RNA–Protein interactions for RNA: ENST00000409432.7

PPM1B-205, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPM1B, Length 3,025 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-205ENST00000409432 RAB3GAP2Q9H2M9 1393 aa21.75■■□□□ 1.07
PPM1B-205ENST00000409432 RRBP1Q9P2E9 1410 aaKnown RBP21.74■■□□□ 1.07
PPM1B-205ENST00000409432 KCNH8Q96L42 1107 aa21.73■■□□□ 1.07
PPM1B-205ENST00000409432 PHLDB1Q86UU1 1377 aa21.71■■□□□ 1.07
PPM1B-205ENST00000409432 FANCD2Q9BXW9 1451 aa21.71■■□□□ 1.07
PPM1B-205ENST00000409432 FHOD3Q2V2M9 1422 aa21.7■■□□□ 1.06
PPM1B-205ENST00000409432 ARID3CA6NKF2 412 aa21.65■■□□□ 1.06
PPM1B-205ENST00000409432 CLSPNQ9HAW4 1339 aa21.65■■□□□ 1.06
PPM1B-205ENST00000409432 TDRD9Q8NDG6 1382 aaKnown RBP21.64■■□□□ 1.05
PPM1B-205ENST00000409432 DDX10Q13206 875 aaKnown RBP21.61■■□□□ 1.05
PPM1B-205ENST00000409432 LRRC9Q6ZRR7 1453 aa21.58■■□□□ 1.05
PPM1B-205ENST00000409432 TIAM1Q13009 1591 aa21.57■■□□□ 1.04
PPM1B-205ENST00000409432 SUPT16HQ9Y5B9 1047 aaKnown RBP21.56■■□□□ 1.04
PPM1B-205ENST00000409432 BCANQ96GW7 911 aa21.55■■□□□ 1.04
PPM1B-205ENST00000409432 SETD5Q9C0A6 1442 aa21.54■■□□□ 1.04
PPM1B-205ENST00000409432 POLA1P09884 1462 aaPredicted RBP21.52■■□□□ 1.04
PPM1B-205ENST00000409432 TOPBP1Q92547 1522 aa21.5■■□□□ 1.03
PPM1B-205ENST00000409432 PCF11O94913 1555 aaKnown RBP21.49■■□□□ 1.03
PPM1B-205ENST00000409432 MAPKBP1O60336 1514 aa21.49■■□□□ 1.03
PPM1B-205ENST00000409432 FHAD1B1AJZ9 1412 aa21.48■■□□□ 1.03
PPM1B-205ENST00000409432 CHIC2Q9UKJ5 165 aa21.47■■□□□ 1.03
PPM1B-205ENST00000409432 TSHZ2Q9NRE2 1034 aa21.45■■□□□ 1.02
PPM1B-205ENST00000409432 BCL11AQ9H165 835 aa21.43■■□□□ 1.02
PPM1B-205ENST00000409432 MTUS2Q5JR59 1369 aa21.43■■□□□ 1.02
PPM1B-205ENST00000409432 PRDM2Q13029 1718 aa21.42■■□□□ 1.02
PPM1B-205ENST00000409432 ANP32EQ9BTT0 268 aa21.41■■□□□ 1.02
PPM1B-205ENST00000409432 WDR97A6NE52 1622 aa21.41■■□□□ 1.02
PPM1B-205ENST00000409432 URB2Q14146 1524 aaKnown RBP21.39■■□□□ 1.02
PPM1B-205ENST00000409432 RRP7BPQ9NSQ0 103 aa21.39■■□□□ 1.01
PPM1B-205ENST00000409432 DNMBPQ6XZF7 1577 aa21.36■■□□□ 1.01
PPM1B-205ENST00000409432 ABCA10Q8WWZ4 1543 aa21.36■■□□□ 1.01
PPM1B-205ENST00000409432 TRIM52Q96A61 297 aa21.35■■□□□ 1.01
PPM1B-205ENST00000409432 PPP1R15AO75807 674 aaPredicted RBP21.31■■□□□ 1
PPM1B-205ENST00000409432 PTPRKQ15262 1439 aa21.3■■□□□ 1
PPM1B-205ENST00000409432 CASKIN1Q8WXD9 1431 aa21.3■■□□□ 1
PPM1B-205ENST00000409432 MAP3K1Q13233 1512 aa21.28■■□□□ 1
PPM1B-205ENST00000409432 TONSLQ96HA7 1378 aa21.27■■□□□ 1
PPM1B-205ENST00000409432 FGD6Q6ZV73 1430 aa21.27■■□□□ 1
PPM1B-205ENST00000409432 FOXD1Q16676 465 aa21.27■■□□□ 1
PPM1B-205ENST00000409432 AQRO60306 1485 aaKnown RBP eCLIP21.26■□□□□ 0.99
PPM1B-205ENST00000409432 FYCO1Q9BQS8 1478 aa21.26■□□□□ 0.99
PPM1B-205ENST00000409432 GAPVD1Q14C86 1478 aa21.25■□□□□ 0.99
PPM1B-205ENST00000409432 FMN1Q68DA7 1419 aa21.24■□□□□ 0.99
PPM1B-205ENST00000409432 PDS5BQ9NTI5 1447 aa21.22■□□□□ 0.99
PPM1B-205ENST00000409432 CFAP43Q8NDM7 1665 aa21.21■□□□□ 0.99
PPM1B-205ENST00000409432 FBLN2P98095 1184 aa21.2■□□□□ 0.98
PPM1B-205ENST00000409432 FKBP8Q14318 412 aa21.2■□□□□ 0.98
PPM1B-205ENST00000409432 CNGB1Q14028 1251 aaPredicted RBP21.19■□□□□ 0.98
PPM1B-205ENST00000409432 CCDC18Q5T9S5 1454 aa21.19■□□□□ 0.98
PPM1B-205ENST00000409432 ANP32CO43423 234 aa21.18■□□□□ 0.98
PPM1B-205ENST00000409432 NCOA2Q15596 1464 aa21.17■□□□□ 0.98
PPM1B-205ENST00000409432 SNAPC4Q5SXM2 1469 aa21.17■□□□□ 0.98
PPM1B-205ENST00000409432 EFCAB5A4FU69 1503 aa21.15■□□□□ 0.98
PPM1B-205ENST00000409432 KIF21AQ7Z4S6 1674 aa21.15■□□□□ 0.98
PPM1B-205ENST00000409432 LAMC3Q9Y6N6 1575 aa21.12■□□□□ 0.97
PPM1B-205ENST00000409432 CTTNBP2Q8WZ74 1663 aa21.12■□□□□ 0.97
PPM1B-205ENST00000409432 CUL7Q14999 1698 aa21.11■□□□□ 0.97
PPM1B-205ENST00000409432 MYOM3Q5VTT5 1437 aa21.1■□□□□ 0.97
PPM1B-205ENST00000409432 NAIPQ13075 1403 aa21.09■□□□□ 0.97
PPM1B-205ENST00000409432 ZNF644Q9H582 1327 aaPredicted RBP21.08■□□□□ 0.97
PPM1B-205ENST00000409432 MAGI3Q5TCQ9 1506 aa21.06■□□□□ 0.96
PPM1B-205ENST00000409432 HFM1A2PYH4 1435 aa21.05■□□□□ 0.96
PPM1B-205ENST00000409432 LRRIQ1Q96JM4 1722 aa21.05■□□□□ 0.96
PPM1B-205ENST00000409432 TIMELESSQ9UNS1 1208 aa21.05■□□□□ 0.96
PPM1B-205ENST00000409432 UACAQ9BZF9 1416 aa21.04■□□□□ 0.96
PPM1B-205ENST00000409432 CDK13Q14004 1512 aaKnown RBP21.04■□□□□ 0.96
PPM1B-205ENST00000409432 ZNF608Q9ULD9 1512 aaPredicted RBP21.04■□□□□ 0.96
PPM1B-205ENST00000409432 IRX6P78412 446 aaPredicted RBP21.04■□□□□ 0.96
PPM1B-205ENST00000409432 GRIN2BQ13224 1484 aa21.04■□□□□ 0.96
PPM1B-205ENST00000409432 ZNF777Q9ULD5 760 aaPredicted RBP21.03■□□□□ 0.96
PPM1B-205ENST00000409432 HSPA5P11021 654 aaKnown RBP21.02■□□□□ 0.96
PPM1B-205ENST00000409432 ABCA5Q8WWZ7 1642 aa21.01■□□□□ 0.95
PPM1B-205ENST00000409432 PTPN23Q9H3S7 1636 aa21.01■□□□□ 0.95
PPM1B-205ENST00000409432 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21■□□□□ 0.95
PPM1B-205ENST00000409432 MPHOSPH9Q99550 1183 aa20.99■□□□□ 0.95
PPM1B-205ENST00000409432 SENP3-EIF4A1A0A087X0R7 540 aa20.99■□□□□ 0.95
PPM1B-205ENST00000409432 RBM19Q9Y4C8 960 aaKnown RBP20.99■□□□□ 0.95
PPM1B-205ENST00000409432 HNRNPUQ00839 825 aaKnown RBP eCLIP20.99■□□□□ 0.95
PPM1B-205ENST00000409432 POLR3GLQ9BT43 218 aa20.99■□□□□ 0.95
PPM1B-205ENST00000409432 L3MBTL2Q969R5 705 aa20.98■□□□□ 0.95
PPM1B-205ENST00000409432 ZNF326Q5BKZ1 582 aaKnown RBP20.97■□□□□ 0.95
PPM1B-205ENST00000409432 SAMD9Q5K651 1589 aa20.96■□□□□ 0.95
PPM1B-205ENST00000409432 NEFLP07196 543 aa20.96■□□□□ 0.95
PPM1B-205ENST00000409432 CCDC184Q52MB2 194 aa20.94■□□□□ 0.94
PPM1B-205ENST00000409432 WASHC2AQ641Q2 1341 aa20.94■□□□□ 0.94
PPM1B-205ENST00000409432 SUPT6HQ7KZ85 1726 aaKnown RBP20.93■□□□□ 0.94
PPM1B-205ENST00000409432 KDM6BO15054 1643 aa20.92■□□□□ 0.94
PPM1B-205ENST00000409432 C11orf95C9JLR9 678 aaPredicted RBP20.92■□□□□ 0.94
PPM1B-205ENST00000409432 TARBP1Q13395 1621 aaKnown RBP20.92■□□□□ 0.94
PPM1B-205ENST00000409432 EPRSP07814 1512 aaKnown RBP20.91■□□□□ 0.94
PPM1B-205ENST00000409432 CHMP7Q8WUX9 453 aaPredicted RBP20.91■□□□□ 0.94
PPM1B-205ENST00000409432 SLC4A1APQ9BWU0 796 aaKnown RBP20.91■□□□□ 0.94
PPM1B-205ENST00000409432 CCER2I3L3R5 266 aa20.9■□□□□ 0.94
PPM1B-205ENST00000409432 EHBP1L1Q8N3D4 1523 aa20.89■□□□□ 0.94
PPM1B-205ENST00000409432 UGGT2Q9NYU1 1516 aa20.89■□□□□ 0.93
PPM1B-205ENST00000409432 EIF4G2P78344 907 aaKnown RBP eCLIP20.88■□□□□ 0.93
PPM1B-205ENST00000409432 FAM9BQ8IZU0 186 aa20.88■□□□□ 0.93
PPM1B-205ENST00000409432 THOC2Q8NI27 1593 aaKnown RBP20.88■□□□□ 0.93
PPM1B-205ENST00000409432 NBPF8Q3BBV2 869 aa20.86■□□□□ 0.93
PPM1B-205ENST00000409432 DENND4BO75064 1496 aaPredicted RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms