RNA–Protein interactions for RNA: ENST00000400181.8

KDM1A-202, Transcript of lysine demethylase 1A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KDM1A, Length 3,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-202ENST00000400181 RBM19Q9Y4C8 960 aaKnown RBP25.58■■□□□ 1.69
KDM1A-202ENST00000400181 WDR97A6NE52 1622 aa25.57■■□□□ 1.68
KDM1A-202ENST00000400181 BCL11AQ9H165 835 aa25.55■■□□□ 1.68
KDM1A-202ENST00000400181 SETD5Q9C0A6 1442 aa25.54■■□□□ 1.68
KDM1A-202ENST00000400181 ANP32CO43423 234 aa25.53■■□□□ 1.68
KDM1A-202ENST00000400181 BIVM-ERCC5R4GMW8 1640 aa25.52■■□□□ 1.68
KDM1A-202ENST00000400181 PPP1R15AO75807 674 aaPredicted RBP25.52■■□□□ 1.68
KDM1A-202ENST00000400181 CUX1P39880 1505 aa25.51■■□□□ 1.67
KDM1A-202ENST00000400181 PHLDB1Q86UU1 1377 aa25.47■■□□□ 1.67
KDM1A-202ENST00000400181 IRX6P78412 446 aaPredicted RBP25.45■■□□□ 1.66
KDM1A-202ENST00000400181 TIAM1Q13009 1591 aa25.35■■□□□ 1.65
KDM1A-202ENST00000400181 CCER2I3L3R5 266 aa25.34■■□□□ 1.65
KDM1A-202ENST00000400181 LRRC9Q6ZRR7 1453 aa25.33■■□□□ 1.65
KDM1A-202ENST00000400181 IGF1RP08069 1367 aa25.32■■□□□ 1.64
KDM1A-202ENST00000400181 HNRNPUQ00839 825 aaKnown RBP eCLIP25.32■■□□□ 1.64
KDM1A-202ENST00000400181 TONSLQ96HA7 1378 aa25.29■■□□□ 1.64
KDM1A-202ENST00000400181 MSH5O43196 834 aa25.28■■□□□ 1.64
KDM1A-202ENST00000400181 CARMIL1Q5VZK9 1371 aa25.28■■□□□ 1.64
KDM1A-202ENST00000400181 TIMELESSQ9UNS1 1208 aa25.22■■□□□ 1.63
KDM1A-202ENST00000400181 ERICH6Q7L0X2 663 aa25.2■■□□□ 1.62
KDM1A-202ENST00000400181 CDK11AQ9UQ88 783 aaPredicted RBP25.18■■□□□ 1.62
KDM1A-202ENST00000400181 FHOD3Q2V2M9 1422 aa25.17■■□□□ 1.62
KDM1A-202ENST00000400181 CFTRP13569 1480 aa25.15■■□□□ 1.62
KDM1A-202ENST00000400181 FHAD1B1AJZ9 1412 aa25.13■■□□□ 1.61
KDM1A-202ENST00000400181 MAP3K1Q13233 1512 aa25.11■■□□□ 1.61
KDM1A-202ENST00000400181 NCAPD3P42695 1498 aa25.11■■□□□ 1.61
KDM1A-202ENST00000400181 PCF11O94913 1555 aaKnown RBP25.1■■□□□ 1.61
KDM1A-202ENST00000400181 FGD5Q6ZNL6 1462 aa25.03■■□□□ 1.6
KDM1A-202ENST00000400181 CCDC184Q52MB2 194 aa25.02■■□□□ 1.6
KDM1A-202ENST00000400181 CCDC18Q5T9S5 1454 aa25.02■■□□□ 1.6
KDM1A-202ENST00000400181 HMGXB3Q12766 1538 aa25.02■■□□□ 1.6
KDM1A-202ENST00000400181 FAM9BQ8IZU0 186 aa25.01■■□□□ 1.6
KDM1A-202ENST00000400181 CNGB1Q14028 1251 aaPredicted RBP25.01■■□□□ 1.59
KDM1A-202ENST00000400181 CHIC2Q9UKJ5 165 aa25.01■■□□□ 1.59
KDM1A-202ENST00000400181 HSPA5P11021 654 aaKnown RBP25■■□□□ 1.59
KDM1A-202ENST00000400181 RRP7BPQ9NSQ0 103 aa24.99■■□□□ 1.59
KDM1A-202ENST00000400181 MTUS2Q5JR59 1369 aa24.98■■□□□ 1.59
KDM1A-202ENST00000400181 B4GALNT3Q6L9W6 998 aa24.98■■□□□ 1.59
KDM1A-202ENST00000400181 WASHC2AQ641Q2 1341 aa24.97■■□□□ 1.59
KDM1A-202ENST00000400181 PTPRKQ15262 1439 aa24.97■■□□□ 1.59
KDM1A-202ENST00000400181 FANCIQ9NVI1 1328 aa24.96■■□□□ 1.59
KDM1A-202ENST00000400181 FGD6Q6ZV73 1430 aa24.96■■□□□ 1.59
KDM1A-202ENST00000400181 CFAP43Q8NDM7 1665 aa24.94■■□□□ 1.58
KDM1A-202ENST00000400181 UACAQ9BZF9 1416 aa24.91■■□□□ 1.58
KDM1A-202ENST00000400181 AQRO60306 1485 aaKnown RBP eCLIP24.9■■□□□ 1.582e-13■■■□□ 16.5
KDM1A-202ENST00000400181 PPP4R2Q9NY27 417 aa24.9■■□□□ 1.58
KDM1A-202ENST00000400181 SENP3-EIF4A1A0A087X0R7 540 aa24.87■■□□□ 1.57
KDM1A-202ENST00000400181 MRS2Q9HD23 443 aa24.87■■□□□ 1.57
KDM1A-202ENST00000400181 CASKIN1Q8WXD9 1431 aa24.87■■□□□ 1.57
KDM1A-202ENST00000400181 FOXD1Q16676 465 aa24.87■■□□□ 1.57
KDM1A-202ENST00000400181 CADPSQ9ULU8 1353 aa24.87■■□□□ 1.57
KDM1A-202ENST00000400181 EIF4G2P78344 907 aaKnown RBP eCLIP24.87■■□□□ 1.576e-7■■■■■ 31.9
KDM1A-202ENST00000400181 FYCO1Q9BQS8 1478 aa24.86■■□□□ 1.57
KDM1A-202ENST00000400181 RAD54L2Q9Y4B4 1467 aa24.86■■□□□ 1.57
KDM1A-202ENST00000400181 HFM1A2PYH4 1435 aa24.85■■□□□ 1.57
KDM1A-202ENST00000400181 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.83■■□□□ 1.576e-6■□□□□ 9.1
KDM1A-202ENST00000400181 NAIPQ13075 1403 aa24.83■■□□□ 1.56
KDM1A-202ENST00000400181 C11orf95C9JLR9 678 aaPredicted RBP24.82■■□□□ 1.56
KDM1A-202ENST00000400181 ARID3CA6NKF2 412 aa24.81■■□□□ 1.56
KDM1A-202ENST00000400181 PTPN23Q9H3S7 1636 aa24.79■■□□□ 1.56
KDM1A-202ENST00000400181 NBR1Q14596 966 aa24.79■■□□□ 1.56
KDM1A-202ENST00000400181 POLR3GLQ9BT43 218 aa24.77■■□□□ 1.56
KDM1A-202ENST00000400181 L3MBTL2Q969R5 705 aa24.77■■□□□ 1.56
KDM1A-202ENST00000400181 PRKRIP1Q9H875 184 aaPredicted RBP24.77■■□□□ 1.56
KDM1A-202ENST00000400181 FMN1Q68DA7 1419 aa24.75■■□□□ 1.55
KDM1A-202ENST00000400181 NCOA2Q15596 1464 aa24.73■■□□□ 1.55
KDM1A-202ENST00000400181 DEKP35659 375 aaKnown RBP24.72■■□□□ 1.55
KDM1A-202ENST00000400181 KDM5BQ9UGL1 1544 aa24.72■■□□□ 1.55
KDM1A-202ENST00000400181 MYOM3Q5VTT5 1437 aa24.7■■□□□ 1.55
KDM1A-202ENST00000400181 CNTLNQ9NXG0 1405 aa24.7■■□□□ 1.54
KDM1A-202ENST00000400181 ERICH6BQ5W0A0 696 aa24.69■■□□□ 1.54
KDM1A-202ENST00000400181 EFCAB5A4FU69 1503 aa24.68■■□□□ 1.54
KDM1A-202ENST00000400181 MPHOSPH9Q99550 1183 aa24.67■■□□□ 1.54
KDM1A-202ENST00000400181 FANCD2Q9BXW9 1451 aa24.67■■□□□ 1.54
KDM1A-202ENST00000400181 PAK3O75914 559 aaPredicted RBP24.66■■□□□ 1.54
KDM1A-202ENST00000400181 CCDC7Q96M83 1385 aa24.65■■□□□ 1.54
KDM1A-202ENST00000400181 SNAPC4Q5SXM2 1469 aa24.65■■□□□ 1.54
KDM1A-202ENST00000400181 ZBED9Q6R2W3 1325 aa24.65■■□□□ 1.54
KDM1A-202ENST00000400181 NOP58Q9Y2X3 529 aaKnown RBP24.63■■□□□ 1.53
KDM1A-202ENST00000400181 NBPF8Q3BBV2 869 aa24.63■■□□□ 1.53
KDM1A-202ENST00000400181 PRDM2Q13029 1718 aa24.62■■□□□ 1.53
KDM1A-202ENST00000400181 TDRD9Q8NDG6 1382 aaKnown RBP24.61■■□□□ 1.53
KDM1A-202ENST00000400181 POLA1P09884 1462 aaPredicted RBP24.6■■□□□ 1.53
KDM1A-202ENST00000400181 ZNF326Q5BKZ1 582 aaKnown RBP24.6■■□□□ 1.53
KDM1A-202ENST00000400181 AKNAQ7Z591 1439 aa24.58■■□□□ 1.53
KDM1A-202ENST00000400181 CCDC136Q96JN2 1154 aa24.58■■□□□ 1.52
KDM1A-202ENST00000400181 KIF7Q2M1P5 1343 aa24.57■■□□□ 1.52
KDM1A-202ENST00000400181 DENND4BO75064 1496 aaPredicted RBP24.56■■□□□ 1.52
KDM1A-202ENST00000400181 ABCA10Q8WWZ4 1543 aa24.55■■□□□ 1.52
KDM1A-202ENST00000400181 NCOA1Q15788 1441 aa24.53■■□□□ 1.52
KDM1A-202ENST00000400181 KDM6BO15054 1643 aa24.52■■□□□ 1.52
KDM1A-202ENST00000400181 TOPBP1Q92547 1522 aa24.52■■□□□ 1.52
KDM1A-202ENST00000400181 CTTNBP2Q8WZ74 1663 aa24.5■■□□□ 1.51
KDM1A-202ENST00000400181 SUPT6HQ7KZ85 1726 aaKnown RBP24.49■■□□□ 1.51
KDM1A-202ENST00000400181 SLC4A1APQ9BWU0 796 aaKnown RBP24.49■■□□□ 1.51
KDM1A-202ENST00000400181 NESP48681 1621 aa24.49■■□□□ 1.51
KDM1A-202ENST00000400181 LRRIQ1Q96JM4 1722 aa24.49■■□□□ 1.51
KDM1A-202ENST00000400181 MYT1LQ9UL68 1186 aa24.49■■□□□ 1.51
KDM1A-202ENST00000400181 GRIN2BQ13224 1484 aa24.47■■□□□ 1.51
KDM1A-202ENST00000400181 ANP32AP39687 249 aaKnown RBP24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms