RNA–Protein interactions for RNA: ENST00000406397.1

VSNL1-203, Transcript of visinin like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VSNL1, Length 2,725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSNL1-203ENST00000406397 NCBP3Q53F19 620 aaKnown RBP8.17□□□□□ -1.1
VSNL1-203ENST00000406397 RAD54L2Q9Y4B4 1467 aa8.17□□□□□ -1.1
VSNL1-203ENST00000406397 WDR62O43379 1518 aa8.17□□□□□ -1.1
VSNL1-203ENST00000406397 POLA1P09884 1462 aaPredicted RBP8.17□□□□□ -1.1
VSNL1-203ENST00000406397 SOGA1O94964 1423 aa8.15□□□□□ -1.11
VSNL1-203ENST00000406397 RUSC2Q8N2Y8 1516 aa8.14□□□□□ -1.11
VSNL1-203ENST00000406397 SUPT16HQ9Y5B9 1047 aaKnown RBP8.14□□□□□ -1.11
VSNL1-203ENST00000406397 CUX2O14529 1486 aa8.13□□□□□ -1.11
VSNL1-203ENST00000406397 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.13□□□□□ -1.11
VSNL1-203ENST00000406397 TDRD9Q8NDG6 1382 aaKnown RBP8.12□□□□□ -1.11
VSNL1-203ENST00000406397 CCER1Q8TC90 406 aaPredicted RBP8.1□□□□□ -1.11
VSNL1-203ENST00000406397 ZNF608Q9ULD9 1512 aaPredicted RBP8.1□□□□□ -1.11
VSNL1-203ENST00000406397 AQRO60306 1485 aaKnown RBP eCLIP8.09□□□□□ -1.113e-6■■■□□ 19
VSNL1-203ENST00000406397 TARBP1Q13395 1621 aaKnown RBP8.09□□□□□ -1.11
VSNL1-203ENST00000406397 RTN4Q9NQC3 1192 aaKnown RBP8.09□□□□□ -1.11
VSNL1-203ENST00000406397 IFT140Q96RY7 1462 aa8.08□□□□□ -1.12
VSNL1-203ENST00000406397 MIER1Q8N108 512 aa8.08□□□□□ -1.12
VSNL1-203ENST00000406397 ABCA10Q8WWZ4 1543 aa8.07□□□□□ -1.12
VSNL1-203ENST00000406397 KIF27Q86VH2 1401 aa8.07□□□□□ -1.12
VSNL1-203ENST00000406397 CNKSR2Q8WXI2 1034 aa8.07□□□□□ -1.12
VSNL1-203ENST00000406397 WDR97A6NE52 1622 aa8.06□□□□□ -1.12
VSNL1-203ENST00000406397 GAPVD1Q14C86 1478 aa8.05□□□□□ -1.12
VSNL1-203ENST00000406397 SALL2Q9Y467 1007 aaPredicted RBP8.04□□□□□ -1.12
VSNL1-203ENST00000406397 ILDR1Q86SU0 546 aaPredicted RBP8.04□□□□□ -1.12
VSNL1-203ENST00000406397 EIF4G3O43432 1585 aaKnown RBP8.04□□□□□ -1.12
VSNL1-203ENST00000406397 ZNF316A6NFI3 1004 aaPredicted RBP8.03□□□□□ -1.12
VSNL1-203ENST00000406397 UBE2Q2Q8WVN8 375 aa8.03□□□□□ -1.12
VSNL1-203ENST00000406397 ABCA5Q8WWZ7 1642 aa8.03□□□□□ -1.12
VSNL1-203ENST00000406397 IGF1RP08069 1367 aa8.02□□□□□ -1.13
VSNL1-203ENST00000406397 CCDC136Q96JN2 1154 aa8.02□□□□□ -1.13
VSNL1-203ENST00000406397 CLSPNQ9HAW4 1339 aa8.01□□□□□ -1.13
VSNL1-203ENST00000406397 FBLN2P98095 1184 aa8.01□□□□□ -1.13
VSNL1-203ENST00000406397 EEA1Q15075 1411 aa8□□□□□ -1.13
VSNL1-203ENST00000406397 PBRM1Q86U86 1689 aa8□□□□□ -1.13
VSNL1-203ENST00000406397 GRIN2BQ13224 1484 aa7.99□□□□□ -1.13
VSNL1-203ENST00000406397 SNAPC4Q5SXM2 1469 aa7.99□□□□□ -1.13
VSNL1-203ENST00000406397 SLC24A1O60721 1099 aa7.99□□□□□ -1.13
VSNL1-203ENST00000406397 CARMIL1Q5VZK9 1371 aa7.99□□□□□ -1.13
VSNL1-203ENST00000406397 RBM19Q9Y4C8 960 aaKnown RBP7.99□□□□□ -1.13
VSNL1-203ENST00000406397 RANGAP1P46060 587 aaPredicted RBP7.98□□□□□ -1.13
VSNL1-203ENST00000406397 RAPGEF2Q9Y4G8 1499 aa7.98□□□□□ -1.13
VSNL1-203ENST00000406397 UBTFP17480 764 aaKnown RBP7.97□□□□□ -1.13
VSNL1-203ENST00000406397 FOXD4L1Q9NU39 408 aa7.97□□□□□ -1.13
VSNL1-203ENST00000406397 ERICH3Q5RHP9 1530 aa7.97□□□□□ -1.13
VSNL1-203ENST00000406397 EIF5BO60841 1220 aaKnown RBP7.97□□□□□ -1.13
VSNL1-203ENST00000406397 CHMP7Q8WUX9 453 aaPredicted RBP7.96□□□□□ -1.13
VSNL1-203ENST00000406397 PRXQ9BXM0 1461 aa7.95□□□□□ -1.14
VSNL1-203ENST00000406397 DEKP35659 375 aaKnown RBP7.95□□□□□ -1.14
VSNL1-203ENST00000406397 ADAMTS12P58397 1594 aa7.94□□□□□ -1.14
VSNL1-203ENST00000406397 FHAD1B1AJZ9 1412 aa7.94□□□□□ -1.14
VSNL1-203ENST00000406397 CUL7Q14999 1698 aa7.94□□□□□ -1.14
VSNL1-203ENST00000406397 MAGI1Q96QZ7 1491 aaPredicted RBP7.93□□□□□ -1.14
VSNL1-203ENST00000406397 SLC4A2P04920 1241 aa7.93□□□□□ -1.14
VSNL1-203ENST00000406397 BCANQ96GW7 911 aa7.93□□□□□ -1.14
VSNL1-203ENST00000406397 GOLGA3Q08378 1498 aa7.93□□□□□ -1.14
VSNL1-203ENST00000406397 KIF21BO75037 1637 aa7.92□□□□□ -1.14
VSNL1-203ENST00000406397 SYNJ2O15056 1496 aa7.92□□□□□ -1.14
VSNL1-203ENST00000406397 GRIN2AQ12879 1464 aa7.91□□□□□ -1.14
VSNL1-203ENST00000406397 CHD1O14646 1710 aa7.91□□□□□ -1.14
VSNL1-203ENST00000406397 POTEHQ6S545 545 aa7.9□□□□□ -1.14
VSNL1-203ENST00000406397 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.9□□□□□ -1.15
VSNL1-203ENST00000406397 PLEKHG5O94827 1062 aa7.88□□□□□ -1.15
VSNL1-203ENST00000406397 ERICH6BQ5W0A0 696 aa7.87□□□□□ -1.15
VSNL1-203ENST00000406397 CEP170Q5SW79 1584 aa7.87□□□□□ -1.15
VSNL1-203ENST00000406397 P3H3Q8IVL6 736 aa7.87□□□□□ -1.15
VSNL1-203ENST00000406397 TNIKQ9UKE5 1360 aa7.86□□□□□ -1.15
VSNL1-203ENST00000406397 MYT1LQ9UL68 1186 aa7.86□□□□□ -1.15
VSNL1-203ENST00000406397 PKNOX2Q96KN3 472 aa7.85□□□□□ -1.15
VSNL1-203ENST00000406397 FKBP8Q14318 412 aa7.85□□□□□ -1.15
VSNL1-203ENST00000406397 CEP162Q5TB80 1403 aa7.84□□□□□ -1.15
VSNL1-203ENST00000406397 CTTNBP2Q8WZ74 1663 aa7.84□□□□□ -1.15
VSNL1-203ENST00000406397 OSCARQ8IYS5 282 aa7.84□□□□□ -1.15
VSNL1-203ENST00000406397 NUP160Q12769 1436 aa7.84□□□□□ -1.15
VSNL1-203ENST00000406397 IQGAP2Q13576 1575 aa7.82□□□□□ -1.16
VSNL1-203ENST00000406397 KIAA0586Q9BVV6 1533 aa7.82□□□□□ -1.16
VSNL1-203ENST00000406397 IL27Q8NEV9 243 aa7.82□□□□□ -1.16
VSNL1-203ENST00000406397 JPH4Q96JJ6 628 aa7.82□□□□□ -1.16
VSNL1-203ENST00000406397 FANCIQ9NVI1 1328 aa7.82□□□□□ -1.16
VSNL1-203ENST00000406397 CLIP1P30622 1438 aa7.82□□□□□ -1.16
VSNL1-203ENST00000406397 ITGAEP38570 1179 aa7.81□□□□□ -1.16
VSNL1-203ENST00000406397 DAXXQ9UER7 740 aaPredicted RBP7.81□□□□□ -1.16
VSNL1-203ENST00000406397 ATF5Q9Y2D1 282 aaPredicted RBP7.79□□□□□ -1.16
VSNL1-203ENST00000406397 FHOD3Q2V2M9 1422 aa7.79□□□□□ -1.16
VSNL1-203ENST00000406397 ARHGAP35Q9NRY4 1499 aa7.79□□□□□ -1.16
VSNL1-203ENST00000406397 CLASP1Q7Z460 1538 aa7.78□□□□□ -1.16
VSNL1-203ENST00000406397 PRG4Q92954 1404 aaPredicted RBP7.78□□□□□ -1.16
VSNL1-203ENST00000406397 RNF216Q9NWF9 866 aaPredicted RBP7.78□□□□□ -1.16
VSNL1-203ENST00000406397 ERCC6L2Q5T890 1561 aa7.78□□□□□ -1.16
VSNL1-203ENST00000406397 ARAP1Q96P48 1450 aa7.77□□□□□ -1.17
VSNL1-203ENST00000406397 PODXL2Q9NZ53 605 aa7.77□□□□□ -1.17
VSNL1-203ENST00000406397 ATP1B4Q9UN42 357 aaPredicted RBP7.77□□□□□ -1.17
VSNL1-203ENST00000406397 DMRT2Q9Y5R5 561 aa7.76□□□□□ -1.17
VSNL1-203ENST00000406397 DISP1Q96F81 1524 aa7.76□□□□□ -1.17
VSNL1-203ENST00000406397 ARID3CA6NKF2 412 aa7.76□□□□□ -1.17
VSNL1-203ENST00000406397 UGGT2Q9NYU1 1516 aa7.76□□□□□ -1.17
VSNL1-203ENST00000406397 NBR1Q14596 966 aa7.75□□□□□ -1.17
VSNL1-203ENST00000406397 KIAA0556O60303 1618 aa7.74□□□□□ -1.17
VSNL1-203ENST00000406397 SAMD9Q5K651 1589 aa7.74□□□□□ -1.17
VSNL1-203ENST00000406397 CARMIL2Q6F5E8 1435 aa7.74□□□□□ -1.17
VSNL1-203ENST00000406397 SHROOM2Q13796 1616 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms