RNA–Protein interactions for RNA: ENST00000395577.2

CDKN3-203, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-203ENST00000395577 MNX1P50219 401 aaPredicted RBP12.85□□□□□ -0.35
CDKN3-203ENST00000395577 RNF25Q96BH1 459 aaPredicted RBP12.85□□□□□ -0.35
CDKN3-203ENST00000395577 FAM212AQ96EL1 285 aa12.85□□□□□ -0.35
CDKN3-203ENST00000395577 HS6ST3Q8IZP7 471 aa12.84□□□□□ -0.35
CDKN3-203ENST00000395577 BCANQ96GW7 911 aa12.84□□□□□ -0.35
CDKN3-203ENST00000395577 KDM2AQ9Y2K7 1162 aa12.84□□□□□ -0.35
CDKN3-203ENST00000395577 RIOK3O14730 519 aaKnown RBP12.8□□□□□ -0.36
CDKN3-203ENST00000395577 TSHZ2Q9NRE2 1034 aa12.8□□□□□ -0.36
CDKN3-203ENST00000395577 TAOK2Q9UL54 1235 aa12.8□□□□□ -0.36
CDKN3-203ENST00000395577 PITPNM1O00562 1244 aa12.79□□□□□ -0.36
CDKN3-203ENST00000395577 RASEFQ8IZ41 740 aa12.77□□□□□ -0.37
CDKN3-203ENST00000395577 DNAJC5Q9H3Z4 198 aa12.74□□□□□ -0.37
CDKN3-203ENST00000395577 CHRM1P11229 460 aaPredicted RBP12.73□□□□□ -0.37
CDKN3-203ENST00000395577 VGFO15240 615 aaPredicted RBP12.71□□□□□ -0.37
CDKN3-203ENST00000395577 STK25O00506 426 aa12.68□□□□□ -0.38
CDKN3-203ENST00000395577 PYGBP11216 843 aa12.66□□□□□ -0.38
CDKN3-203ENST00000395577 NKX1-1Q15270 411 aaPredicted RBP12.66□□□□□ -0.38
CDKN3-203ENST00000395577 CHADLQ6NUI6 762 aa12.62□□□□□ -0.39
CDKN3-203ENST00000395577 SGIP1Q9BQI5 828 aa12.62□□□□□ -0.39
CDKN3-203ENST00000395577 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.6□□□□□ -0.39
CDKN3-203ENST00000395577 GTPBP6O43824 516 aaPredicted RBP12.6□□□□□ -0.39
CDKN3-203ENST00000395577 ZFP91Q96JP5 570 aaPredicted RBP12.6□□□□□ -0.39
CDKN3-203ENST00000395577 STK24Q9Y6E0 443 aa12.6□□□□□ -0.39
CDKN3-203ENST00000395577 BCL11BQ9C0K0 894 aaPredicted RBP12.59□□□□□ -0.39
CDKN3-203ENST00000395577 TSPYL2Q9H2G4 693 aaPredicted RBP12.57□□□□□ -0.4
CDKN3-203ENST00000395577 PRKCSHP14314 528 aaPredicted RBP12.56□□□□□ -0.4
CDKN3-203ENST00000395577 FARP1Q9Y4F1 1045 aaPredicted RBP12.55□□□□□ -0.4
CDKN3-203ENST00000395577 RYDENQ9NUL5 291 aaKnown RBP12.5□□□□□ -0.41
CDKN3-203ENST00000395577 PRKAR2AP13861 404 aaKnown RBP12.49□□□□□ -0.41
CDKN3-203ENST00000395577 ZNF467Q7Z7K2 595 aaPredicted RBP12.49□□□□□ -0.41
CDKN3-203ENST00000395577 TPRNQ4KMQ1 711 aa12.45□□□□□ -0.42
CDKN3-203ENST00000395577 NBR1Q14596 966 aa12.44□□□□□ -0.42
CDKN3-203ENST00000395577 FXR2P51116 673 aaKnown RBP eCLIP12.42□□□□□ -0.42
CDKN3-203ENST00000395577 PDAP1Q13442 181 aaKnown RBP12.42□□□□□ -0.42
CDKN3-203ENST00000395577 PCDHB8Q9UN66 801 aa12.41□□□□□ -0.42
CDKN3-203ENST00000395577 PCDHB13Q9Y5F0 798 aa12.41□□□□□ -0.42
CDKN3-203ENST00000395577 CCDC61Q9Y6R9 512 aa12.41□□□□□ -0.42
CDKN3-203ENST00000395577 PAK3O75914 559 aaPredicted RBP12.37□□□□□ -0.43
CDKN3-203ENST00000395577 ZNF579Q8NAF0 562 aaKnown RBP12.36□□□□□ -0.43
CDKN3-203ENST00000395577 PSEN1P49768 467 aa12.35□□□□□ -0.43
CDKN3-203ENST00000395577 CHRDL2Q6WN34 429 aa12.32□□□□□ -0.44
CDKN3-203ENST00000395577 PIP4P2Q8N4L2 257 aa12.3□□□□□ -0.44
CDKN3-203ENST00000395577 IFNL1Q8IU54 200 aa12.28□□□□□ -0.44
CDKN3-203ENST00000395577 MAP3K13O43283 966 aa12.26□□□□□ -0.45
CDKN3-203ENST00000395577 KIF12Q96FN5 646 aa12.25□□□□□ -0.45
CDKN3-203ENST00000395577 MFRPQ9BY79 579 aa12.25□□□□□ -0.45
CDKN3-203ENST00000395577 CADPS2Q86UW7 1296 aa12.23□□□□□ -0.45
CDKN3-203ENST00000395577 WDR70Q9NW82 654 aa12.21□□□□□ -0.45
CDKN3-203ENST00000395577 P3H3Q8IVL6 736 aa12.2□□□□□ -0.46
CDKN3-203ENST00000395577 EFCAB3Q8N7B9 438 aa12.2□□□□□ -0.46
CDKN3-203ENST00000395577 CABP2Q9NPB3 220 aa12.2□□□□□ -0.46
CDKN3-203ENST00000395577 ZRANB1Q9UGI0 708 aa12.2□□□□□ -0.46
CDKN3-203ENST00000395577 NLRP6P59044 892 aa12.17□□□□□ -0.46
CDKN3-203ENST00000395577 SOX12O15370 315 aa12.16□□□□□ -0.46
CDKN3-203ENST00000395577 CD44P16070 742 aaKnown RBP12.16□□□□□ -0.46
CDKN3-203ENST00000395577 PPP1R37O75864 691 aa12.14□□□□□ -0.47
CDKN3-203ENST00000395577 FBXO22Q8NEZ5 403 aa12.14□□□□□ -0.47
CDKN3-203ENST00000395577 PHF8Q9UPP1 1060 aa12.14□□□□□ -0.47
CDKN3-203ENST00000395577 PHF12Q96QT6 1004 aa12.13□□□□□ -0.47
CDKN3-203ENST00000395577 KCNV2Q8TDN2 545 aa12.11□□□□□ -0.47
CDKN3-203ENST00000395577 GOLGA2Q08379 1002 aa12.04□□□□□ -0.48
CDKN3-203ENST00000395577 TMEM106CQ9BVX2 250 aa12.03□□□□□ -0.48
CDKN3-203ENST00000395577 MS4A3Q96HJ5 214 aa12.01□□□□□ -0.49
CDKN3-203ENST00000395577 MS4A4AQ96JQ5 239 aa12□□□□□ -0.49
CDKN3-203ENST00000395577 E2F4Q16254 413 aa11.99□□□□□ -0.49
CDKN3-203ENST00000395577 C19orf67A6NJJ6 358 aa11.98□□□□□ -0.49
CDKN3-203ENST00000395577 TRPC6Q9Y210 931 aa11.98□□□□□ -0.49
CDKN3-203ENST00000395577 MKRN3Q13064 507 aaKnown RBP11.97□□□□□ -0.49
CDKN3-203ENST00000395577 ARHGEF1Q92888 912 aaKnown RBP11.97□□□□□ -0.49
CDKN3-203ENST00000395577 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.95□□□□□ -0.5
CDKN3-203ENST00000395577 NCKAP5LQ9HCH0 1330 aa11.94□□□□□ -0.5
CDKN3-203ENST00000395577 PDE4AP27815 886 aa11.94□□□□□ -0.5
CDKN3-203ENST00000395577 LMOD2Q6P5Q4 547 aa11.94□□□□□ -0.5
CDKN3-203ENST00000395577 LARP6Q9BRS8 491 aaKnown RBP11.94□□□□□ -0.5
CDKN3-203ENST00000395577 TULP1O00294 542 aaPredicted RBP11.92□□□□□ -0.5
CDKN3-203ENST00000395577 TIE1P35590 1138 aa11.9□□□□□ -0.5
CDKN3-203ENST00000395577 TTLL13PA6NNM8 815 aa11.88□□□□□ -0.51
CDKN3-203ENST00000395577 MFSD10Q14728 455 aa11.88□□□□□ -0.51
CDKN3-203ENST00000395577 CRISPLD2Q9H0B8 497 aa11.88□□□□□ -0.51
CDKN3-203ENST00000395577 DDX27Q96GQ7 796 aaKnown RBP11.87□□□□□ -0.51
CDKN3-203ENST00000395577 SEMA3EO15041 775 aa11.85□□□□□ -0.51
CDKN3-203ENST00000395577 BMP2KQ9NSY1 1161 aaPredicted RBP11.85□□□□□ -0.51
CDKN3-203ENST00000395577 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.85□□□□□ -0.51
CDKN3-203ENST00000395577 TESPA1A2RU30 521 aaPredicted RBP11.83□□□□□ -0.52
CDKN3-203ENST00000395577 ILDR1Q86SU0 546 aaPredicted RBP11.81□□□□□ -0.52
CDKN3-203ENST00000395577 TRIM35Q9UPQ4 493 aa11.81□□□□□ -0.52
CDKN3-203ENST00000395577 GALR2O43603 387 aaPredicted RBP11.8□□□□□ -0.52
CDKN3-203ENST00000395577 CAMK2BQ13554 666 aa11.78□□□□□ -0.52
CDKN3-203ENST00000395577 ARIH1Q9Y4X5 557 aaPredicted RBP11.78□□□□□ -0.52
CDKN3-203ENST00000395577 SMYD5Q6GMV2 418 aa11.76□□□□□ -0.53
CDKN3-203ENST00000395577 ZC3H15Q8WU90 426 aaKnown RBP11.76□□□□□ -0.53
CDKN3-203ENST00000395577 HAX1O00165 279 aa11.75□□□□□ -0.53
CDKN3-203ENST00000395577 GPHNQ9NQX3 736 aaPredicted RBP11.75□□□□□ -0.53
CDKN3-203ENST00000395577 PPP1R15BQ5SWA1 713 aa11.74□□□□□ -0.53
CDKN3-203ENST00000395577 CLCN6P51797 869 aa11.73□□□□□ -0.53
CDKN3-203ENST00000395577 DPY19L2Q6NUT2 758 aa11.73□□□□□ -0.53
CDKN3-203ENST00000395577 ATN1P54259 1190 aaPredicted RBP11.69□□□□□ -0.54
CDKN3-203ENST00000395577 EVX2Q03828 476 aa11.69□□□□□ -0.54
CDKN3-203ENST00000395577 MICALL2Q8IY33 904 aa11.69□□□□□ -0.54
CDKN3-203ENST00000395577 TMEM132AQ24JP5 1023 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms