredicted RBP9.05□□□□□ -0.96
RNU2-28P-201ENST00000410457 NBR1Q14596 966 aa9.04□□□□□ -0.96
RNU2-28P-201ENST00000410457 ZNF579Q8NAF0 562 aaKnown RBP9.04□□□□□ -0.96
RNU2-28P-201ENST00000410457 PDAP1Q13442 181 aaKnown RBP9.02□□□□□ -0.97
RNU2-28P-201ENST00000410457 TPRNQ4KMQ1 711 aa9.02□□□□□ -0.97
RNU2-28P-201ENST00000410457 CCDC61Q9Y6R9 512 aa9.01□□□□□ -0.97
RNU2-28P-201ENST00000410457 POTEB2H3BUK9 544 aa8.98□□□□□ -0.97
RNU2-28P-201ENST00000410457 PAK3O75914 559 aaPredicted RBP8.96□□□□□ -0.98
RNU2-28P-201ENST00000410457 PCDHB8Q9UN66 801 aa8.96□□□□□ -0.98
RNU2-28P-201ENST00000410457 PCDHB13Q9Y5F0 798 aa8.96□□□□□ -0.98
RNU2-28P-201ENST00000410457 PSEN1P49768 467 aa8.94□□□□□ -0.98
RNU2-28P-201ENST00000410457 MAMSTRQ6ZN01 415 aa8.92□□□□□ -0.98
RNU2-28P-201ENST00000410457 P3H3Q8IVL6 736 aa8.92□□□□□ -0.98
RNU2-28P-201ENST00000410457 IFNL1Q8IU54 200 aa8.89□□□□□ -0.99
RNU2-28P-201ENST00000410457 MFRPQ9BY79 579 aa8.89□□□□□ -0.99
RNU2-28P-201ENST00000410457 LCE2DQ5TA82 110 aaPredicted RBP8.88□□□□□ -0.99
RNU2-28P-201ENST00000410457 KIF12Q96FN5 646 aa8.88□□□□□ -0.99
RNU2-28P-201ENST00000410457 GALR2O43603 387 aaPredicted RBP8.87□□□□□ -0.99
RNU2-28P-201ENST00000410457 ZRANB1Q9UGI0 708 aa8.87□□□□□ -0.99
RNU2-28P-201ENST00000410457 MAP3K13O43283 966 aa8.86□□□□□ -0.99
RNU2-28P-201ENST00000410457 CADPS2Q86UW7 1296 aa8.85□□□□□ -0.99
RNU2-28P-201ENST00000410457 SOX12O15370 315 aa8.84□□□□□ -0.99
RNU2-28P-201ENST00000410457 NLRP6P59044 892 aa8.84□□□□□ -0.99
RNU2-28P-201ENST00000410457 WDR70Q9NW82 654 aa8.84□□□□□ -0.99
RNU2-28P-201ENST00000410457 FBXO22Q8NEZ5 403 aa8.83□□□□□ -1
RNU2-28P-201ENST00000410457 EFCAB3Q8N7B9 438 aa8.82□□□□□ -1
RNU2-28P-201ENST00000410457 CABP2Q9NPB3 220 aa8.81□□□□□ -1
RNU2-28P-201ENST00000410457 KCNV2Q8TDN2 545 aa8.8□□□□□ -1
RNU2-28P-201ENST00000410457 C7P10643 843 aa8.78□□□□□ -1
RNU2-28P-201ENST00000410457 FAM163AQ96GL9 167 aaPredicted RBP8.78□□□□□ -1
RNU2-28P-201ENST00000410457 SCUBE2Q9NQ36 999 aa8.78□□□□□ -1
RNU2-28P-201ENST00000410457 METRNQ9UJH8 293 aa8.78□□□□□ -1
RNU2-28P-201ENST00000410457 PPP1R37O75864 691 aa8.77□□□□□ -1.01
RNU2-28P-201ENST00000410457 SLC39A7Q92504 469 aa8.77□□□□□ -1.01
RNU2-28P-201ENST00000410457 PHF8Q9UPP1 1060 aa8.77□□□□□ -1.01
RNU2-28P-201ENST00000410457 CDAN1Q8IWY9 1227 aa8.74□□□□□ -1.01
RNU2-28P-201ENST00000410457 PHF12Q96QT6 1004 aa8.74□□□□□ -1.01
RNU2-28P-201ENST00000410457 PELP1Q8IZL8 1130 aaKnown RBP8.73□□□□□ -1.01
RNU2-28P-201ENST00000410457 ARHGEF1Q92888 912 aaKnown RBP8.73□□□□□ -1.01
RNU2-28P-201ENST00000410457 POTEJP0CG39 1038 aa8.72□□□□□ -1.01
RNU2-28P-201ENST00000410457 ASTLQ6HA08 431 aaPredicted RBP8.72□□□□□ -1.01
RNU2-28P-201ENST00000410457 GOLGA2Q08379 1002 aa8.7□□□□□ -1.02
RNU2-28P-201ENST00000410457 E2F4Q16254 413 aa8.7□□□□□ -1.02
RNU2-28P-201ENST00000410457 MS4A4AQ96JQ5 239 aa8.7□□□□□ -1.02
RNU2-28P-201ENST00000410457 TMEM106CQ9BVX2 250 aa8.7□□□□□ -1.02
RNU2-28P-201ENST00000410457 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.69□□□□□ -1.02
RNU2-28P-201ENST00000410457 TULP1O00294 542 aaPredicted RBP8.68□□□□□ -1.02
RNU2-28P-201ENST00000410457 NCKAP5LQ9HCH0 1330 aa8.68□□□□□ -1.02
RNU2-28P-201ENST00000410457 PDE4AP27815 886 aa8.67□□□□□ -1.02
RNU2-28P-201ENST00000410457 LMOD2Q6P5Q4 547 aa8.67□□□□□ -1.02
RNU2-28P-201ENST00000410457 MS4A3Q96HJ5 214 aa8.67□□□□□ -1.02
RNU2-28P-201ENST00000410457 MFSD10Q14728 455 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms