RNA–Protein interactions for RNA: ENST00000397852.5

ITGB2-206, Transcript of integrin subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGB2, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB2-206ENST00000397852 CUX2O14529 1486 aa21.1■□□□□ 0.97
ITGB2-206ENST00000397852 KANK4Q5T7N3 995 aaPredicted RBP21.08■□□□□ 0.97
ITGB2-206ENST00000397852 DEKP35659 375 aaKnown RBP21.06■□□□□ 0.96
ITGB2-206ENST00000397852 RBM19Q9Y4C8 960 aaKnown RBP21.05■□□□□ 0.96
ITGB2-206ENST00000397852 PKNOX2Q96KN3 472 aa21.04■□□□□ 0.96
ITGB2-206ENST00000397852 FGD5Q6ZNL6 1462 aa21.04■□□□□ 0.96
ITGB2-206ENST00000397852 ARHGAP35Q9NRY4 1499 aa21.03■□□□□ 0.96
ITGB2-206ENST00000397852 IGF1RP08069 1367 aa21.03■□□□□ 0.96
ITGB2-206ENST00000397852 PLEKHG5O94827 1062 aa21.02■□□□□ 0.95
ITGB2-206ENST00000397852 MSH5O43196 834 aa20.96■□□□□ 0.95
ITGB2-206ENST00000397852 FANCD2Q9BXW9 1451 aa20.95■□□□□ 0.94
ITGB2-206ENST00000397852 CARMIL1Q5VZK9 1371 aa20.94■□□□□ 0.94
ITGB2-206ENST00000397852 PODXL2Q9NZ53 605 aa20.9■□□□□ 0.94
ITGB2-206ENST00000397852 NESP48681 1621 aa20.88■□□□□ 0.93
ITGB2-206ENST00000397852 RAD54L2Q9Y4B4 1467 aa20.87■□□□□ 0.93
ITGB2-206ENST00000397852 RRBP1Q9P2E9 1410 aaKnown RBP20.86■□□□□ 0.93
ITGB2-206ENST00000397852 DHX57Q6P158 1386 aaKnown RBP20.84■□□□□ 0.93
ITGB2-206ENST00000397852 ITGAEP38570 1179 aa20.83■□□□□ 0.93
ITGB2-206ENST00000397852 DNMBPQ6XZF7 1577 aa20.83■□□□□ 0.92
ITGB2-206ENST00000397852 P3H3Q8IVL6 736 aa20.81■□□□□ 0.92
ITGB2-206ENST00000397852 CCNB3Q8WWL7 1395 aa20.81■□□□□ 0.92
ITGB2-206ENST00000397852 TOPBP1Q92547 1522 aa20.8■□□□□ 0.92
ITGB2-206ENST00000397852 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.8■□□□□ 0.92
ITGB2-206ENST00000397852 POLA1P09884 1462 aaPredicted RBP20.79■□□□□ 0.92
ITGB2-206ENST00000397852 TIAM1Q13009 1591 aa20.78■□□□□ 0.92
ITGB2-206ENST00000397852 FANCIQ9NVI1 1328 aa20.78■□□□□ 0.92
ITGB2-206ENST00000397852 ABCA10Q8WWZ4 1543 aa20.75■□□□□ 0.91
ITGB2-206ENST00000397852 ATP1B4Q9UN42 357 aaPredicted RBP20.73■□□□□ 0.91
ITGB2-206ENST00000397852 PCF11O94913 1555 aaKnown RBP20.71■□□□□ 0.91
ITGB2-206ENST00000397852 LRRC9Q6ZRR7 1453 aa20.7■□□□□ 0.9
ITGB2-206ENST00000397852 FHOD3Q2V2M9 1422 aa20.69■□□□□ 0.9
ITGB2-206ENST00000397852 MAP3K1Q13233 1512 aa20.69■□□□□ 0.9
ITGB2-206ENST00000397852 BCANQ96GW7 911 aa20.67■□□□□ 0.9
ITGB2-206ENST00000397852 URB2Q14146 1524 aaKnown RBP20.67■□□□□ 0.9
ITGB2-206ENST00000397852 FHAD1B1AJZ9 1412 aa20.67■□□□□ 0.9
ITGB2-206ENST00000397852 PHLDB1Q86UU1 1377 aa20.66■□□□□ 0.9
ITGB2-206ENST00000397852 DNAJC5BQ9UF47 199 aa20.65■□□□□ 0.9
ITGB2-206ENST00000397852 CFAP43Q8NDM7 1665 aa20.64■□□□□ 0.89
ITGB2-206ENST00000397852 CUL7Q14999 1698 aa20.63■□□□□ 0.89
ITGB2-206ENST00000397852 LAMC3Q9Y6N6 1575 aa20.63■□□□□ 0.89
ITGB2-206ENST00000397852 RAB3GAP2Q9H2M9 1393 aa20.62■□□□□ 0.89
ITGB2-206ENST00000397852 FAM50AQ14320 339 aaKnown RBP20.62■□□□□ 0.89
ITGB2-206ENST00000397852 CTTNBP2Q8WZ74 1663 aa20.61■□□□□ 0.89
ITGB2-206ENST00000397852 TDRD9Q8NDG6 1382 aaKnown RBP20.6■□□□□ 0.89
ITGB2-206ENST00000397852 WDR97A6NE52 1622 aa20.6■□□□□ 0.89
ITGB2-206ENST00000397852 EFCAB5A4FU69 1503 aa20.57■□□□□ 0.88
ITGB2-206ENST00000397852 IL27Q8NEV9 243 aa20.57■□□□□ 0.88
ITGB2-206ENST00000397852 FYCO1Q9BQS8 1478 aa20.55■□□□□ 0.88
ITGB2-206ENST00000397852 FKBP8Q14318 412 aa20.54■□□□□ 0.88
ITGB2-206ENST00000397852 CASKIN1Q8WXD9 1431 aa20.53■□□□□ 0.88
ITGB2-206ENST00000397852 SETD5Q9C0A6 1442 aa20.53■□□□□ 0.88
ITGB2-206ENST00000397852 RTN4Q9NQC3 1192 aaKnown RBP20.52■□□□□ 0.88
ITGB2-206ENST00000397852 ABCA5Q8WWZ7 1642 aa20.52■□□□□ 0.88
ITGB2-206ENST00000397852 KIF21AQ7Z4S6 1674 aa20.52■□□□□ 0.87
ITGB2-206ENST00000397852 MAPKBP1O60336 1514 aa20.51■□□□□ 0.87
ITGB2-206ENST00000397852 PDS5BQ9NTI5 1447 aa20.51■□□□□ 0.87
ITGB2-206ENST00000397852 GAPVD1Q14C86 1478 aa20.51■□□□□ 0.87
ITGB2-206ENST00000397852 AQRO60306 1485 aaKnown RBP eCLIP20.47■□□□□ 0.87
ITGB2-206ENST00000397852 FMN1Q68DA7 1419 aa20.45■□□□□ 0.86
ITGB2-206ENST00000397852 SNAPC4Q5SXM2 1469 aa20.45■□□□□ 0.86
ITGB2-206ENST00000397852 SAMD9Q5K651 1589 aa20.41■□□□□ 0.86
ITGB2-206ENST00000397852 NEFLP07196 543 aa20.41■□□□□ 0.86
ITGB2-206ENST00000397852 SIN3AQ96ST3 1273 aa20.4■□□□□ 0.86
ITGB2-206ENST00000397852 GLIPR1L2Q4G1C9 344 aa20.4■□□□□ 0.86
ITGB2-206ENST00000397852 LRRIQ1Q96JM4 1722 aa20.4■□□□□ 0.86
ITGB2-206ENST00000397852 MTUS2Q5JR59 1369 aa20.39■□□□□ 0.85
ITGB2-206ENST00000397852 TARBP1Q13395 1621 aaKnown RBP20.38■□□□□ 0.85
ITGB2-206ENST00000397852 FGD6Q6ZV73 1430 aa20.36■□□□□ 0.85
ITGB2-206ENST00000397852 NBR1Q14596 966 aa20.36■□□□□ 0.85
ITGB2-206ENST00000397852 GRIN2BQ13224 1484 aa20.33■□□□□ 0.85
ITGB2-206ENST00000397852 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.31■□□□□ 0.847e-9■■■■■ 63.8
ITGB2-206ENST00000397852 PBRM1Q86U86 1689 aa20.31■□□□□ 0.84
ITGB2-206ENST00000397852 CDK11AQ9UQ88 783 aaPredicted RBP20.3■□□□□ 0.84
ITGB2-206ENST00000397852 ZMYND15Q9H091 742 aa20.29■□□□□ 0.84
ITGB2-206ENST00000397852 RTL5Q5HYW3 569 aaPredicted RBP20.29■□□□□ 0.84
ITGB2-206ENST00000397852 NCOA2Q15596 1464 aa20.29■□□□□ 0.84
ITGB2-206ENST00000397852 PTPRKQ15262 1439 aa20.28■□□□□ 0.84
ITGB2-206ENST00000397852 NOP58Q9Y2X3 529 aaKnown RBP20.25■□□□□ 0.83
ITGB2-206ENST00000397852 SUPT6HQ7KZ85 1726 aaKnown RBP20.24■□□□□ 0.83
ITGB2-206ENST00000397852 MYOM3Q5VTT5 1437 aa20.24■□□□□ 0.83
ITGB2-206ENST00000397852 CCDC18Q5T9S5 1454 aa20.24■□□□□ 0.83
ITGB2-206ENST00000397852 THOC2Q8NI27 1593 aaKnown RBP20.23■□□□□ 0.83
ITGB2-206ENST00000397852 MAGI3Q5TCQ9 1506 aa20.23■□□□□ 0.83
ITGB2-206ENST00000397852 EHBP1L1Q8N3D4 1523 aa20.23■□□□□ 0.83
ITGB2-206ENST00000397852 MRC2Q9UBG0 1479 aa20.22■□□□□ 0.83
ITGB2-206ENST00000397852 ADAMTS12P58397 1594 aa20.22■□□□□ 0.83
ITGB2-206ENST00000397852 ARID3CA6NKF2 412 aa20.21■□□□□ 0.83
ITGB2-206ENST00000397852 IQGAP2Q13576 1575 aa20.2■□□□□ 0.82
ITGB2-206ENST00000397852 PTPN23Q9H3S7 1636 aa20.2■□□□□ 0.82
ITGB2-206ENST00000397852 HFM1A2PYH4 1435 aa20.18■□□□□ 0.82
ITGB2-206ENST00000397852 VSIG10Q8N0Z9 540 aa20.18■□□□□ 0.82
ITGB2-206ENST00000397852 UGGT2Q9NYU1 1516 aa20.17■□□□□ 0.82
ITGB2-206ENST00000397852 HIRIP3Q9BW71 556 aaPredicted RBP20.17■□□□□ 0.82
ITGB2-206ENST00000397852 RSPH6AQ9H0K4 717 aa20.17■□□□□ 0.82
ITGB2-206ENST00000397852 ZNF608Q9ULD9 1512 aaPredicted RBP20.16■□□□□ 0.82
ITGB2-206ENST00000397852 HECW1Q76N89 1606 aa20.16■□□□□ 0.82
ITGB2-206ENST00000397852 C11orf95C9JLR9 678 aaPredicted RBP20.16■□□□□ 0.82
ITGB2-206ENST00000397852 NAIPQ13075 1403 aa20.15■□□□□ 0.82
ITGB2-206ENST00000397852 DDX10Q13206 875 aaKnown RBP20.15■□□□□ 0.82
ITGB2-206ENST00000397852 KCNH8Q96L42 1107 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms