RNA–Protein interactions for RNA: ENST00000404771.8

KCNMA1-210, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-210ENST00000404771 NISCHQ9Y2I1 1504 aa24.9■■□□□ 1.58
KCNMA1-210ENST00000404771 DCAF8L2P0C7V8 631 aa24.74■■□□□ 1.55
KCNMA1-210ENST00000404771 SHROOM4Q9ULL8 1493 aa23.58■■□□□ 1.37
KCNMA1-210ENST00000404771 SUPT5HO00267 1087 aaKnown RBP23.57■■□□□ 1.36
KCNMA1-210ENST00000404771 EHMT2Q96KQ7 1210 aa22.7■■□□□ 1.22
KCNMA1-210ENST00000404771 FAM9AQ8IZU1 332 aaPredicted RBP22.18■■□□□ 1.14
KCNMA1-210ENST00000404771 TTBK1Q5TCY1 1321 aaPredicted RBP21.78■■□□□ 1.08
KCNMA1-210ENST00000404771 HRCP23327 699 aa21.7■■□□□ 1.06
KCNMA1-210ENST00000404771 PCGF6Q9BYE7 350 aa21.7■■□□□ 1.06
KCNMA1-210ENST00000404771 TRIM41Q8WV44 630 aa21.64■■□□□ 1.05
KCNMA1-210ENST00000404771 RANGAP1P46060 587 aaPredicted RBP21.63■■□□□ 1.05
KCNMA1-210ENST00000404771 PELP1Q8IZL8 1130 aaKnown RBP21.53■■□□□ 1.04
KCNMA1-210ENST00000404771 ABCC9O60706 1549 aa21.42■■□□□ 1.02
KCNMA1-210ENST00000404771 PPARGC1BQ86YN6 1023 aaKnown RBP21.36■■□□□ 1.01
KCNMA1-210ENST00000404771 LOC105371045A0A1W2PR82 267 aa21.35■■□□□ 1.01
KCNMA1-210ENST00000404771 CHIC1Q5VXU3 224 aa21.31■■□□□ 1
KCNMA1-210ENST00000404771 PABPN1Q86U42 306 aaKnown RBP eCLIP21.26■□□□□ 0.99
KCNMA1-210ENST00000404771 APLP2Q06481 763 aa21.25■□□□□ 0.99
KCNMA1-210ENST00000404771 UBTFP17480 764 aaKnown RBP21.21■□□□□ 0.99
KCNMA1-210ENST00000404771 ATP1B4Q9UN42 357 aaPredicted RBP21.05■□□□□ 0.96
KCNMA1-210ENST00000404771 MYO15BQ96JP2 1530 aa20.9■□□□□ 0.94
KCNMA1-210ENST00000404771 CCER1Q8TC90 406 aaPredicted RBP20.85■□□□□ 0.93
KCNMA1-210ENST00000404771 MYT1Q01538 1121 aa20.83■□□□□ 0.92
KCNMA1-210ENST00000404771 SCAF1Q9H7N4 1312 aaKnown RBP20.67■□□□□ 0.9
KCNMA1-210ENST00000404771 ZCCHC6Q5VYS8 1495 aaKnown RBP20.64■□□□□ 0.89
KCNMA1-210ENST00000404771 TRIM26Q12899 539 aaPredicted RBP20.62■□□□□ 0.89
KCNMA1-210ENST00000404771 ITGAEP38570 1179 aa20.58■□□□□ 0.89
KCNMA1-210ENST00000404771 HNRNPUL2Q1KMD3 747 aaKnown RBP20.5■□□□□ 0.87
KCNMA1-210ENST00000404771 SCRIBQ14160 1630 aa20.49■□□□□ 0.87
KCNMA1-210ENST00000404771 DCAF1Q9Y4B6 1507 aa20.47■□□□□ 0.87
KCNMA1-210ENST00000404771 YTHDC1Q96MU7 727 aaKnown RBP20.43■□□□□ 0.86
KCNMA1-210ENST00000404771 ZEB1P37275 1124 aaPredicted RBP20.42■□□□□ 0.86
KCNMA1-210ENST00000404771 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.37■□□□□ 0.85
KCNMA1-210ENST00000404771 CCDC180Q9P1Z9 1646 aa20.27■□□□□ 0.83
KCNMA1-210ENST00000404771 CENPBP07199 599 aaPredicted RBP20.2■□□□□ 0.82
KCNMA1-210ENST00000404771 ACIN1Q9UKV3 1341 aaKnown RBP20.12■□□□□ 0.81
KCNMA1-210ENST00000404771 CSRNP3Q8WYN3 585 aa20.1■□□□□ 0.81
KCNMA1-210ENST00000404771 P3H3Q8IVL6 736 aa20.1■□□□□ 0.81
KCNMA1-210ENST00000404771 NEUROD1Q13562 356 aa20.01■□□□□ 0.79
KCNMA1-210ENST00000404771 RSF1Q96T23 1441 aaPredicted RBP20■□□□□ 0.79
KCNMA1-210ENST00000404771 ARID3CA6NKF2 412 aa20■□□□□ 0.79
KCNMA1-210ENST00000404771 FBLN2P98095 1184 aa19.99■□□□□ 0.79
KCNMA1-210ENST00000404771 FAM50AQ14320 339 aaKnown RBP19.99■□□□□ 0.79
KCNMA1-210ENST00000404771 GTF3C3Q9Y5Q9 886 aa19.97■□□□□ 0.79
KCNMA1-210ENST00000404771 CNGB1Q14028 1251 aaPredicted RBP19.97■□□□□ 0.79
KCNMA1-210ENST00000404771 MYT1LQ9UL68 1186 aa19.9■□□□□ 0.78
KCNMA1-210ENST00000404771 CECR2Q9BXF3 1484 aa19.88■□□□□ 0.77
KCNMA1-210ENST00000404771 POLR3GLQ9BT43 218 aa19.87■□□□□ 0.77
KCNMA1-210ENST00000404771 DIEXFQ68CQ4 756 aaKnown RBP19.81■□□□□ 0.76
KCNMA1-210ENST00000404771 RB1CC1Q8TDY2 1594 aa19.74■□□□□ 0.75
KCNMA1-210ENST00000404771 TRIM52Q96A61 297 aa19.68■□□□□ 0.74
KCNMA1-210ENST00000404771 NACADO15069 1562 aa19.64■□□□□ 0.74
KCNMA1-210ENST00000404771 ZNF326Q5BKZ1 582 aaKnown RBP19.5■□□□□ 0.71
KCNMA1-210ENST00000404771 MROH2BQ7Z745 1585 aa19.5■□□□□ 0.71
KCNMA1-210ENST00000404771 ZNF777Q9ULD5 760 aaPredicted RBP19.49■□□□□ 0.71
KCNMA1-210ENST00000404771 NEFLP07196 543 aa19.48■□□□□ 0.71
KCNMA1-210ENST00000404771 BAZ1BQ9UIG0 1483 aaKnown RBP19.42■□□□□ 0.7
KCNMA1-210ENST00000404771 WRNQ14191 1432 aaPredicted RBP eCLIP19.41■□□□□ 0.7
KCNMA1-210ENST00000404771 ERICH6Q7L0X2 663 aa19.39■□□□□ 0.7
KCNMA1-210ENST00000404771 CHIC2Q9UKJ5 165 aa19.38■□□□□ 0.69
KCNMA1-210ENST00000404771 SOGA1O94964 1423 aa19.35■□□□□ 0.69
KCNMA1-210ENST00000404771 BCANQ96GW7 911 aa19.35■□□□□ 0.69
KCNMA1-210ENST00000404771 BAZ1AQ9NRL2 1556 aaPredicted RBP19.34■□□□□ 0.69
KCNMA1-210ENST00000404771 ZNF316A6NFI3 1004 aaPredicted RBP19.34■□□□□ 0.69
KCNMA1-210ENST00000404771 CLIP1P30622 1438 aa19.34■□□□□ 0.69
KCNMA1-210ENST00000404771 BCL11AQ9H165 835 aa19.32■□□□□ 0.68
KCNMA1-210ENST00000404771 CEP162Q5TB80 1403 aa19.31■□□□□ 0.68
KCNMA1-210ENST00000404771 SLC4A1APQ9BWU0 796 aaKnown RBP19.29■□□□□ 0.68
KCNMA1-210ENST00000404771 CCDC88BA6NC98 1476 aa19.25■□□□□ 0.67
KCNMA1-210ENST00000404771 ABCC8Q09428 1581 aa19.24■□□□□ 0.67
KCNMA1-210ENST00000404771 HIRIP3Q9BW71 556 aaPredicted RBP19.22■□□□□ 0.67
KCNMA1-210ENST00000404771 CHMP7Q8WUX9 453 aaPredicted RBP19.21■□□□□ 0.67
KCNMA1-210ENST00000404771 WIZO95785 1651 aa19.19■□□□□ 0.66
KCNMA1-210ENST00000404771 ANP32EQ9BTT0 268 aa19.16■□□□□ 0.66
KCNMA1-210ENST00000404771 CDK11AQ9UQ88 783 aaPredicted RBP19.15■□□□□ 0.66
KCNMA1-210ENST00000404771 GOLGA3Q08378 1498 aa19.13■□□□□ 0.65
KCNMA1-210ENST00000404771 RRP7BPQ9NSQ0 103 aa19.1■□□□□ 0.65
KCNMA1-210ENST00000404771 TNIKQ9UKE5 1360 aa19.1■□□□□ 0.65
KCNMA1-210ENST00000404771 MTUS2Q5JR59 1369 aa19.1■□□□□ 0.65
KCNMA1-210ENST00000404771 DDX10Q13206 875 aaKnown RBP19.09■□□□□ 0.65
KCNMA1-210ENST00000404771 KIF27Q86VH2 1401 aa19.07■□□□□ 0.64
KCNMA1-210ENST00000404771 ANP32CO43423 234 aa19.06■□□□□ 0.64
KCNMA1-210ENST00000404771 EEA1Q15075 1411 aa19.05■□□□□ 0.64
KCNMA1-210ENST00000404771 MIER1Q8N108 512 aa19.05■□□□□ 0.64
KCNMA1-210ENST00000404771 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.05■□□□□ 0.64
KCNMA1-210ENST00000404771 KCNH8Q96L42 1107 aa19.03■□□□□ 0.64
KCNMA1-210ENST00000404771 CEP164Q9UPV0 1460 aa18.98■□□□□ 0.63
KCNMA1-210ENST00000404771 KANK4Q5T7N3 995 aaPredicted RBP18.98■□□□□ 0.63
KCNMA1-210ENST00000404771 CUX2O14529 1486 aa18.98■□□□□ 0.63
KCNMA1-210ENST00000404771 TONSLQ96HA7 1378 aa18.97■□□□□ 0.63
KCNMA1-210ENST00000404771 CLSPNQ9HAW4 1339 aa18.97■□□□□ 0.63
KCNMA1-210ENST00000404771 SENP3Q9H4L4 574 aaPredicted RBP18.97■□□□□ 0.63
KCNMA1-210ENST00000404771 RUSC2Q8N2Y8 1516 aa18.96■□□□□ 0.63
KCNMA1-210ENST00000404771 TDRD9Q8NDG6 1382 aaKnown RBP18.95■□□□□ 0.62
KCNMA1-210ENST00000404771 KDM2AQ9Y2K7 1162 aa18.94■□□□□ 0.62
KCNMA1-210ENST00000404771 CARMIL1Q5VZK9 1371 aa18.94■□□□□ 0.62
KCNMA1-210ENST00000404771 CHGAP10645 457 aaKnown RBP18.92■□□□□ 0.62
KCNMA1-210ENST00000404771 PLPPR3Q6T4P5 718 aa18.92■□□□□ 0.62
KCNMA1-210ENST00000404771 SUPT16HQ9Y5B9 1047 aaKnown RBP18.92■□□□□ 0.62
KCNMA1-210ENST00000404771 TSHZ2Q9NRE2 1034 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms