RNA–Protein interactions for RNA: ENST00000400566.5

SAMSN1-203, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMSN1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-203ENST00000400566 BIVM-ERCC5R4GMW8 1640 aa9.26□□□□□ -0.93
SAMSN1-203ENST00000400566 TRIM41Q8WV44 630 aa9.26□□□□□ -0.93
SAMSN1-203ENST00000400566 CUX1P39880 1505 aa9.25□□□□□ -0.93
SAMSN1-203ENST00000400566 DNMBPQ6XZF7 1577 aa9.22□□□□□ -0.93
SAMSN1-203ENST00000400566 URB2Q14146 1524 aaKnown RBP9.2□□□□□ -0.94
SAMSN1-203ENST00000400566 TOPBP1Q92547 1522 aa9.2□□□□□ -0.94
SAMSN1-203ENST00000400566 ERCC6Q03468 1493 aa9.19□□□□□ -0.94
SAMSN1-203ENST00000400566 MRC2Q9UBG0 1479 aa9.19□□□□□ -0.94
SAMSN1-203ENST00000400566 THOC2Q8NI27 1593 aaKnown RBP9.17□□□□□ -0.94
SAMSN1-203ENST00000400566 WDR62O43379 1518 aa9.16□□□□□ -0.94
SAMSN1-203ENST00000400566 FGD5Q6ZNL6 1462 aa9.16□□□□□ -0.94
SAMSN1-203ENST00000400566 MYCNP04198 464 aaPredicted RBP9.16□□□□□ -0.94
SAMSN1-203ENST00000400566 POLA1P09884 1462 aaPredicted RBP9.15□□□□□ -0.95
SAMSN1-203ENST00000400566 REM2Q8IYK8 340 aaPredicted RBP9.13□□□□□ -0.95
SAMSN1-203ENST00000400566 EEA1Q15075 1411 aa9.12□□□□□ -0.95
SAMSN1-203ENST00000400566 SOGA1O94964 1423 aa9.11□□□□□ -0.95
SAMSN1-203ENST00000400566 C19orf67A6NJJ6 358 aa9.11□□□□□ -0.95
SAMSN1-203ENST00000400566 ABCA10Q8WWZ4 1543 aa9.1□□□□□ -0.95
SAMSN1-203ENST00000400566 WDR97A6NE52 1622 aa9.1□□□□□ -0.95
SAMSN1-203ENST00000400566 CUX2O14529 1486 aa9.09□□□□□ -0.95
SAMSN1-203ENST00000400566 TARBP1Q13395 1621 aaKnown RBP9.09□□□□□ -0.95
SAMSN1-203ENST00000400566 RAD54L2Q9Y4B4 1467 aa9.09□□□□□ -0.95
SAMSN1-203ENST00000400566 RUSC2Q8N2Y8 1516 aa9.09□□□□□ -0.96
SAMSN1-203ENST00000400566 KIF27Q86VH2 1401 aa9.08□□□□□ -0.96
SAMSN1-203ENST00000400566 IFT140Q96RY7 1462 aa9.06□□□□□ -0.96
SAMSN1-203ENST00000400566 OTUD5Q96G74 571 aa9.06□□□□□ -0.96
SAMSN1-203ENST00000400566 FAM9AQ8IZU1 332 aaPredicted RBP9.05□□□□□ -0.96
SAMSN1-203ENST00000400566 ABCA5Q8WWZ7 1642 aa9.04□□□□□ -0.96
SAMSN1-203ENST00000400566 POTEIP0CG38 1075 aa9.02□□□□□ -0.96
SAMSN1-203ENST00000400566 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.02□□□□□ -0.97
SAMSN1-203ENST00000400566 HNRNPUL2Q1KMD3 747 aaKnown RBP9.02□□□□□ -0.97
SAMSN1-203ENST00000400566 KIF21BO75037 1637 aa9.01□□□□□ -0.97
SAMSN1-203ENST00000400566 SAMD1Q6SPF0 538 aaPredicted RBP9.01□□□□□ -0.97
SAMSN1-203ENST00000400566 GAPVD1Q14C86 1478 aa9.01□□□□□ -0.97
SAMSN1-203ENST00000400566 IGF1RP08069 1367 aa9□□□□□ -0.97
SAMSN1-203ENST00000400566 TDRD9Q8NDG6 1382 aaKnown RBP9□□□□□ -0.97
SAMSN1-203ENST00000400566 PITPNM1O00562 1244 aa9□□□□□ -0.97
SAMSN1-203ENST00000400566 ERICH3Q5RHP9 1530 aa9□□□□□ -0.97
SAMSN1-203ENST00000400566 ZNF608Q9ULD9 1512 aaPredicted RBP8.99□□□□□ -0.97
SAMSN1-203ENST00000400566 PRXQ9BXM0 1461 aa8.99□□□□□ -0.97
SAMSN1-203ENST00000400566 PBRM1Q86U86 1689 aa8.99□□□□□ -0.97
SAMSN1-203ENST00000400566 EIF4G3O43432 1585 aaKnown RBP8.98□□□□□ -0.97
SAMSN1-203ENST00000400566 ATXN8OSP0DMR3 200 aa8.98□□□□□ -0.97
SAMSN1-203ENST00000400566 ATF5Q9Y2D1 282 aaPredicted RBP8.98□□□□□ -0.97
SAMSN1-203ENST00000400566 CUL7Q14999 1698 aa8.98□□□□□ -0.97
SAMSN1-203ENST00000400566 CLCN6P51797 869 aa8.98□□□□□ -0.97
SAMSN1-203ENST00000400566 AQRO60306 1485 aaKnown RBP eCLIP8.98□□□□□ -0.973e-7■■■■■ 37.1
SAMSN1-203ENST00000400566 GOLGA3Q08378 1498 aa8.96□□□□□ -0.97
SAMSN1-203ENST00000400566 GRIN2BQ13224 1484 aa8.96□□□□□ -0.97
SAMSN1-203ENST00000400566 LOC105371045A0A1W2PR82 267 aa8.96□□□□□ -0.98
SAMSN1-203ENST00000400566 CARMIL1Q5VZK9 1371 aa8.95□□□□□ -0.98
SAMSN1-203ENST00000400566 RAPGEF2Q9Y4G8 1499 aa8.95□□□□□ -0.98
SAMSN1-203ENST00000400566 ADAMTS12P58397 1594 aa8.93□□□□□ -0.98
SAMSN1-203ENST00000400566 FHAD1B1AJZ9 1412 aa8.92□□□□□ -0.98
SAMSN1-203ENST00000400566 MAGI1Q96QZ7 1491 aaPredicted RBP8.92□□□□□ -0.98
SAMSN1-203ENST00000400566 TNIKQ9UKE5 1360 aa8.91□□□□□ -0.98
SAMSN1-203ENST00000400566 SNAPC4Q5SXM2 1469 aa8.91□□□□□ -0.98
SAMSN1-203ENST00000400566 UBTFP17480 764 aaKnown RBP8.88□□□□□ -0.99
SAMSN1-203ENST00000400566 SYNJ2O15056 1496 aa8.87□□□□□ -0.99
SAMSN1-203ENST00000400566 CTTNBP2Q8WZ74 1663 aa8.86□□□□□ -0.99
SAMSN1-203ENST00000400566 GRIN2AQ12879 1464 aa8.86□□□□□ -0.99
SAMSN1-203ENST00000400566 DCBLD2Q96PD2 775 aa8.85□□□□□ -0.99
SAMSN1-203ENST00000400566 CEP162Q5TB80 1403 aa8.85□□□□□ -0.99
SAMSN1-203ENST00000400566 CHMP7Q8WUX9 453 aaPredicted RBP8.82□□□□□ -1
SAMSN1-203ENST00000400566 CHD1O14646 1710 aa8.82□□□□□ -1
SAMSN1-203ENST00000400566 NUP160Q12769 1436 aa8.81□□□□□ -1
SAMSN1-203ENST00000400566 CLIP1P30622 1438 aa8.8□□□□□ -1
SAMSN1-203ENST00000400566 PRKAR2AP13861 404 aaKnown RBP8.8□□□□□ -1
SAMSN1-203ENST00000400566 IQGAP2Q13576 1575 aa8.8□□□□□ -1
SAMSN1-203ENST00000400566 CEP170Q5SW79 1584 aa8.8□□□□□ -1
SAMSN1-203ENST00000400566 KIAA0586Q9BVV6 1533 aa8.8□□□□□ -1
SAMSN1-203ENST00000400566 CDAN1Q8IWY9 1227 aa8.79□□□□□ -1
SAMSN1-203ENST00000400566 FBLN2P98095 1184 aa8.78□□□□□ -1
SAMSN1-203ENST00000400566 EFCAB5A4FU69 1503 aa8.77□□□□□ -1.01
SAMSN1-203ENST00000400566 MMRN1Q13201 1228 aa8.77□□□□□ -1.01
SAMSN1-203ENST00000400566 ARHGAP35Q9NRY4 1499 aa8.76□□□□□ -1.01
SAMSN1-203ENST00000400566 SAMD9Q5K651 1589 aa8.76□□□□□ -1.01
SAMSN1-203ENST00000400566 UGGT2Q9NYU1 1516 aa8.76□□□□□ -1.01
SAMSN1-203ENST00000400566 ARAP1Q96P48 1450 aa8.74□□□□□ -1.01
SAMSN1-203ENST00000400566 FAM163AQ96GL9 167 aaPredicted RBP8.74□□□□□ -1.01
SAMSN1-203ENST00000400566 RANGAP1P46060 587 aaPredicted RBP8.73□□□□□ -1.01
SAMSN1-203ENST00000400566 CLASP1Q7Z460 1538 aa8.73□□□□□ -1.01
SAMSN1-203ENST00000400566 VPS8Q8N3P4 1428 aa8.72□□□□□ -1.01
SAMSN1-203ENST00000400566 SHROOM2Q13796 1616 aa8.71□□□□□ -1.01
SAMSN1-203ENST00000400566 DISP1Q96F81 1524 aa8.71□□□□□ -1.02
SAMSN1-203ENST00000400566 KIAA0556O60303 1618 aa8.71□□□□□ -1.02
SAMSN1-203ENST00000400566 POLA2Q14181 598 aa8.7□□□□□ -1.02
SAMSN1-203ENST00000400566 LCE2DQ5TA82 110 aaPredicted RBP8.7□□□□□ -1.02
SAMSN1-203ENST00000400566 JPH4Q96JJ6 628 aa8.7□□□□□ -1.02
SAMSN1-203ENST00000400566 FHOD3Q2V2M9 1422 aa8.69□□□□□ -1.02
SAMSN1-203ENST00000400566 FMN1Q68DA7 1419 aa8.68□□□□□ -1.02
SAMSN1-203ENST00000400566 CARMIL2Q6F5E8 1435 aa8.68□□□□□ -1.02
SAMSN1-203ENST00000400566 MAMSTRQ6ZN01 415 aa8.66□□□□□ -1.02
SAMSN1-203ENST00000400566 P3H3Q8IVL6 736 aa8.66□□□□□ -1.02
SAMSN1-203ENST00000400566 OSCARQ8IYS5 282 aa8.66□□□□□ -1.02
SAMSN1-203ENST00000400566 PRG4Q92954 1404 aaPredicted RBP8.66□□□□□ -1.02
SAMSN1-203ENST00000400566 PCF11O94913 1555 aaKnown RBP8.65□□□□□ -1.03
SAMSN1-203ENST00000400566 FYCO1Q9BQS8 1478 aa8.65□□□□□ -1.03
SAMSN1-203ENST00000400566 CASKIN1Q8WXD9 1431 aa8.64□□□□□ -1.03
SAMSN1-203ENST00000400566 POTEB2H3BUK9 544 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms