RNA–Protein interactions for RNA: ENST00000407192.5

GET4-202, Transcript of golgi to ER traffic protein 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GET4, Length 4,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GET4-202ENST00000407192 HMGXB3Q12766 1538 aa19.47■□□□□ 0.71
GET4-202ENST00000407192 SALL2Q9Y467 1007 aaPredicted RBP19.44■□□□□ 0.7
GET4-202ENST00000407192 SIN3AQ96ST3 1273 aa19.41■□□□□ 0.7
GET4-202ENST00000407192 CHMP7Q8WUX9 453 aaPredicted RBP19.4■□□□□ 0.7
GET4-202ENST00000407192 CUX2O14529 1486 aa19.38■□□□□ 0.69
GET4-202ENST00000407192 IRX6P78412 446 aaPredicted RBP19.38■□□□□ 0.69
GET4-202ENST00000407192 CC2D2AQ9P2K1 1620 aa19.38■□□□□ 0.69
GET4-202ENST00000407192 SENP3-EIF4A1A0A087X0R7 540 aa19.37■□□□□ 0.69
GET4-202ENST00000407192 KDM2AQ9Y2K7 1162 aa19.36■□□□□ 0.69
GET4-202ENST00000407192 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.35■□□□□ 0.698e-10■□□□□ 9.9
GET4-202ENST00000407192 FANCD2Q9BXW9 1451 aa19.34■□□□□ 0.69
GET4-202ENST00000407192 PEG3Q9GZU2 1588 aa19.33■□□□□ 0.68
GET4-202ENST00000407192 KANK4Q5T7N3 995 aaPredicted RBP19.32■□□□□ 0.68
GET4-202ENST00000407192 BCL11AQ9H165 835 aa19.3■□□□□ 0.68
GET4-202ENST00000407192 CARMIL1Q5VZK9 1371 aa19.29■□□□□ 0.68
GET4-202ENST00000407192 MRS2Q9HD23 443 aa19.28■□□□□ 0.68
GET4-202ENST00000407192 CFTRP13569 1480 aa19.28■□□□□ 0.68
GET4-202ENST00000407192 CHGAP10645 457 aaKnown RBP19.24■□□□□ 0.67
GET4-202ENST00000407192 NPM2Q86SE8 214 aaKnown RBP19.24■□□□□ 0.67
GET4-202ENST00000407192 TSPY4P0CV99 314 aa19.23■□□□□ 0.67
GET4-202ENST00000407192 TSPY10P0CW01 314 aa19.23■□□□□ 0.67
GET4-202ENST00000407192 TMC1Q8TDI8 760 aa19.21■□□□□ 0.67
GET4-202ENST00000407192 EIF4G2P78344 907 aaKnown RBP eCLIP19.21■□□□□ 0.672e-8■■■■■ 42.5
GET4-202ENST00000407192 CCNB3Q8WWL7 1395 aa19.17■□□□□ 0.66
GET4-202ENST00000407192 CANXP27824 592 aaKnown RBP19.17■□□□□ 0.66
GET4-202ENST00000407192 RUSC2Q8N2Y8 1516 aa19.16■□□□□ 0.66
GET4-202ENST00000407192 TDRD9Q8NDG6 1382 aaKnown RBP19.16■□□□□ 0.66
GET4-202ENST00000407192 VPS8Q8N3P4 1428 aa19.15■□□□□ 0.66
GET4-202ENST00000407192 RGL3Q3MIN7 710 aa19.14■□□□□ 0.65
GET4-202ENST00000407192 KCNH8Q96L42 1107 aa19.13■□□□□ 0.65
GET4-202ENST00000407192 SENP3Q9H4L4 574 aaPredicted RBP19.13■□□□□ 0.65
GET4-202ENST00000407192 CCDC136Q96JN2 1154 aa19.08■□□□□ 0.65
GET4-202ENST00000407192 ANP32AP39687 249 aaKnown RBP19.07■□□□□ 0.64
GET4-202ENST00000407192 FGD5Q6ZNL6 1462 aa19.07■□□□□ 0.64
GET4-202ENST00000407192 CFDP1Q9UEE9 299 aaPredicted RBP19.07■□□□□ 0.64
GET4-202ENST00000407192 SUPT16HQ9Y5B9 1047 aaKnown RBP19.07■□□□□ 0.64
GET4-202ENST00000407192 PLEKHD1A6NEE1 506 aa19.05■□□□□ 0.64
GET4-202ENST00000407192 RAPGEF2Q9Y4G8 1499 aa19.05■□□□□ 0.64
GET4-202ENST00000407192 FHAD1B1AJZ9 1412 aa19.03■□□□□ 0.64
GET4-202ENST00000407192 NPM1P06748 294 aaKnown RBP eCLIP19.02■□□□□ 0.64
GET4-202ENST00000407192 NESP48681 1621 aa19.01■□□□□ 0.63
GET4-202ENST00000407192 SLC24A1O60721 1099 aa19.01■□□□□ 0.63
GET4-202ENST00000407192 FOXD1Q16676 465 aa19■□□□□ 0.63
GET4-202ENST00000407192 LAMC3Q9Y6N6 1575 aa18.97■□□□□ 0.63
GET4-202ENST00000407192 PLPPR3Q6T4P5 718 aa18.96■□□□□ 0.63
GET4-202ENST00000407192 SYNJ1O43426 1573 aa18.96■□□□□ 0.63
GET4-202ENST00000407192 TOP2BQ02880 1626 aa18.95■□□□□ 0.62
GET4-202ENST00000407192 IGF1RP08069 1367 aa18.94■□□□□ 0.62
GET4-202ENST00000407192 RAB3GAP2Q9H2M9 1393 aa18.94■□□□□ 0.62
GET4-202ENST00000407192 NBR1Q14596 966 aa18.94■□□□□ 0.62
GET4-202ENST00000407192 DNAJC5BQ9UF47 199 aa18.93■□□□□ 0.62
GET4-202ENST00000407192 GAPVD1Q14C86 1478 aa18.92■□□□□ 0.62
GET4-202ENST00000407192 CARD11Q9BXL7 1154 aa18.92■□□□□ 0.62
GET4-202ENST00000407192 RAD54L2Q9Y4B4 1467 aa18.92■□□□□ 0.62
GET4-202ENST00000407192 STAG3Q9UJ98 1225 aa18.91■□□□□ 0.62
GET4-202ENST00000407192 MRC2Q9UBG0 1479 aa18.91■□□□□ 0.62
GET4-202ENST00000407192 NEFMP07197 916 aa18.91■□□□□ 0.62
GET4-202ENST00000407192 SETD5Q9C0A6 1442 aa18.9■□□□□ 0.62
GET4-202ENST00000407192 WDR43Q15061 677 aaKnown RBP eCLIP18.89■□□□□ 0.62
GET4-202ENST00000407192 TOPBP1Q92547 1522 aa18.89■□□□□ 0.61
GET4-202ENST00000407192 CUX1P39880 1505 aa18.89■□□□□ 0.61
GET4-202ENST00000407192 ZBTB47Q9UFB7 747 aaPredicted RBP18.89■□□□□ 0.61
GET4-202ENST00000407192 CARMIL2Q6F5E8 1435 aa18.87■□□□□ 0.61
GET4-202ENST00000407192 DNMBPQ6XZF7 1577 aa18.85■□□□□ 0.61
GET4-202ENST00000407192 FMN1Q68DA7 1419 aa18.85■□□□□ 0.61
GET4-202ENST00000407192 HSPA5P11021 654 aaKnown RBP18.82■□□□□ 0.6
GET4-202ENST00000407192 POLA1P09884 1462 aaPredicted RBP18.81■□□□□ 0.6
GET4-202ENST00000407192 FHOD3Q2V2M9 1422 aa18.8■□□□□ 0.6
GET4-202ENST00000407192 DCAF11Q8TEB1 546 aa18.79■□□□□ 0.6
GET4-202ENST00000407192 ANP32EQ9BTT0 268 aa18.79■□□□□ 0.6
GET4-202ENST00000407192 ESF1Q9H501 851 aaKnown RBP18.79■□□□□ 0.6
GET4-202ENST00000407192 B4GALNT3Q6L9W6 998 aa18.79■□□□□ 0.6
GET4-202ENST00000407192 IFT140Q96RY7 1462 aa18.78■□□□□ 0.6
GET4-202ENST00000407192 ARHGAP35Q9NRY4 1499 aa18.78■□□□□ 0.6
GET4-202ENST00000407192 PPP1R15AO75807 674 aaPredicted RBP18.78■□□□□ 0.6
GET4-202ENST00000407192 EIF5BO60841 1220 aaKnown RBP18.76■□□□□ 0.59
GET4-202ENST00000407192 ERICH3Q5RHP9 1530 aa18.76■□□□□ 0.59
GET4-202ENST00000407192 KIF21BO75037 1637 aa18.76■□□□□ 0.59
GET4-202ENST00000407192 GRIN2BQ13224 1484 aa18.75■□□□□ 0.59
GET4-202ENST00000407192 DHX57Q6P158 1386 aaKnown RBP18.75■□□□□ 0.59
GET4-202ENST00000407192 TIMELESSQ9UNS1 1208 aa18.75■□□□□ 0.59
GET4-202ENST00000407192 AQRO60306 1485 aaKnown RBP eCLIP18.74■□□□□ 0.595e-7■■■■□ 22.2
GET4-202ENST00000407192 CC2D1BQ5T0F9 858 aaKnown RBP18.74■□□□□ 0.59
GET4-202ENST00000407192 PKD2Q13563 968 aa18.73■□□□□ 0.59
GET4-202ENST00000407192 JPH4Q96JJ6 628 aa18.72■□□□□ 0.59
GET4-202ENST00000407192 MPHOSPH9Q99550 1183 aa18.72■□□□□ 0.59
GET4-202ENST00000407192 NEUROD2Q15784 382 aa18.71■□□□□ 0.59
GET4-202ENST00000407192 PRXQ9BXM0 1461 aa18.71■□□□□ 0.59
GET4-202ENST00000407192 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.7■□□□□ 0.58
GET4-202ENST00000407192 ABCA10Q8WWZ4 1543 aa18.69■□□□□ 0.58
GET4-202ENST00000407192 KNSTRNQ9Y448 316 aa18.69■□□□□ 0.58
GET4-202ENST00000407192 L3MBTL2Q969R5 705 aa18.68■□□□□ 0.58
GET4-202ENST00000407192 TNNT2P45379 298 aaPredicted RBP18.68■□□□□ 0.58
GET4-202ENST00000407192 CCER2I3L3R5 266 aa18.66■□□□□ 0.58
GET4-202ENST00000407192 ARXQ96QS3 562 aa18.66■□□□□ 0.58
GET4-202ENST00000407192 PPP4R2Q9NY27 417 aa18.65■□□□□ 0.58
GET4-202ENST00000407192 BIVM-ERCC5R4GMW8 1640 aa18.64■□□□□ 0.57
GET4-202ENST00000407192 UPF2Q9HAU5 1272 aaKnown RBP18.62■□□□□ 0.57
GET4-202ENST00000407192 PLEKHG5O94827 1062 aa18.61■□□□□ 0.57
GET4-202ENST00000407192 HSP90AA1P07900 732 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms