RNA–Protein interactions for RNA: ENST00000404771.8

KCNMA1-210, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-210ENST00000404771 SIN3AQ96ST3 1273 aa18.91■□□□□ 0.62
KCNMA1-210ENST00000404771 ATAD2BQ9ULI0 1458 aa18.89■□□□□ 0.61
KCNMA1-210ENST00000404771 TSPY4P0CV99 314 aa18.88■□□□□ 0.61
KCNMA1-210ENST00000404771 TSPY10P0CW01 314 aa18.88■□□□□ 0.61
KCNMA1-210ENST00000404771 SENP3-EIF4A1A0A087X0R7 540 aa18.85■□□□□ 0.61
KCNMA1-210ENST00000404771 NPM1P06748 294 aaKnown RBP eCLIP18.84■□□□□ 0.61
KCNMA1-210ENST00000404771 TOP2AP11388 1531 aaKnown RBP18.82■□□□□ 0.6
KCNMA1-210ENST00000404771 PLEKHD1A6NEE1 506 aa18.82■□□□□ 0.6
KCNMA1-210ENST00000404771 ERCC6Q03468 1493 aa18.81■□□□□ 0.6
KCNMA1-210ENST00000404771 SALL2Q9Y467 1007 aaPredicted RBP18.81■□□□□ 0.6
KCNMA1-210ENST00000404771 SMARCA2P51531 1590 aa18.79■□□□□ 0.6
KCNMA1-210ENST00000404771 FAM9BQ8IZU0 186 aa18.78■□□□□ 0.6
KCNMA1-210ENST00000404771 RGL3Q3MIN7 710 aa18.78■□□□□ 0.6
KCNMA1-210ENST00000404771 CFDP1Q9UEE9 299 aaPredicted RBP18.78■□□□□ 0.6
KCNMA1-210ENST00000404771 SMARCA4P51532 1647 aa18.78■□□□□ 0.6
KCNMA1-210ENST00000404771 FKBP8Q14318 412 aa18.77■□□□□ 0.6
KCNMA1-210ENST00000404771 CADPSQ9ULU8 1353 aa18.75■□□□□ 0.59
KCNMA1-210ENST00000404771 RAPGEF2Q9Y4G8 1499 aa18.73■□□□□ 0.59
KCNMA1-210ENST00000404771 HNRNPUQ00839 825 aaKnown RBP eCLIP18.72■□□□□ 0.59
KCNMA1-210ENST00000404771 PRKCSHP14314 528 aaPredicted RBP18.71■□□□□ 0.59
KCNMA1-210ENST00000404771 EIF4G1Q04637 1599 aaKnown RBP18.7■□□□□ 0.58
KCNMA1-210ENST00000404771 VPS8Q8N3P4 1428 aa18.69■□□□□ 0.58
KCNMA1-210ENST00000404771 CCNB3Q8WWL7 1395 aa18.68■□□□□ 0.58
KCNMA1-210ENST00000404771 FOXD1Q16676 465 aa18.66■□□□□ 0.58
KCNMA1-210ENST00000404771 IRX6P78412 446 aaPredicted RBP18.65■□□□□ 0.58
KCNMA1-210ENST00000404771 STAG3Q9UJ98 1225 aa18.62■□□□□ 0.57
KCNMA1-210ENST00000404771 DNAJC5BQ9UF47 199 aa18.59■□□□□ 0.57
KCNMA1-210ENST00000404771 PDS5BQ9NTI5 1447 aa18.59■□□□□ 0.57
KCNMA1-210ENST00000404771 EIF4G2P78344 907 aaKnown RBP eCLIP18.58■□□□□ 0.56
KCNMA1-210ENST00000404771 ESF1Q9H501 851 aaKnown RBP18.58■□□□□ 0.56
KCNMA1-210ENST00000404771 FHOD3Q2V2M9 1422 aa18.57■□□□□ 0.56
KCNMA1-210ENST00000404771 MRS2Q9HD23 443 aa18.56■□□□□ 0.56
KCNMA1-210ENST00000404771 DAXXQ9UER7 740 aaPredicted RBP18.55■□□□□ 0.56
KCNMA1-210ENST00000404771 FHAD1B1AJZ9 1412 aa18.54■□□□□ 0.56
KCNMA1-210ENST00000404771 TMC1Q8TDI8 760 aa18.52■□□□□ 0.56
KCNMA1-210ENST00000404771 SLC24A1O60721 1099 aa18.52■□□□□ 0.55
KCNMA1-210ENST00000404771 FANCD2Q9BXW9 1451 aa18.49■□□□□ 0.55
KCNMA1-210ENST00000404771 RAD54L2Q9Y4B4 1467 aa18.47■□□□□ 0.55
KCNMA1-210ENST00000404771 RBM19Q9Y4C8 960 aaKnown RBP18.46■□□□□ 0.55
KCNMA1-210ENST00000404771 IGF1RP08069 1367 aa18.45■□□□□ 0.54
KCNMA1-210ENST00000404771 RAB3GAP2Q9H2M9 1393 aa18.44■□□□□ 0.54
KCNMA1-210ENST00000404771 JPH4Q96JJ6 628 aa18.42■□□□□ 0.54
KCNMA1-210ENST00000404771 PLEKHG5O94827 1062 aa18.41■□□□□ 0.54
KCNMA1-210ENST00000404771 CARD11Q9BXL7 1154 aa18.41■□□□□ 0.54
KCNMA1-210ENST00000404771 NPM2Q86SE8 214 aaKnown RBP18.4■□□□□ 0.54
KCNMA1-210ENST00000404771 CANXP27824 592 aaKnown RBP18.4■□□□□ 0.54
KCNMA1-210ENST00000404771 RTL5Q5HYW3 569 aaPredicted RBP18.4■□□□□ 0.54
KCNMA1-210ENST00000404771 DCAF11Q8TEB1 546 aa18.39■□□□□ 0.53
KCNMA1-210ENST00000404771 SETD5Q9C0A6 1442 aa18.38■□□□□ 0.53
KCNMA1-210ENST00000404771 NESP48681 1621 aa18.37■□□□□ 0.53
KCNMA1-210ENST00000404771 NCAPD3P42695 1498 aa18.37■□□□□ 0.53
KCNMA1-210ENST00000404771 FGD5Q6ZNL6 1462 aa18.37■□□□□ 0.53
KCNMA1-210ENST00000404771 PKD2Q13563 968 aa18.36■□□□□ 0.53
KCNMA1-210ENST00000404771 HNRNPMP52272 730 aaKnown RBP eCLIP18.35■□□□□ 0.53
KCNMA1-210ENST00000404771 ARHGAP35Q9NRY4 1499 aa18.35■□□□□ 0.53
KCNMA1-210ENST00000404771 FMN1Q68DA7 1419 aa18.31■□□□□ 0.52
KCNMA1-210ENST00000404771 MPHOSPH9Q99550 1183 aa18.31■□□□□ 0.52
KCNMA1-210ENST00000404771 MLECQ14165 292 aa18.31■□□□□ 0.52
KCNMA1-210ENST00000404771 GGT6Q6P531 493 aa18.29■□□□□ 0.52
KCNMA1-210ENST00000404771 AQRO60306 1485 aaKnown RBP eCLIP18.29■□□□□ 0.52
KCNMA1-210ENST00000404771 ARID4BQ4LE39 1312 aaPredicted RBP18.28■□□□□ 0.52
KCNMA1-210ENST00000404771 MSH5O43196 834 aa18.27■□□□□ 0.52
KCNMA1-210ENST00000404771 NEFMP07197 916 aa18.27■□□□□ 0.51
KCNMA1-210ENST00000404771 HSPA5P11021 654 aaKnown RBP18.26■□□□□ 0.51
KCNMA1-210ENST00000404771 SYNJ1O43426 1573 aa18.25■□□□□ 0.51
KCNMA1-210ENST00000404771 TNNT2P45379 298 aaPredicted RBP18.25■□□□□ 0.51
KCNMA1-210ENST00000404771 ZNF644Q9H582 1327 aaPredicted RBP18.25■□□□□ 0.51
KCNMA1-210ENST00000404771 L3MBTL2Q969R5 705 aa18.24■□□□□ 0.51
KCNMA1-210ENST00000404771 WDR43Q15061 677 aaKnown RBP eCLIP18.23■□□□□ 0.51
KCNMA1-210ENST00000404771 CARMIL2Q6F5E8 1435 aa18.23■□□□□ 0.51
KCNMA1-210ENST00000404771 PPP1R15AO75807 674 aaPredicted RBP18.22■□□□□ 0.51
KCNMA1-210ENST00000404771 SAFB2Q14151 953 aaKnown RBP eCLIP18.22■□□□□ 0.51
KCNMA1-210ENST00000404771 CC2D1BQ5T0F9 858 aaKnown RBP18.22■□□□□ 0.51
KCNMA1-210ENST00000404771 NUP155O75694 1391 aa18.21■□□□□ 0.51
KCNMA1-210ENST00000404771 NBR1Q14596 966 aa18.2■□□□□ 0.5
KCNMA1-210ENST00000404771 GAPVD1Q14C86 1478 aa18.19■□□□□ 0.5
KCNMA1-210ENST00000404771 CCDC136Q96JN2 1154 aa18.19■□□□□ 0.5
KCNMA1-210ENST00000404771 DHX57Q6P158 1386 aaKnown RBP18.19■□□□□ 0.5
KCNMA1-210ENST00000404771 NEUROD2Q15784 382 aa18.19■□□□□ 0.5
KCNMA1-210ENST00000404771 BICRAQ9NZM4 1560 aa18.18■□□□□ 0.5
KCNMA1-210ENST00000404771 PPM1GO15355 546 aaPredicted RBP18.17■□□□□ 0.5
KCNMA1-210ENST00000404771 CFTRP13569 1480 aa18.17■□□□□ 0.5
KCNMA1-210ENST00000404771 FANCIQ9NVI1 1328 aa18.16■□□□□ 0.5
KCNMA1-210ENST00000404771 KNSTRNQ9Y448 316 aa18.14■□□□□ 0.49
KCNMA1-210ENST00000404771 ARAP1Q96P48 1450 aa18.14■□□□□ 0.49
KCNMA1-210ENST00000404771 PHLDB1Q86UU1 1377 aa18.13■□□□□ 0.49
KCNMA1-210ENST00000404771 EFCAB2Q5VUJ9 269 aa18.13■□□□□ 0.49
KCNMA1-210ENST00000404771 ANP32AP39687 249 aaKnown RBP18.13■□□□□ 0.49
KCNMA1-210ENST00000404771 KIF3BO15066 747 aa18.13■□□□□ 0.49
KCNMA1-210ENST00000404771 DEKP35659 375 aaKnown RBP18.13■□□□□ 0.49
KCNMA1-210ENST00000404771 NUTM2DQ5VT03 806 aaPredicted RBP18.13■□□□□ 0.49
KCNMA1-210ENST00000404771 KIF21BO75037 1637 aa18.11■□□□□ 0.49
KCNMA1-210ENST00000404771 TRHP20396 242 aaPredicted RBP18.11■□□□□ 0.49
KCNMA1-210ENST00000404771 ZBTB7CA1YPR0 619 aa18.09■□□□□ 0.49
KCNMA1-210ENST00000404771 C14orf37Q86TY3 774 aa18.08■□□□□ 0.49
KCNMA1-210ENST00000404771 ZBTB47Q9UFB7 747 aaPredicted RBP18.08■□□□□ 0.49
KCNMA1-210ENST00000404771 TIMELESSQ9UNS1 1208 aa18.08■□□□□ 0.49
KCNMA1-210ENST00000404771 CC2D2AQ9P2K1 1620 aa18.08■□□□□ 0.48
KCNMA1-210ENST00000404771 STK26Q9P289 416 aa18.08■□□□□ 0.48
KCNMA1-210ENST00000404771 CYB5RLQ6IPT4 315 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms