RNA–Protein interactions for RNA: ENST00000409432.7

PPM1B-205, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPM1B, Length 3,025 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-205ENST00000409432 NISCHQ9Y2I1 1504 aa30.46■■■□□ 2.47
PPM1B-205ENST00000409432 SHROOM4Q9ULL8 1493 aa26.83■■□□□ 1.89
PPM1B-205ENST00000409432 SUPT5HO00267 1087 aaKnown RBP26.34■■□□□ 1.81
PPM1B-205ENST00000409432 DCAF8L2P0C7V8 631 aa26.28■■□□□ 1.8
PPM1B-205ENST00000409432 ZCCHC6Q5VYS8 1495 aaKnown RBP25.69■■□□□ 1.7
PPM1B-205ENST00000409432 CCDC180Q9P1Z9 1646 aa25.49■■□□□ 1.67
PPM1B-205ENST00000409432 CHIC1Q5VXU3 224 aa25.26■■□□□ 1.63
PPM1B-205ENST00000409432 MYO15BQ96JP2 1530 aa25.16■■□□□ 1.62
PPM1B-205ENST00000409432 LOC105371045A0A1W2PR82 267 aa24.85■■□□□ 1.57
PPM1B-205ENST00000409432 PCGF6Q9BYE7 350 aa24.83■■□□□ 1.56
PPM1B-205ENST00000409432 HRCP23327 699 aa24.65■■□□□ 1.54
PPM1B-205ENST00000409432 ABCC9O60706 1549 aa24.6■■□□□ 1.53
PPM1B-205ENST00000409432 DCAF1Q9Y4B6 1507 aa24.59■■□□□ 1.53
PPM1B-205ENST00000409432 EHMT2Q96KQ7 1210 aa24.59■■□□□ 1.53
PPM1B-205ENST00000409432 PPARGC1BQ86YN6 1023 aaKnown RBP24.57■■□□□ 1.52
PPM1B-205ENST00000409432 SCRIBQ14160 1630 aa24.52■■□□□ 1.52
PPM1B-205ENST00000409432 FAM9AQ8IZU1 332 aaPredicted RBP24.48■■□□□ 1.51
PPM1B-205ENST00000409432 RSF1Q96T23 1441 aaPredicted RBP24.28■■□□□ 1.48
PPM1B-205ENST00000409432 TRIM41Q8WV44 630 aa24.28■■□□□ 1.48
PPM1B-205ENST00000409432 CECR2Q9BXF3 1484 aa24.07■■□□□ 1.44
PPM1B-205ENST00000409432 RB1CC1Q8TDY2 1594 aa24.06■■□□□ 1.44
PPM1B-205ENST00000409432 TRIM26Q12899 539 aaPredicted RBP23.97■■□□□ 1.43
PPM1B-205ENST00000409432 MROH2BQ7Z745 1585 aa23.86■■□□□ 1.41
PPM1B-205ENST00000409432 NACADO15069 1562 aa23.78■■□□□ 1.4
PPM1B-205ENST00000409432 PABPN1Q86U42 306 aaKnown RBP eCLIP23.78■■□□□ 1.4
PPM1B-205ENST00000409432 WIZO95785 1651 aa23.73■■□□□ 1.39
PPM1B-205ENST00000409432 TTBK1Q5TCY1 1321 aaPredicted RBP23.72■■□□□ 1.39
PPM1B-205ENST00000409432 PELP1Q8IZL8 1130 aaKnown RBP23.45■■□□□ 1.34
PPM1B-205ENST00000409432 SCAF1Q9H7N4 1312 aaKnown RBP23.43■■□□□ 1.34
PPM1B-205ENST00000409432 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.38■■□□□ 1.33
PPM1B-205ENST00000409432 ABCC8Q09428 1581 aa23.38■■□□□ 1.33
PPM1B-205ENST00000409432 BAZ1AQ9NRL2 1556 aaPredicted RBP23.32■■□□□ 1.32
PPM1B-205ENST00000409432 CCDC88BA6NC98 1476 aa23.28■■□□□ 1.32
PPM1B-205ENST00000409432 ZEB1P37275 1124 aaPredicted RBP23.25■■□□□ 1.31
PPM1B-205ENST00000409432 UBTFP17480 764 aaKnown RBP23.24■■□□□ 1.31
PPM1B-205ENST00000409432 CCER1Q8TC90 406 aaPredicted RBP23.22■■□□□ 1.31
PPM1B-205ENST00000409432 SOGA1O94964 1423 aa23.21■■□□□ 1.31
PPM1B-205ENST00000409432 UNC13AQ9UPW8 1703 aa23.2■■□□□ 1.3
PPM1B-205ENST00000409432 RANGAP1P46060 587 aaPredicted RBP23.2■■□□□ 1.3
PPM1B-205ENST00000409432 SMARCA4P51532 1647 aa23.15■■□□□ 1.3
PPM1B-205ENST00000409432 RUSC2Q8N2Y8 1516 aa23.13■■□□□ 1.29
PPM1B-205ENST00000409432 TOP2AP11388 1531 aaKnown RBP23.11■■□□□ 1.29
PPM1B-205ENST00000409432 SMARCA2P51531 1590 aa23.08■■□□□ 1.28
PPM1B-205ENST00000409432 EIF4G1Q04637 1599 aaKnown RBP23.07■■□□□ 1.28
PPM1B-205ENST00000409432 CSRNP3Q8WYN3 585 aa23.05■■□□□ 1.28
PPM1B-205ENST00000409432 CEP162Q5TB80 1403 aa23■■□□□ 1.27
PPM1B-205ENST00000409432 BICRAQ9NZM4 1560 aa22.97■■□□□ 1.27
PPM1B-205ENST00000409432 NEUROD1Q13562 356 aa22.87■■□□□ 1.25
PPM1B-205ENST00000409432 HNRNPUL2Q1KMD3 747 aaKnown RBP22.86■■□□□ 1.25
PPM1B-205ENST00000409432 WRNQ14191 1432 aaPredicted RBP eCLIP22.83■■□□□ 1.25
PPM1B-205ENST00000409432 TNIKQ9UKE5 1360 aa22.81■■□□□ 1.24
PPM1B-205ENST00000409432 GTF3C3Q9Y5Q9 886 aa22.79■■□□□ 1.24
PPM1B-205ENST00000409432 ACIN1Q9UKV3 1341 aaKnown RBP22.79■■□□□ 1.24
PPM1B-205ENST00000409432 ATAD2BQ9ULI0 1458 aa22.69■■□□□ 1.22
PPM1B-205ENST00000409432 DIEXFQ68CQ4 756 aaKnown RBP22.68■■□□□ 1.22
PPM1B-205ENST00000409432 BAZ1BQ9UIG0 1483 aaKnown RBP22.68■■□□□ 1.22
PPM1B-205ENST00000409432 GOLGA3Q08378 1498 aa22.67■■□□□ 1.22
PPM1B-205ENST00000409432 SYNJ1O43426 1573 aa22.67■■□□□ 1.22
PPM1B-205ENST00000409432 APLP2Q06481 763 aa22.61■■□□□ 1.21
PPM1B-205ENST00000409432 EEA1Q15075 1411 aa22.6■■□□□ 1.21
PPM1B-205ENST00000409432 CLIP1P30622 1438 aa22.58■■□□□ 1.2
PPM1B-205ENST00000409432 YTHDC1Q96MU7 727 aaKnown RBP22.57■■□□□ 1.2
PPM1B-205ENST00000409432 RAPGEF2Q9Y4G8 1499 aa22.55■■□□□ 1.2
PPM1B-205ENST00000409432 CENPBP07199 599 aaPredicted RBP22.54■■□□□ 1.2
PPM1B-205ENST00000409432 CEP164Q9UPV0 1460 aa22.51■■□□□ 1.19
PPM1B-205ENST00000409432 PEG3Q9GZU2 1588 aa22.44■■□□□ 1.18
PPM1B-205ENST00000409432 MYT1Q01538 1121 aa22.39■■□□□ 1.17
PPM1B-205ENST00000409432 ZNF316A6NFI3 1004 aaPredicted RBP22.39■■□□□ 1.17
PPM1B-205ENST00000409432 ITGAEP38570 1179 aa22.39■■□□□ 1.17
PPM1B-205ENST00000409432 VPS8Q8N3P4 1428 aa22.35■■□□□ 1.17
PPM1B-205ENST00000409432 KANK4Q5T7N3 995 aaPredicted RBP22.35■■□□□ 1.17
PPM1B-205ENST00000409432 KIF21BO75037 1637 aa22.29■■□□□ 1.16
PPM1B-205ENST00000409432 MIER1Q8N108 512 aa22.26■■□□□ 1.15
PPM1B-205ENST00000409432 TOP2BQ02880 1626 aa22.2■■□□□ 1.14
PPM1B-205ENST00000409432 ATP1B4Q9UN42 357 aaPredicted RBP22.2■■□□□ 1.14
PPM1B-205ENST00000409432 P3H3Q8IVL6 736 aa22.18■■□□□ 1.14
PPM1B-205ENST00000409432 CUX1P39880 1505 aa22.15■■□□□ 1.14
PPM1B-205ENST00000409432 NCAPD3P42695 1498 aa22.13■■□□□ 1.13
PPM1B-205ENST00000409432 ARAP1Q96P48 1450 aa22.11■■□□□ 1.13
PPM1B-205ENST00000409432 PRXQ9BXM0 1461 aa22.09■■□□□ 1.13
PPM1B-205ENST00000409432 KIF27Q86VH2 1401 aa22.08■■□□□ 1.13
PPM1B-205ENST00000409432 CUX2O14529 1486 aa22■■□□□ 1.11
PPM1B-205ENST00000409432 BIVM-ERCC5R4GMW8 1640 aa22■■□□□ 1.11
PPM1B-205ENST00000409432 DNAJC5BQ9UF47 199 aa21.99■■□□□ 1.11
PPM1B-205ENST00000409432 CFTRP13569 1480 aa21.98■■□□□ 1.11
PPM1B-205ENST00000409432 DHX57Q6P158 1386 aaKnown RBP21.97■■□□□ 1.11
PPM1B-205ENST00000409432 HMGXB3Q12766 1538 aa21.96■■□□□ 1.11
PPM1B-205ENST00000409432 FAM50AQ14320 339 aaKnown RBP21.94■■□□□ 1.1
PPM1B-205ENST00000409432 ARHGAP35Q9NRY4 1499 aa21.93■■□□□ 1.1
PPM1B-205ENST00000409432 IGF1RP08069 1367 aa21.92■■□□□ 1.1
PPM1B-205ENST00000409432 ERICH3Q5RHP9 1530 aa21.91■■□□□ 1.1
PPM1B-205ENST00000409432 CADPSQ9ULU8 1353 aa21.89■■□□□ 1.09
PPM1B-205ENST00000409432 CARMIL1Q5VZK9 1371 aa21.86■■□□□ 1.09
PPM1B-205ENST00000409432 CCNB3Q8WWL7 1395 aa21.86■■□□□ 1.09
PPM1B-205ENST00000409432 NESP48681 1621 aa21.85■■□□□ 1.09
PPM1B-205ENST00000409432 CC2D2AQ9P2K1 1620 aa21.83■■□□□ 1.09
PPM1B-205ENST00000409432 FGD5Q6ZNL6 1462 aa21.82■■□□□ 1.08
PPM1B-205ENST00000409432 SIN3AQ96ST3 1273 aa21.79■■□□□ 1.08
PPM1B-205ENST00000409432 HIRIP3Q9BW71 556 aaPredicted RBP21.79■■□□□ 1.08
PPM1B-205ENST00000409432 RAD54L2Q9Y4B4 1467 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms