RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 PRDM2Q13029 1718 aa21.11■□□□□ 0.97
SMIM11A-201ENST00000399292 ABCC8Q09428 1581 aa21.03■□□□□ 0.96
SMIM11A-201ENST00000399292 REM2Q8IYK8 340 aaPredicted RBP21.03■□□□□ 0.96
SMIM11A-201ENST00000399292 TOPBP1Q92547 1522 aa21■□□□□ 0.95
SMIM11A-201ENST00000399292 MKRN4PQ13434 485 aaPredicted RBP20.97■□□□□ 0.95
SMIM11A-201ENST00000399292 SPDYE2BA6NHP3 402 aa20.95■□□□□ 0.94
SMIM11A-201ENST00000399292 SPDYE6P0CI01 402 aa20.95■□□□□ 0.94
SMIM11A-201ENST00000399292 SPDYE2Q495Y8 402 aa20.95■□□□□ 0.94
SMIM11A-201ENST00000399292 EHMT2Q96KQ7 1210 aa20.95■□□□□ 0.94
SMIM11A-201ENST00000399292 IFT140Q96RY7 1462 aa20.94■□□□□ 0.94
SMIM11A-201ENST00000399292 DNMBPQ6XZF7 1577 aa20.93■□□□□ 0.94
SMIM11A-201ENST00000399292 ZNF608Q9ULD9 1512 aaPredicted RBP20.87■□□□□ 0.93
SMIM11A-201ENST00000399292 POLA1P09884 1462 aaPredicted RBP20.81■□□□□ 0.92
SMIM11A-201ENST00000399292 PITPNM1O00562 1244 aa20.81■□□□□ 0.92
SMIM11A-201ENST00000399292 SOGA1O94964 1423 aa20.79■□□□□ 0.92
SMIM11A-201ENST00000399292 AQRO60306 1485 aaKnown RBP eCLIP20.76■□□□□ 0.91
SMIM11A-201ENST00000399292 RAD54L2Q9Y4B4 1467 aa20.75■□□□□ 0.91
SMIM11A-201ENST00000399292 TARBP1Q13395 1621 aaKnown RBP20.75■□□□□ 0.91
SMIM11A-201ENST00000399292 CUX1P39880 1505 aa20.75■□□□□ 0.91
SMIM11A-201ENST00000399292 TRIM41Q8WV44 630 aa20.73■□□□□ 0.91
SMIM11A-201ENST00000399292 FGD5Q6ZNL6 1462 aa20.73■□□□□ 0.91
SMIM11A-201ENST00000399292 TDRD9Q8NDG6 1382 aaKnown RBP20.71■□□□□ 0.91
SMIM11A-201ENST00000399292 EIF4G3O43432 1585 aaKnown RBP20.7■□□□□ 0.9
SMIM11A-201ENST00000399292 PIP4P2Q8N4L2 257 aa20.69■□□□□ 0.9
SMIM11A-201ENST00000399292 ZNF692Q9BU19 519 aaPredicted RBP20.69■□□□□ 0.9
SMIM11A-201ENST00000399292 SSUH2Q9Y2M2 353 aa20.68■□□□□ 0.9
SMIM11A-201ENST00000399292 FXR2P51116 673 aaKnown RBP eCLIP20.61■□□□□ 0.89
SMIM11A-201ENST00000399292 WRNQ14191 1432 aaPredicted RBP eCLIP20.58■□□□□ 0.88
SMIM11A-201ENST00000399292 WDR97A6NE52 1622 aa20.57■□□□□ 0.88
SMIM11A-201ENST00000399292 SPDYE1Q8NFV5 336 aaPredicted RBP20.54■□□□□ 0.88
SMIM11A-201ENST00000399292 CHMP7Q8WUX9 453 aaPredicted RBP20.54■□□□□ 0.88
SMIM11A-201ENST00000399292 GRIN2BQ13224 1484 aa20.54■□□□□ 0.88
SMIM11A-201ENST00000399292 GAPVD1Q14C86 1478 aa20.52■□□□□ 0.88
SMIM11A-201ENST00000399292 ABCA10Q8WWZ4 1543 aa20.52■□□□□ 0.87
SMIM11A-201ENST00000399292 SNAPC4Q5SXM2 1469 aa20.51■□□□□ 0.87
SMIM11A-201ENST00000399292 TOP2BQ02880 1626 aa20.5■□□□□ 0.87
SMIM11A-201ENST00000399292 MAGI1Q96QZ7 1491 aaPredicted RBP20.49■□□□□ 0.87
SMIM11A-201ENST00000399292 SYNJ1O43426 1573 aa20.47■□□□□ 0.87
SMIM11A-201ENST00000399292 BIVM-ERCC5R4GMW8 1640 aa20.46■□□□□ 0.87
SMIM11A-201ENST00000399292 CLEC11AQ9Y240 323 aa20.46■□□□□ 0.87
SMIM11A-201ENST00000399292 CHD1O14646 1710 aa20.44■□□□□ 0.86
SMIM11A-201ENST00000399292 SYNJ2O15056 1496 aa20.42■□□□□ 0.86
SMIM11A-201ENST00000399292 ABCA5Q8WWZ7 1642 aa20.4■□□□□ 0.86
SMIM11A-201ENST00000399292 ARHGEF11O15085 1522 aa20.38■□□□□ 0.85
SMIM11A-201ENST00000399292 RIMBP3CA6NJZ7 1639 aa20.38■□□□□ 0.85
SMIM11A-201ENST00000399292 RIMBP3BA6NNM3 1639 aa20.38■□□□□ 0.85
SMIM11A-201ENST00000399292 RIMBP3Q9UFD9 1639 aa20.38■□□□□ 0.85
SMIM11A-201ENST00000399292 PBRM1Q86U86 1689 aa20.35■□□□□ 0.85
SMIM11A-201ENST00000399292 CYB5RLQ6IPT4 315 aa20.34■□□□□ 0.85
SMIM11A-201ENST00000399292 FHAD1B1AJZ9 1412 aa20.27■□□□□ 0.84
SMIM11A-201ENST00000399292 CLASP1Q7Z460 1538 aa20.27■□□□□ 0.84
SMIM11A-201ENST00000399292 HAX1O00165 279 aa20.27■□□□□ 0.84
SMIM11A-201ENST00000399292 PRKAR2AP13861 404 aaKnown RBP20.27■□□□□ 0.84
SMIM11A-201ENST00000399292 SP7Q8TDD2 431 aaPredicted RBP20.27■□□□□ 0.84
SMIM11A-201ENST00000399292 ERICH3Q5RHP9 1530 aa20.27■□□□□ 0.83
SMIM11A-201ENST00000399292 GRIN2AQ12879 1464 aa20.25■□□□□ 0.83
SMIM11A-201ENST00000399292 ADAMTS12P58397 1594 aa20.22■□□□□ 0.83
SMIM11A-201ENST00000399292 KIF27Q86VH2 1401 aa20.19■□□□□ 0.82
SMIM11A-201ENST00000399292 ARAP1Q96P48 1450 aa20.19■□□□□ 0.82
SMIM11A-201ENST00000399292 IGF1RP08069 1367 aa20.17■□□□□ 0.82
SMIM11A-201ENST00000399292 NUP160Q12769 1436 aa20.17■□□□□ 0.82
SMIM11A-201ENST00000399292 PRR29P0C7W0 189 aa20.16■□□□□ 0.82
SMIM11A-201ENST00000399292 CEP170Q5SW79 1584 aa20.12■□□□□ 0.81
SMIM11A-201ENST00000399292 JPH4Q96JJ6 628 aa20.07■□□□□ 0.8
SMIM11A-201ENST00000399292 SPDYE4A6NLX3 237 aa20.06■□□□□ 0.8
SMIM11A-201ENST00000399292 CHADLQ6NUI6 762 aa20.06■□□□□ 0.8
SMIM11A-201ENST00000399292 CARMIL1Q5VZK9 1371 aa20.04■□□□□ 0.8
SMIM11A-201ENST00000399292 EVX2Q03828 476 aa20.02■□□□□ 0.8
SMIM11A-201ENST00000399292 CUL7Q14999 1698 aa20■□□□□ 0.79
SMIM11A-201ENST00000399292 ERCC6L2Q5T890 1561 aa20■□□□□ 0.79
SMIM11A-201ENST00000399292 PRG4Q92954 1404 aaPredicted RBP19.99■□□□□ 0.79
SMIM11A-201ENST00000399292 SHROOM2Q13796 1616 aa19.98■□□□□ 0.79
SMIM11A-201ENST00000399292 KIAA0586Q9BVV6 1533 aa19.96■□□□□ 0.79
SMIM11A-201ENST00000399292 C19orf67A6NJJ6 358 aa19.94■□□□□ 0.78
SMIM11A-201ENST00000399292 RUSC2Q8N2Y8 1516 aa19.92■□□□□ 0.78
SMIM11A-201ENST00000399292 STAG3Q9UJ98 1225 aa19.9■□□□□ 0.78
SMIM11A-201ENST00000399292 RAPGEF2Q9Y4G8 1499 aa19.86■□□□□ 0.77
SMIM11A-201ENST00000399292 NPM1P06748 294 aaKnown RBP eCLIP19.79■□□□□ 0.76
SMIM11A-201ENST00000399292 FARP1Q9Y4F1 1045 aaPredicted RBP19.79■□□□□ 0.76
SMIM11A-201ENST00000399292 CARMIL2Q6F5E8 1435 aa19.77■□□□□ 0.76
SMIM11A-201ENST00000399292 TTBK1Q5TCY1 1321 aaPredicted RBP19.76■□□□□ 0.75
SMIM11A-201ENST00000399292 IQGAP2Q13576 1575 aa19.75■□□□□ 0.75
SMIM11A-201ENST00000399292 PTPRGP23470 1445 aa19.75■□□□□ 0.75
SMIM11A-201ENST00000399292 TNIKQ9UKE5 1360 aa19.72■□□□□ 0.75
SMIM11A-201ENST00000399292 PRXQ9BXM0 1461 aa19.72■□□□□ 0.75
SMIM11A-201ENST00000399292 CREBZFQ9NS37 354 aa19.7■□□□□ 0.74
SMIM11A-201ENST00000399292 DISP1Q96F81 1524 aa19.66■□□□□ 0.74
SMIM11A-201ENST00000399292 UGGT2Q9NYU1 1516 aa19.66■□□□□ 0.74
SMIM11A-201ENST00000399292 CD44P16070 742 aaKnown RBP19.64■□□□□ 0.73
SMIM11A-201ENST00000399292 EEA1Q15075 1411 aa19.64■□□□□ 0.73
SMIM11A-201ENST00000399292 ADCY10Q96PN6 1610 aa19.63■□□□□ 0.73
SMIM11A-201ENST00000399292 FAM9AQ8IZU1 332 aaPredicted RBP19.63■□□□□ 0.73
SMIM11A-201ENST00000399292 PROM2Q8N271 834 aa19.63■□□□□ 0.73
SMIM11A-201ENST00000399292 FAM69CQ0P6D2 419 aa19.61■□□□□ 0.73
SMIM11A-201ENST00000399292 GABBR2O75899 941 aa19.6■□□□□ 0.73
SMIM11A-201ENST00000399292 MAPKBP1O60336 1514 aa19.58■□□□□ 0.73
SMIM11A-201ENST00000399292 UACAQ9BZF9 1416 aa19.58■□□□□ 0.72
SMIM11A-201ENST00000399292 GOLGA3Q08378 1498 aa19.56■□□□□ 0.72
SMIM11A-201ENST00000399292 ABCC10Q5T3U5 1492 aa19.55■□□□□ 0.72
SMIM11A-201ENST00000399292 CTTNBP2Q8WZ74 1663 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms