RNA–Protein interactions for RNA: ENST00000399353.5

ITSN1-210, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-210ENST00000399353 MROH2BQ7Z745 1585 aa20.38■□□□□ 0.85
ITSN1-210ENST00000399353 NEFMP07197 916 aa20.37■□□□□ 0.85
ITSN1-210ENST00000399353 KANK4Q5T7N3 995 aaPredicted RBP20.36■□□□□ 0.85
ITSN1-210ENST00000399353 RUSC2Q8N2Y8 1516 aa20.36■□□□□ 0.85
ITSN1-210ENST00000399353 DAXXQ9UER7 740 aaPredicted RBP20.32■□□□□ 0.84
ITSN1-210ENST00000399353 BAZ1BQ9UIG0 1483 aaKnown RBP20.29■□□□□ 0.84
ITSN1-210ENST00000399353 ERICH6BQ5W0A0 696 aa20.29■□□□□ 0.84
ITSN1-210ENST00000399353 CCER2I3L3R5 266 aa20.28■□□□□ 0.84
ITSN1-210ENST00000399353 GOLGA3Q08378 1498 aa20.28■□□□□ 0.84
ITSN1-210ENST00000399353 MRS2Q9HD23 443 aa20.24■□□□□ 0.83
ITSN1-210ENST00000399353 TIMELESSQ9UNS1 1208 aa20.24■□□□□ 0.83
ITSN1-210ENST00000399353 IPO9Q96P70 1041 aaKnown RBP20.22■□□□□ 0.83
ITSN1-210ENST00000399353 WIZO95785 1651 aa20.21■□□□□ 0.83
ITSN1-210ENST00000399353 PPP1R15AO75807 674 aaPredicted RBP20.19■□□□□ 0.82
ITSN1-210ENST00000399353 ARXQ96QS3 562 aa20.19■□□□□ 0.82
ITSN1-210ENST00000399353 BRPF3Q9ULD4 1205 aa20.17■□□□□ 0.82
ITSN1-210ENST00000399353 VPS8Q8N3P4 1428 aa20.15■□□□□ 0.82
ITSN1-210ENST00000399353 TONSLQ96HA7 1378 aa20.15■□□□□ 0.82
ITSN1-210ENST00000399353 EEA1Q15075 1411 aa20.12■□□□□ 0.81
ITSN1-210ENST00000399353 RAB3GAP2Q9H2M9 1393 aa20.1■□□□□ 0.81
ITSN1-210ENST00000399353 UBE2Q2Q8WVN8 375 aa20.06■□□□□ 0.8
ITSN1-210ENST00000399353 CEP164Q9UPV0 1460 aa20.04■□□□□ 0.8
ITSN1-210ENST00000399353 ARID3CA6NKF2 412 aa20.04■□□□□ 0.8
ITSN1-210ENST00000399353 ZNF326Q5BKZ1 582 aaKnown RBP20.04■□□□□ 0.8
ITSN1-210ENST00000399353 CCNB3Q8WWL7 1395 aa20.03■□□□□ 0.8
ITSN1-210ENST00000399353 CCDC184Q52MB2 194 aa20.03■□□□□ 0.8
ITSN1-210ENST00000399353 SLC4A3P48751 1232 aa20.02■□□□□ 0.79
ITSN1-210ENST00000399353 PPM1GO15355 546 aaPredicted RBP19.96■□□□□ 0.79
ITSN1-210ENST00000399353 BAZ1AQ9NRL2 1556 aaPredicted RBP19.95■□□□□ 0.78
ITSN1-210ENST00000399353 GLIPR1L2Q4G1C9 344 aa19.94■□□□□ 0.78
ITSN1-210ENST00000399353 PKNOX2Q96KN3 472 aa19.94■□□□□ 0.78
ITSN1-210ENST00000399353 CHIC2Q9UKJ5 165 aa19.93■□□□□ 0.78
ITSN1-210ENST00000399353 VSIG10Q8N0Z9 540 aa19.92■□□□□ 0.78
ITSN1-210ENST00000399353 ARID4BQ4LE39 1312 aaPredicted RBP19.9■□□□□ 0.78
ITSN1-210ENST00000399353 GSE1Q14687 1217 aa19.88■□□□□ 0.77
ITSN1-210ENST00000399353 HSPA5P11021 654 aaKnown RBP19.87■□□□□ 0.77
ITSN1-210ENST00000399353 RAPGEF2Q9Y4G8 1499 aa19.87■□□□□ 0.77
ITSN1-210ENST00000399353 WDR97A6NE52 1622 aa19.86■□□□□ 0.77
ITSN1-210ENST00000399353 EIF4G2P78344 907 aaKnown RBP eCLIP19.85■□□□□ 0.77
ITSN1-210ENST00000399353 NACADO15069 1562 aa19.85■□□□□ 0.77
ITSN1-210ENST00000399353 NAP1L5Q96NT1 182 aaPredicted RBP19.84■□□□□ 0.77
ITSN1-210ENST00000399353 SETD5Q9C0A6 1442 aa19.84■□□□□ 0.77
ITSN1-210ENST00000399353 PDE4AP27815 886 aa19.82■□□□□ 0.76
ITSN1-210ENST00000399353 FRAT1Q92837 279 aaPredicted RBP19.82■□□□□ 0.76
ITSN1-210ENST00000399353 TMC1Q8TDI8 760 aa19.8■□□□□ 0.76
ITSN1-210ENST00000399353 SKAP1Q86WV1 359 aa19.78■□□□□ 0.76
ITSN1-210ENST00000399353 RRP7BPQ9NSQ0 103 aa19.77■□□□□ 0.76
ITSN1-210ENST00000399353 USP35Q9P2H5 1018 aa19.77■□□□□ 0.76
ITSN1-210ENST00000399353 AKNAQ7Z591 1439 aa19.77■□□□□ 0.76
ITSN1-210ENST00000399353 NFKBIBQ15653 356 aa19.75■□□□□ 0.75
ITSN1-210ENST00000399353 EXOC6Q8TAG9 804 aa19.74■□□□□ 0.75
ITSN1-210ENST00000399353 PRKRIP1Q9H875 184 aaPredicted RBP19.74■□□□□ 0.75
ITSN1-210ENST00000399353 RSPH6AQ9H0K4 717 aa19.72■□□□□ 0.75
ITSN1-210ENST00000399353 ZBED9Q6R2W3 1325 aa19.72■□□□□ 0.75
ITSN1-210ENST00000399353 WASHC2AQ641Q2 1341 aa19.71■□□□□ 0.75
ITSN1-210ENST00000399353 DDRGK1Q96HY6 314 aa19.71■□□□□ 0.75
ITSN1-210ENST00000399353 NUDCQ9Y266 331 aa19.71■□□□□ 0.75
ITSN1-210ENST00000399353 TOP2AP11388 1531 aaKnown RBP19.7■□□□□ 0.74
ITSN1-210ENST00000399353 KIF21BO75037 1637 aa19.69■□□□□ 0.74
ITSN1-210ENST00000399353 TCERG1O14776 1098 aaKnown RBP19.67■□□□□ 0.74
ITSN1-210ENST00000399353 RGS3P49796 1198 aa19.67■□□□□ 0.74
ITSN1-210ENST00000399353 FOXD1Q16676 465 aa19.66■□□□□ 0.74
ITSN1-210ENST00000399353 PLIN1O60240 522 aa19.64■□□□□ 0.73
ITSN1-210ENST00000399353 FRAT2O75474 233 aaPredicted RBP19.64■□□□□ 0.73
ITSN1-210ENST00000399353 MTUS2Q5JR59 1369 aa19.62■□□□□ 0.73
ITSN1-210ENST00000399353 ZMYND15Q9H091 742 aa19.6■□□□□ 0.73
ITSN1-210ENST00000399353 HSP90AA2PQ14568 343 aaPredicted RBP19.6■□□□□ 0.73
ITSN1-210ENST00000399353 KIF27Q86VH2 1401 aa19.6■□□□□ 0.73
ITSN1-210ENST00000399353 GZF1Q9H116 711 aaPredicted RBP19.59■□□□□ 0.73
ITSN1-210ENST00000399353 SLKQ9H2G2 1235 aaPredicted RBP19.59■□□□□ 0.73
ITSN1-210ENST00000399353 SMARCA2P51531 1590 aa19.58■□□□□ 0.72
ITSN1-210ENST00000399353 ZNF777Q9ULD5 760 aaPredicted RBP19.57■□□□□ 0.72
ITSN1-210ENST00000399353 RRBP1Q9P2E9 1410 aaKnown RBP19.56■□□□□ 0.72
ITSN1-210ENST00000399353 PNNQ9H307 717 aaKnown RBP19.56■□□□□ 0.72
ITSN1-210ENST00000399353 BACH2Q9BYV9 841 aa19.56■□□□□ 0.72
ITSN1-210ENST00000399353 HSP90AA1P07900 732 aaKnown RBP19.55■□□□□ 0.72
ITSN1-210ENST00000399353 C11orf95C9JLR9 678 aaPredicted RBP19.55■□□□□ 0.72
ITSN1-210ENST00000399353 RCAN3Q9UKA8 241 aa19.55■□□□□ 0.72
ITSN1-210ENST00000399353 SPRYD3Q8NCJ5 442 aa19.54■□□□□ 0.72
ITSN1-210ENST00000399353 MAPKBP1O60336 1514 aa19.52■□□□□ 0.72
ITSN1-210ENST00000399353 WASHC2CQ9Y4E1 1318 aa19.51■□□□□ 0.71
ITSN1-210ENST00000399353 L3MBTL2Q969R5 705 aa19.51■□□□□ 0.71
ITSN1-210ENST00000399353 ARID3AQ99856 593 aa19.5■□□□□ 0.71
ITSN1-210ENST00000399353 A0A0U1RQG5 324 aaPredicted RBP19.49■□□□□ 0.71
ITSN1-210ENST00000399353 SMARCA4P51532 1647 aa19.49■□□□□ 0.71
ITSN1-210ENST00000399353 ARAP1Q96P48 1450 aa19.49■□□□□ 0.71
ITSN1-210ENST00000399353 RRP1P56182 461 aaKnown RBP19.49■□□□□ 0.71
ITSN1-210ENST00000399353 PODXL2Q9NZ53 605 aa19.49■□□□□ 0.71
ITSN1-210ENST00000399353 KDM2AQ9Y2K7 1162 aa19.48■□□□□ 0.71
ITSN1-210ENST00000399353 PHLDB1Q86UU1 1377 aa19.47■□□□□ 0.71
ITSN1-210ENST00000399353 FAM43AQ8N2R8 423 aa19.47■□□□□ 0.71
ITSN1-210ENST00000399353 DCAF11Q8TEB1 546 aa19.46■□□□□ 0.71
ITSN1-210ENST00000399353 PLEKHG5O94827 1062 aa19.45■□□□□ 0.7
ITSN1-210ENST00000399353 SLC4A1APQ9BWU0 796 aaKnown RBP19.43■□□□□ 0.7
ITSN1-210ENST00000399353 POGKQ9P215 609 aa19.43■□□□□ 0.7
ITSN1-210ENST00000399353 CRBNQ96SW2 442 aa19.41■□□□□ 0.7
ITSN1-210ENST00000399353 CUX2O14529 1486 aa19.41■□□□□ 0.7
ITSN1-210ENST00000399353 CARMIL1Q5VZK9 1371 aa19.4■□□□□ 0.7
ITSN1-210ENST00000399353 CDCA7LQ96GN5 454 aa19.38■□□□□ 0.69
ITSN1-210ENST00000399353 MS4A1P11836 297 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms