RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 RASEFQ8IZ41 740 aa12.26□□□□□ -0.45
LSM5-206ENST00000409987 CHGAP10645 457 aaKnown RBP12.25□□□□□ -0.45
LSM5-206ENST00000409987 SP7Q8TDD2 431 aaPredicted RBP12.25□□□□□ -0.45
LSM5-206ENST00000409987 FAM212AQ96EL1 285 aa12.25□□□□□ -0.45
LSM5-206ENST00000409987 PAXIP1Q6ZW49 1069 aaPredicted RBP12.22□□□□□ -0.45
LSM5-206ENST00000409987 CHADLQ6NUI6 762 aa12.19□□□□□ -0.46
LSM5-206ENST00000409987 CFAP44Q96MT7 982 aa12.19□□□□□ -0.46
LSM5-206ENST00000409987 HS6ST3Q8IZP7 471 aa12.17□□□□□ -0.46
LSM5-206ENST00000409987 RIOK3O14730 519 aaKnown RBP12.16□□□□□ -0.46
LSM5-206ENST00000409987 CHRM1P11229 460 aaPredicted RBP12.15□□□□□ -0.46
LSM5-206ENST00000409987 SPRYD3Q8NCJ5 442 aa12.15□□□□□ -0.46
LSM5-206ENST00000409987 VSIG10Q8N0Z9 540 aa12.13□□□□□ -0.47
LSM5-206ENST00000409987 PYGBP11216 843 aa12.1□□□□□ -0.47
LSM5-206ENST00000409987 FARP1Q9Y4F1 1045 aaPredicted RBP12.1□□□□□ -0.47
LSM5-206ENST00000409987 DNAJC5Q9H3Z4 198 aa12.09□□□□□ -0.47
LSM5-206ENST00000409987 TAOK2Q9UL54 1235 aa12.08□□□□□ -0.48
LSM5-206ENST00000409987 VGFO15240 615 aaPredicted RBP12.07□□□□□ -0.48
LSM5-206ENST00000409987 PRKAR2AP13861 404 aaKnown RBP12.07□□□□□ -0.48
LSM5-206ENST00000409987 FXR2P51116 673 aaKnown RBP eCLIP12.06□□□□□ -0.48
LSM5-206ENST00000409987 KDM2AQ9Y2K7 1162 aa12.06□□□□□ -0.48
LSM5-206ENST00000409987 NKX1-1Q15270 411 aaPredicted RBP12.04□□□□□ -0.48
LSM5-206ENST00000409987 TSPYL2Q9H2G4 693 aaPredicted RBP12.04□□□□□ -0.48
LSM5-206ENST00000409987 TSHZ2Q9NRE2 1034 aa12.04□□□□□ -0.48
LSM5-206ENST00000409987 STK25O00506 426 aa12.03□□□□□ -0.48
LSM5-206ENST00000409987 SGIP1Q9BQI5 828 aa12.02□□□□□ -0.49
LSM5-206ENST00000409987 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12□□□□□ -0.49
LSM5-206ENST00000409987 ZFP91Q96JP5 570 aaPredicted RBP12□□□□□ -0.49
LSM5-206ENST00000409987 BCL11BQ9C0K0 894 aaPredicted RBP11.97□□□□□ -0.49
LSM5-206ENST00000409987 PIP4P2Q8N4L2 257 aa11.96□□□□□ -0.49
LSM5-206ENST00000409987 STK24Q9Y6E0 443 aa11.95□□□□□ -0.5
LSM5-206ENST00000409987 CCDC61Q9Y6R9 512 aa11.95□□□□□ -0.5
LSM5-206ENST00000409987 GTPBP6O43824 516 aaPredicted RBP11.94□□□□□ -0.5
LSM5-206ENST00000409987 ZNF467Q7Z7K2 595 aaPredicted RBP11.91□□□□□ -0.5
LSM5-206ENST00000409987 BCANQ96GW7 911 aa11.89□□□□□ -0.51
LSM5-206ENST00000409987 PCDHB8Q9UN66 801 aa11.88□□□□□ -0.51
LSM5-206ENST00000409987 PCDHB13Q9Y5F0 798 aa11.88□□□□□ -0.51
LSM5-206ENST00000409987 HAX1O00165 279 aa11.86□□□□□ -0.51
LSM5-206ENST00000409987 PDAP1Q13442 181 aaKnown RBP11.85□□□□□ -0.51
LSM5-206ENST00000409987 PAK3O75914 559 aaPredicted RBP11.84□□□□□ -0.51
LSM5-206ENST00000409987 ZNF579Q8NAF0 562 aaKnown RBP11.84□□□□□ -0.51
LSM5-206ENST00000409987 PSEN1P49768 467 aa11.8□□□□□ -0.52
LSM5-206ENST00000409987 KIF12Q96FN5 646 aa11.8□□□□□ -0.52
LSM5-206ENST00000409987 MAP3K13O43283 966 aa11.79□□□□□ -0.52
LSM5-206ENST00000409987 IFNL1Q8IU54 200 aa11.79□□□□□ -0.52
LSM5-206ENST00000409987 RYDENQ9NUL5 291 aaKnown RBP11.79□□□□□ -0.52
LSM5-206ENST00000409987 CD44P16070 742 aaKnown RBP11.75□□□□□ -0.53
LSM5-206ENST00000409987 ZRANB1Q9UGI0 708 aa11.75□□□□□ -0.53
LSM5-206ENST00000409987 PHF12Q96QT6 1004 aa11.71□□□□□ -0.53
LSM5-206ENST00000409987 MFRPQ9BY79 579 aa11.7□□□□□ -0.54
LSM5-206ENST00000409987 EFCAB3Q8N7B9 438 aa11.65□□□□□ -0.54
LSM5-206ENST00000409987 CABP2Q9NPB3 220 aa11.65□□□□□ -0.54
LSM5-206ENST00000409987 C19orf67A6NJJ6 358 aa11.64□□□□□ -0.55
LSM5-206ENST00000409987 PRKCSHP14314 528 aaPredicted RBP11.64□□□□□ -0.55
LSM5-206ENST00000409987 EVX2Q03828 476 aa11.63□□□□□ -0.55
LSM5-206ENST00000409987 CADPS2Q86UW7 1296 aa11.62□□□□□ -0.55
LSM5-206ENST00000409987 FBXO22Q8NEZ5 403 aa11.61□□□□□ -0.55
LSM5-206ENST00000409987 PHF8Q9UPP1 1060 aa11.6□□□□□ -0.55
LSM5-206ENST00000409987 SOX12O15370 315 aa11.59□□□□□ -0.55
LSM5-206ENST00000409987 NBR1Q14596 966 aa11.59□□□□□ -0.55
LSM5-206ENST00000409987 PPP1R37O75864 691 aa11.58□□□□□ -0.56
LSM5-206ENST00000409987 NLRP6P59044 892 aa11.58□□□□□ -0.56
LSM5-206ENST00000409987 MS4A3Q96HJ5 214 aa11.58□□□□□ -0.56
LSM5-206ENST00000409987 TRPC6Q9Y210 931 aa11.57□□□□□ -0.56
LSM5-206ENST00000409987 TPRNQ4KMQ1 711 aa11.54□□□□□ -0.56
LSM5-206ENST00000409987 TMEM106CQ9BVX2 250 aa11.54□□□□□ -0.56
LSM5-206ENST00000409987 MS4A4AQ96JQ5 239 aa11.5□□□□□ -0.57
LSM5-206ENST00000409987 LHX8Q68G74 356 aa11.48□□□□□ -0.57
LSM5-206ENST00000409987 WDR70Q9NW82 654 aa11.47□□□□□ -0.57
LSM5-206ENST00000409987 GOLGA2Q08379 1002 aa11.46□□□□□ -0.57
LSM5-206ENST00000409987 P3H3Q8IVL6 736 aa11.46□□□□□ -0.57
LSM5-206ENST00000409987 TIE1P35590 1138 aa11.45□□□□□ -0.58
LSM5-206ENST00000409987 KCNV2Q8TDN2 545 aa11.45□□□□□ -0.58
LSM5-206ENST00000409987 PLSCR2Q9NRY7 297 aa11.45□□□□□ -0.58
LSM5-206ENST00000409987 TTLL13PA6NNM8 815 aa11.44□□□□□ -0.58
LSM5-206ENST00000409987 MKRN3Q13064 507 aaKnown RBP11.43□□□□□ -0.58
LSM5-206ENST00000409987 GALR2O43603 387 aaPredicted RBP11.42□□□□□ -0.58
LSM5-206ENST00000409987 BMP2KQ9NSY1 1161 aaPredicted RBP11.42□□□□□ -0.58
LSM5-206ENST00000409987 NCKAP5LQ9HCH0 1330 aa11.38□□□□□ -0.59
LSM5-206ENST00000409987 ILDR1Q86SU0 546 aaPredicted RBP11.37□□□□□ -0.59
LSM5-206ENST00000409987 TRIM35Q9UPQ4 493 aa11.36□□□□□ -0.59
LSM5-206ENST00000409987 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.34□□□□□ -0.594e-7■□□□□ 10.5
LSM5-206ENST00000409987 E2F4Q16254 413 aa11.33□□□□□ -0.6
LSM5-206ENST00000409987 CRISPLD2Q9H0B8 497 aa11.33□□□□□ -0.6
LSM5-206ENST00000409987 PDE4AP27815 886 aa11.32□□□□□ -0.6
LSM5-206ENST00000409987 LARP6Q9BRS8 491 aaKnown RBP11.32□□□□□ -0.6
LSM5-206ENST00000409987 CLCN6P51797 869 aa11.31□□□□□ -0.6
LSM5-206ENST00000409987 MFSD10Q14728 455 aa11.31□□□□□ -0.6
LSM5-206ENST00000409987 GABBR2O75899 941 aa11.3□□□□□ -0.6
LSM5-206ENST00000409987 ATN1P54259 1190 aaPredicted RBP11.29□□□□□ -0.6
LSM5-206ENST00000409987 ARHGEF1Q92888 912 aaKnown RBP11.29□□□□□ -0.6
LSM5-206ENST00000409987 DPY19L2Q6NUT2 758 aa11.28□□□□□ -0.6
LSM5-206ENST00000409987 ATMINO43313 823 aaPredicted RBP11.27□□□□□ -0.61
LSM5-206ENST00000409987 DDX27Q96GQ7 796 aaKnown RBP11.25□□□□□ -0.61
LSM5-206ENST00000409987 ASTLQ6HA08 431 aaPredicted RBP11.24□□□□□ -0.61
LSM5-206ENST00000409987 PDCD7Q8N8D1 485 aaKnown RBP11.24□□□□□ -0.61
LSM5-206ENST00000409987 IRX5P78411 483 aaPredicted RBP11.22□□□□□ -0.61
LSM5-206ENST00000409987 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.22□□□□□ -0.61
LSM5-206ENST00000409987 LMOD2Q6P5Q4 547 aa11.21□□□□□ -0.61
LSM5-206ENST00000409987 MICALL2Q8IY33 904 aa11.21□□□□□ -0.61
LSM5-206ENST00000409987 CAMK2BQ13554 666 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms