RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 LRRC9Q6ZRR7 1453 aa22.05■■□□□ 1.12
LYSMD4-204ENST00000409796 MAPKBP1O60336 1514 aa22.01■■□□□ 1.11
LYSMD4-204ENST00000409796 PHLDB1Q86UU1 1377 aa22■■□□□ 1.11
LYSMD4-204ENST00000409796 CFAP43Q8NDM7 1665 aa21.99■■□□□ 1.11
LYSMD4-204ENST00000409796 FANCD2Q9BXW9 1451 aa21.98■■□□□ 1.11
LYSMD4-204ENST00000409796 PCF11O94913 1555 aaKnown RBP21.98■■□□□ 1.11
LYSMD4-204ENST00000409796 FHAD1B1AJZ9 1412 aa21.98■■□□□ 1.11
LYSMD4-204ENST00000409796 SETD5Q9C0A6 1442 aa21.97■■□□□ 1.11
LYSMD4-204ENST00000409796 P3H3Q8IVL6 736 aa21.95■■□□□ 1.1
LYSMD4-204ENST00000409796 RAD54L2Q9Y4B4 1467 aa21.92■■□□□ 1.1
LYSMD4-204ENST00000409796 DNMBPQ6XZF7 1577 aa21.92■■□□□ 1.1
LYSMD4-204ENST00000409796 FAM50AQ14320 339 aaKnown RBP21.91■■□□□ 1.1
LYSMD4-204ENST00000409796 FHOD3Q2V2M9 1422 aa21.89■■□□□ 1.1
LYSMD4-204ENST00000409796 ABCA10Q8WWZ4 1543 aa21.89■■□□□ 1.1
LYSMD4-204ENST00000409796 ATP1B4Q9UN42 357 aaPredicted RBP21.88■■□□□ 1.09
LYSMD4-204ENST00000409796 TOPBP1Q92547 1522 aa21.87■■□□□ 1.09
LYSMD4-204ENST00000409796 POLA1P09884 1462 aaPredicted RBP21.87■■□□□ 1.09
LYSMD4-204ENST00000409796 EFCAB5A4FU69 1503 aa21.85■■□□□ 1.09
LYSMD4-204ENST00000409796 FYCO1Q9BQS8 1478 aa21.84■■□□□ 1.09
LYSMD4-204ENST00000409796 CTTNBP2Q8WZ74 1663 aa21.83■■□□□ 1.09
LYSMD4-204ENST00000409796 CUL7Q14999 1698 aa21.82■■□□□ 1.08
LYSMD4-204ENST00000409796 SIN3AQ96ST3 1273 aa21.82■■□□□ 1.08
LYSMD4-204ENST00000409796 ERCC6Q03468 1493 aa21.82■■□□□ 1.08
LYSMD4-204ENST00000409796 WDR97A6NE52 1622 aa21.82■■□□□ 1.08
LYSMD4-204ENST00000409796 CASKIN1Q8WXD9 1431 aa21.81■■□□□ 1.08
LYSMD4-204ENST00000409796 NESP48681 1621 aa21.81■■□□□ 1.08
LYSMD4-204ENST00000409796 AQRO60306 1485 aaKnown RBP eCLIP21.79■■□□□ 1.08
LYSMD4-204ENST00000409796 SUPT16HQ9Y5B9 1047 aaKnown RBP21.75■■□□□ 1.07
LYSMD4-204ENST00000409796 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.74■■□□□ 1.07
LYSMD4-204ENST00000409796 KCNH8Q96L42 1107 aa21.73■■□□□ 1.07
LYSMD4-204ENST00000409796 FMN1Q68DA7 1419 aa21.7■■□□□ 1.06
LYSMD4-204ENST00000409796 SNAPC4Q5SXM2 1469 aa21.7■■□□□ 1.06
LYSMD4-204ENST00000409796 TIMELESSQ9UNS1 1208 aa21.69■■□□□ 1.06
LYSMD4-204ENST00000409796 FGD6Q6ZV73 1430 aa21.69■■□□□ 1.06
LYSMD4-204ENST00000409796 URB2Q14146 1524 aaKnown RBP21.68■■□□□ 1.06
LYSMD4-204ENST00000409796 DDX10Q13206 875 aaKnown RBP21.67■■□□□ 1.06
LYSMD4-204ENST00000409796 LRRIQ1Q96JM4 1722 aa21.65■■□□□ 1.06
LYSMD4-204ENST00000409796 SAMD9Q5K651 1589 aa21.64■■□□□ 1.05
LYSMD4-204ENST00000409796 PPP1R15AO75807 674 aaPredicted RBP21.63■■□□□ 1.05
LYSMD4-204ENST00000409796 ABCA5Q8WWZ7 1642 aa21.63■■□□□ 1.05
LYSMD4-204ENST00000409796 LAMC3Q9Y6N6 1575 aa21.63■■□□□ 1.05
LYSMD4-204ENST00000409796 MTUS2Q5JR59 1369 aa21.63■■□□□ 1.05
LYSMD4-204ENST00000409796 TDRD9Q8NDG6 1382 aaKnown RBP21.62■■□□□ 1.05
LYSMD4-204ENST00000409796 CCDC18Q5T9S5 1454 aa21.6■■□□□ 1.05
LYSMD4-204ENST00000409796 PTPRKQ15262 1439 aa21.6■■□□□ 1.05
LYSMD4-204ENST00000409796 HIRIP3Q9BW71 556 aaPredicted RBP21.59■■□□□ 1.05
LYSMD4-204ENST00000409796 GAPVD1Q14C86 1478 aa21.57■■□□□ 1.04
LYSMD4-204ENST00000409796 PTPN23Q9H3S7 1636 aa21.57■■□□□ 1.04
LYSMD4-204ENST00000409796 GRIN2BQ13224 1484 aa21.56■■□□□ 1.04
LYSMD4-204ENST00000409796 HFM1A2PYH4 1435 aa21.56■■□□□ 1.04
LYSMD4-204ENST00000409796 NCOA2Q15596 1464 aa21.55■■□□□ 1.04
LYSMD4-204ENST00000409796 UACAQ9BZF9 1416 aa21.53■■□□□ 1.04
LYSMD4-204ENST00000409796 MYOM3Q5VTT5 1437 aa21.53■■□□□ 1.04
LYSMD4-204ENST00000409796 SUPT6HQ7KZ85 1726 aaKnown RBP21.53■■□□□ 1.04
LYSMD4-204ENST00000409796 TONSLQ96HA7 1378 aa21.52■■□□□ 1.04
LYSMD4-204ENST00000409796 THOC2Q8NI27 1593 aaKnown RBP21.52■■□□□ 1.04
LYSMD4-204ENST00000409796 NAIPQ13075 1403 aa21.5■■□□□ 1.03
LYSMD4-204ENST00000409796 EHBP1L1Q8N3D4 1523 aa21.5■■□□□ 1.03
LYSMD4-204ENST00000409796 PDS5BQ9NTI5 1447 aa21.46■■□□□ 1.03
LYSMD4-204ENST00000409796 KIF21AQ7Z4S6 1674 aa21.46■■□□□ 1.03
LYSMD4-204ENST00000409796 UGGT2Q9NYU1 1516 aa21.45■■□□□ 1.02
LYSMD4-204ENST00000409796 MAGI3Q5TCQ9 1506 aa21.45■■□□□ 1.02
LYSMD4-204ENST00000409796 CCER2I3L3R5 266 aa21.44■■□□□ 1.02
LYSMD4-204ENST00000409796 ANP32CO43423 234 aa21.44■■□□□ 1.02
LYSMD4-204ENST00000409796 ARHGEF11O15085 1522 aa21.43■■□□□ 1.02
LYSMD4-204ENST00000409796 TARBP1Q13395 1621 aaKnown RBP21.43■■□□□ 1.02
LYSMD4-204ENST00000409796 TSHZ2Q9NRE2 1034 aa21.41■■□□□ 1.02
LYSMD4-204ENST00000409796 ANP32EQ9BTT0 268 aa21.39■■□□□ 1.01
LYSMD4-204ENST00000409796 KDM5BQ9UGL1 1544 aa21.39■■□□□ 1.01
LYSMD4-204ENST00000409796 PBRM1Q86U86 1689 aa21.37■■□□□ 1.01
LYSMD4-204ENST00000409796 BCANQ96GW7 911 aa21.37■■□□□ 1.01
LYSMD4-204ENST00000409796 FKBP8Q14318 412 aa21.36■■□□□ 1.01
LYSMD4-204ENST00000409796 BCL11AQ9H165 835 aa21.36■■□□□ 1.01
LYSMD4-204ENST00000409796 TCOF1Q13428 1488 aaKnown RBP21.36■■□□□ 1.01
LYSMD4-204ENST00000409796 HECW1Q76N89 1606 aa21.36■■□□□ 1.01
LYSMD4-204ENST00000409796 GCC2Q8IWJ2 1684 aa21.36■■□□□ 1.01
LYSMD4-204ENST00000409796 RRP7BPQ9NSQ0 103 aa21.35■■□□□ 1.01
LYSMD4-204ENST00000409796 TRIM52Q96A61 297 aa21.34■■□□□ 1.01
LYSMD4-204ENST00000409796 CHIC2Q9UKJ5 165 aa21.34■■□□□ 1.01
LYSMD4-204ENST00000409796 IQGAP2Q13576 1575 aa21.32■■□□□ 1
LYSMD4-204ENST00000409796 EPRSP07814 1512 aaKnown RBP21.31■■□□□ 1
LYSMD4-204ENST00000409796 DENND4BO75064 1496 aaPredicted RBP21.3■■□□□ 1
LYSMD4-204ENST00000409796 KDM6BO15054 1643 aa21.3■■□□□ 1
LYSMD4-204ENST00000409796 CDK13Q14004 1512 aaKnown RBP21.29■■□□□ 1
LYSMD4-204ENST00000409796 ADAMTS12P58397 1594 aa21.28■■□□□ 1
LYSMD4-204ENST00000409796 AKNAQ7Z591 1439 aa21.26■□□□□ 0.99
LYSMD4-204ENST00000409796 WDR62O43379 1518 aa21.25■□□□□ 0.99
LYSMD4-204ENST00000409796 NEFLP07196 543 aa21.24■□□□□ 0.99
LYSMD4-204ENST00000409796 MIA2Q96PC5 1412 aa21.23■□□□□ 0.99
LYSMD4-204ENST00000409796 ARID3CA6NKF2 412 aa21.22■□□□□ 0.99
LYSMD4-204ENST00000409796 HSPA5P11021 654 aaKnown RBP21.22■□□□□ 0.99
LYSMD4-204ENST00000409796 MPHOSPH9Q99550 1183 aa21.2■□□□□ 0.98
LYSMD4-204ENST00000409796 WASHC2AQ641Q2 1341 aa21.19■□□□□ 0.98
LYSMD4-204ENST00000409796 MRC2Q9UBG0 1479 aa21.17■□□□□ 0.98
LYSMD4-204ENST00000409796 FOXD1Q16676 465 aa21.14■□□□□ 0.98
LYSMD4-204ENST00000409796 EIF4G2P78344 907 aaKnown RBP eCLIP21.13■□□□□ 0.97
LYSMD4-204ENST00000409796 L3MBTL2Q969R5 705 aa21.13■□□□□ 0.97
LYSMD4-204ENST00000409796 DAPK1P53355 1430 aa21.12■□□□□ 0.97
LYSMD4-204ENST00000409796 HNRNPUQ00839 825 aaKnown RBP eCLIP21.11■□□□□ 0.97
LYSMD4-204ENST00000409796 KIAA0556O60303 1618 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms