RNA–Protein interactions for RNA: ENST00000406533.7

KCNMA1-212, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-212ENST00000406533 SUPT16HQ9Y5B9 1047 aaKnown RBP10.86□□□□□ -0.67
KCNMA1-212ENST00000406533 SMARCA4P51532 1647 aa10.86□□□□□ -0.67
KCNMA1-212ENST00000406533 HNRNPUQ00839 825 aaKnown RBP eCLIP10.86□□□□□ -0.67
KCNMA1-212ENST00000406533 MIER1Q8N108 512 aa10.85□□□□□ -0.67
KCNMA1-212ENST00000406533 BECN1Q14457 450 aa10.85□□□□□ -0.67
KCNMA1-212ENST00000406533 HSP90AA2PQ14568 343 aaPredicted RBP10.85□□□□□ -0.67
KCNMA1-212ENST00000406533 L1TD1Q5T7N2 865 aaKnown RBP10.85□□□□□ -0.67
KCNMA1-212ENST00000406533 RBM19Q9Y4C8 960 aaKnown RBP10.84□□□□□ -0.67
KCNMA1-212ENST00000406533 PNNQ9H307 717 aaKnown RBP10.84□□□□□ -0.67
KCNMA1-212ENST00000406533 CADPSQ9ULU8 1353 aa10.83□□□□□ -0.68
KCNMA1-212ENST00000406533 CANXP27824 592 aaKnown RBP10.82□□□□□ -0.68
KCNMA1-212ENST00000406533 TOP2AP11388 1531 aaKnown RBP10.82□□□□□ -0.68
KCNMA1-212ENST00000406533 CEP164Q9UPV0 1460 aa10.81□□□□□ -0.68
KCNMA1-212ENST00000406533 PTMSP20962 102 aa10.81□□□□□ -0.68
KCNMA1-212ENST00000406533 ABCC8Q09428 1581 aa10.81□□□□□ -0.68
KCNMA1-212ENST00000406533 DNTTIP2Q5QJE6 756 aaKnown RBP10.8□□□□□ -0.68
KCNMA1-212ENST00000406533 NCAPD3P42695 1498 aa10.8□□□□□ -0.68
KCNMA1-212ENST00000406533 MROH2BQ7Z745 1585 aa10.8□□□□□ -0.68
KCNMA1-212ENST00000406533 AMER1Q5JTC6 1135 aaPredicted RBP10.79□□□□□ -0.68
KCNMA1-212ENST00000406533 GOLGA6L22H0YM25 854 aa10.78□□□□□ -0.68
KCNMA1-212ENST00000406533 WRNQ14191 1432 aaPredicted RBP eCLIP10.78□□□□□ -0.68
KCNMA1-212ENST00000406533 CC2D2AQ9P2K1 1620 aa10.78□□□□□ -0.68
KCNMA1-212ENST00000406533 TNNT3P45378 269 aaPredicted RBP10.77□□□□□ -0.69
KCNMA1-212ENST00000406533 TSHZ2Q9NRE2 1034 aa10.77□□□□□ -0.69
KCNMA1-212ENST00000406533 KIF27Q86VH2 1401 aa10.76□□□□□ -0.69
KCNMA1-212ENST00000406533 LAS1LQ9Y4W2 734 aaKnown RBP10.76□□□□□ -0.69
KCNMA1-212ENST00000406533 PTMAP06454 111 aaKnown RBP10.75□□□□□ -0.69
KCNMA1-212ENST00000406533 ESF1Q9H501 851 aaKnown RBP10.75□□□□□ -0.69
KCNMA1-212ENST00000406533 TRIM52Q96A61 297 aa10.75□□□□□ -0.69
KCNMA1-212ENST00000406533 EEA1Q15075 1411 aa10.73□□□□□ -0.69
KCNMA1-212ENST00000406533 A0A0U1RQG5 324 aaPredicted RBP10.73□□□□□ -0.69
KCNMA1-212ENST00000406533 PPP4R2Q9NY27 417 aa10.73□□□□□ -0.69
KCNMA1-212ENST00000406533 MSNP26038 577 aaKnown RBP10.72□□□□□ -0.69
KCNMA1-212ENST00000406533 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.71□□□□□ -0.69
KCNMA1-212ENST00000406533 HMGXB3Q12766 1538 aa10.71□□□□□ -0.7
KCNMA1-212ENST00000406533 CCDC88BA6NC98 1476 aa10.69□□□□□ -0.7
KCNMA1-212ENST00000406533 FANCD2Q9BXW9 1451 aa10.69□□□□□ -0.7
KCNMA1-212ENST00000406533 CHAF1AQ13111 956 aaPredicted RBP10.69□□□□□ -0.7
KCNMA1-212ENST00000406533 USP35Q9P2H5 1018 aa10.69□□□□□ -0.7
KCNMA1-212ENST00000406533 IRX6P78412 446 aaPredicted RBP10.68□□□□□ -0.7
KCNMA1-212ENST00000406533 ANO8Q9HCE9 1232 aaPredicted RBP10.68□□□□□ -0.7
KCNMA1-212ENST00000406533 DDX10Q13206 875 aaKnown RBP10.67□□□□□ -0.7
KCNMA1-212ENST00000406533 SOGA1O94964 1423 aa10.67□□□□□ -0.7
KCNMA1-212ENST00000406533 ARID4BQ4LE39 1312 aaPredicted RBP10.65□□□□□ -0.7
KCNMA1-212ENST00000406533 WIZO95785 1651 aa10.65□□□□□ -0.71
KCNMA1-212ENST00000406533 BICRAQ9NZM4 1560 aa10.64□□□□□ -0.71
KCNMA1-212ENST00000406533 P3H3Q8IVL6 736 aa10.64□□□□□ -0.71
KCNMA1-212ENST00000406533 FAM9BQ8IZU0 186 aa10.64□□□□□ -0.71
KCNMA1-212ENST00000406533 TRHP20396 242 aaPredicted RBP10.62□□□□□ -0.71
KCNMA1-212ENST00000406533 CARMIL2Q6F5E8 1435 aa10.62□□□□□ -0.71
KCNMA1-212ENST00000406533 OSCARQ8IYS5 282 aa10.62□□□□□ -0.71
KCNMA1-212ENST00000406533 UBE2Q2Q8WVN8 375 aa10.62□□□□□ -0.71
KCNMA1-212ENST00000406533 CUX2O14529 1486 aa10.62□□□□□ -0.71
KCNMA1-212ENST00000406533 MRC2Q9UBG0 1479 aa10.61□□□□□ -0.71
KCNMA1-212ENST00000406533 APPP05067 770 aa10.6□□□□□ -0.71
KCNMA1-212ENST00000406533 FAM50AQ14320 339 aaKnown RBP10.59□□□□□ -0.71
KCNMA1-212ENST00000406533 TIMELESSQ9UNS1 1208 aa10.58□□□□□ -0.72
KCNMA1-212ENST00000406533 PLEKHD1A6NEE1 506 aa10.58□□□□□ -0.72
KCNMA1-212ENST00000406533 ARID3CA6NKF2 412 aa10.57□□□□□ -0.72
KCNMA1-212ENST00000406533 CALRP27797 417 aaKnown RBP10.57□□□□□ -0.72
KCNMA1-212ENST00000406533 SLC4A1APQ9BWU0 796 aaKnown RBP10.57□□□□□ -0.72
KCNMA1-212ENST00000406533 IPO9Q96P70 1041 aaKnown RBP10.56□□□□□ -0.72
KCNMA1-212ENST00000406533 FANCIQ9NVI1 1328 aa10.56□□□□□ -0.72
KCNMA1-212ENST00000406533 MRS2Q9HD23 443 aa10.56□□□□□ -0.72
KCNMA1-212ENST00000406533 LAMC3Q9Y6N6 1575 aa10.55□□□□□ -0.72
KCNMA1-212ENST00000406533 ZNF777Q9ULD5 760 aaPredicted RBP10.55□□□□□ -0.72
KCNMA1-212ENST00000406533 CARMIL1Q5VZK9 1371 aa10.54□□□□□ -0.72
KCNMA1-212ENST00000406533 PDE4CQ08493 712 aa10.54□□□□□ -0.72
KCNMA1-212ENST00000406533 GOLGA3Q08378 1498 aa10.53□□□□□ -0.72
KCNMA1-212ENST00000406533 MAP7D2Q96T17 732 aa10.53□□□□□ -0.72
KCNMA1-212ENST00000406533 SALL2Q9Y467 1007 aaPredicted RBP10.53□□□□□ -0.72
KCNMA1-212ENST00000406533 GOLGA6L3A6NEY3 463 aa10.53□□□□□ -0.72
KCNMA1-212ENST00000406533 NRDCO43847 1150 aa10.52□□□□□ -0.72
KCNMA1-212ENST00000406533 GSE1Q14687 1217 aa10.52□□□□□ -0.73
KCNMA1-212ENST00000406533 TMC1Q8TDI8 760 aa10.52□□□□□ -0.73
KCNMA1-212ENST00000406533 UNC13AQ9UPW8 1703 aa10.52□□□□□ -0.73
KCNMA1-212ENST00000406533 IFT140Q96RY7 1462 aa10.52□□□□□ -0.73
KCNMA1-212ENST00000406533 KIAA2012Q0VF49 1180 aa10.51□□□□□ -0.73
KCNMA1-212ENST00000406533 ARID3AQ99856 593 aa10.51□□□□□ -0.73
KCNMA1-212ENST00000406533 TDRD9Q8NDG6 1382 aaKnown RBP10.5□□□□□ -0.73
KCNMA1-212ENST00000406533 GOLGA6L6A8MZA4 724 aa10.5□□□□□ -0.73
KCNMA1-212ENST00000406533 MTERF4Q7Z6M4 381 aaKnown RBP10.5□□□□□ -0.73
KCNMA1-212ENST00000406533 DNAJC5BQ9UF47 199 aa10.49□□□□□ -0.73
KCNMA1-212ENST00000406533 TONSLQ96HA7 1378 aa10.49□□□□□ -0.73
KCNMA1-212ENST00000406533 MYH16Q9H6N6 1097 aa10.49□□□□□ -0.73
KCNMA1-212ENST00000406533 B4GALNT3Q6L9W6 998 aa10.48□□□□□ -0.73
KCNMA1-212ENST00000406533 CFTRP13569 1480 aa10.48□□□□□ -0.73
KCNMA1-212ENST00000406533 MTUS2Q5JR59 1369 aa10.48□□□□□ -0.73
KCNMA1-212ENST00000406533 KCNH8Q96L42 1107 aa10.48□□□□□ -0.73
KCNMA1-212ENST00000406533 STAG3Q9UJ98 1225 aa10.47□□□□□ -0.73
KCNMA1-212ENST00000406533 TSPY4P0CV99 314 aa10.47□□□□□ -0.73
KCNMA1-212ENST00000406533 TSPY10P0CW01 314 aa10.47□□□□□ -0.73
KCNMA1-212ENST00000406533 CLIP1P30622 1438 aa10.46□□□□□ -0.74
KCNMA1-212ENST00000406533 RRP9O43818 475 aaKnown RBP10.45□□□□□ -0.74
KCNMA1-212ENST00000406533 ZNF771Q7L3S4 317 aaPredicted RBP10.45□□□□□ -0.74
KCNMA1-212ENST00000406533 TCERG1O14776 1098 aaKnown RBP10.44□□□□□ -0.74
KCNMA1-212ENST00000406533 SETQ01105 290 aaPredicted RBP10.44□□□□□ -0.74
KCNMA1-212ENST00000406533 GOLGA6L1Q8N7Z2 621 aa10.44□□□□□ -0.74
KCNMA1-212ENST00000406533 ZRSR1Q15695 479 aaKnown RBP10.44□□□□□ -0.74
KCNMA1-212ENST00000406533 PLCB2Q00722 1185 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms