RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 ADAMTS12P58397 1594 aa15.92■□□□□ 0.14
HIF1A-203ENST00000394997 THOC2Q8NI27 1593 aaKnown RBP15.92■□□□□ 0.14
HIF1A-203ENST00000394997 KANK4Q5T7N3 995 aaPredicted RBP15.91■□□□□ 0.14
HIF1A-203ENST00000394997 PELP1Q8IZL8 1130 aaKnown RBP15.9■□□□□ 0.14
HIF1A-203ENST00000394997 ARHGEF11O15085 1522 aa15.87■□□□□ 0.13
HIF1A-203ENST00000394997 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.87■□□□□ 0.13
HIF1A-203ENST00000394997 LRRC9Q6ZRR7 1453 aa15.87■□□□□ 0.13
HIF1A-203ENST00000394997 FYCO1Q9BQS8 1478 aa15.84■□□□□ 0.13
HIF1A-203ENST00000394997 GRIN2BQ13224 1484 aa15.83■□□□□ 0.12
HIF1A-203ENST00000394997 MAGI3Q5TCQ9 1506 aa15.83■□□□□ 0.12
HIF1A-203ENST00000394997 MAPKBP1O60336 1514 aa15.82■□□□□ 0.12
HIF1A-203ENST00000394997 GAPVD1Q14C86 1478 aa15.8■□□□□ 0.12
HIF1A-203ENST00000394997 CASKIN1Q8WXD9 1431 aa15.79■□□□□ 0.12
HIF1A-203ENST00000394997 PDS5BQ9NTI5 1447 aa15.79■□□□□ 0.12
HIF1A-203ENST00000394997 MRC2Q9UBG0 1479 aa15.77■□□□□ 0.11
HIF1A-203ENST00000394997 EIF4G3O43432 1585 aaKnown RBP15.76■□□□□ 0.11
HIF1A-203ENST00000394997 DHX57Q6P158 1386 aaKnown RBP15.76■□□□□ 0.11
HIF1A-203ENST00000394997 PHLDB1Q86UU1 1377 aa15.75■□□□□ 0.11
HIF1A-203ENST00000394997 FHOD3Q2V2M9 1422 aa15.73■□□□□ 0.11
HIF1A-203ENST00000394997 UGGT2Q9NYU1 1516 aa15.71■□□□□ 0.11
HIF1A-203ENST00000394997 ZNF608Q9ULD9 1512 aaPredicted RBP15.7■□□□□ 0.1
HIF1A-203ENST00000394997 IQGAP2Q13576 1575 aa15.69■□□□□ 0.1
HIF1A-203ENST00000394997 FHAD1B1AJZ9 1412 aa15.67■□□□□ 0.1
HIF1A-203ENST00000394997 TDRD9Q8NDG6 1382 aaKnown RBP15.67■□□□□ 0.1
HIF1A-203ENST00000394997 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.67■□□□□ 0.1
HIF1A-203ENST00000394997 TTBK1Q5TCY1 1321 aaPredicted RBP15.66■□□□□ 0.1
HIF1A-203ENST00000394997 CCNB3Q8WWL7 1395 aa15.66■□□□□ 0.1
HIF1A-203ENST00000394997 DISP1Q96F81 1524 aa15.65■□□□□ 0.1
HIF1A-203ENST00000394997 KIAA0556O60303 1618 aa15.65■□□□□ 0.1
HIF1A-203ENST00000394997 CEP170Q5SW79 1584 aa15.64■□□□□ 0.09
HIF1A-203ENST00000394997 GCC2Q8IWJ2 1684 aa15.64■□□□□ 0.09
HIF1A-203ENST00000394997 KDM5BQ9UGL1 1544 aa15.64■□□□□ 0.09
HIF1A-203ENST00000394997 PTPRKQ15262 1439 aa15.62■□□□□ 0.09
HIF1A-203ENST00000394997 SUPT6HQ7KZ85 1726 aaKnown RBP15.62■□□□□ 0.09
HIF1A-203ENST00000394997 IFT140Q96RY7 1462 aa15.62■□□□□ 0.09
HIF1A-203ENST00000394997 DENND4BO75064 1496 aaPredicted RBP15.62■□□□□ 0.09
HIF1A-203ENST00000394997 TCOF1Q13428 1488 aaKnown RBP15.6■□□□□ 0.09
HIF1A-203ENST00000394997 EHBP1L1Q8N3D4 1523 aa15.58■□□□□ 0.09
HIF1A-203ENST00000394997 ADCY10Q96PN6 1610 aa15.58■□□□□ 0.09
HIF1A-203ENST00000394997 CCER1Q8TC90 406 aaPredicted RBP15.58■□□□□ 0.09
HIF1A-203ENST00000394997 HECW1Q76N89 1606 aa15.58■□□□□ 0.08
HIF1A-203ENST00000394997 PTPN23Q9H3S7 1636 aa15.57■□□□□ 0.08
HIF1A-203ENST00000394997 KDM6BO15054 1643 aa15.57■□□□□ 0.08
HIF1A-203ENST00000394997 FMN1Q68DA7 1419 aa15.56■□□□□ 0.08
HIF1A-203ENST00000394997 CLSPNQ9HAW4 1339 aa15.56■□□□□ 0.08
HIF1A-203ENST00000394997 GRIN2AQ12879 1464 aa15.52■□□□□ 0.07
HIF1A-203ENST00000394997 FGD6Q6ZV73 1430 aa15.52■□□□□ 0.07
HIF1A-203ENST00000394997 CROCC2H7BZ55 1655 aa15.52■□□□□ 0.07
HIF1A-203ENST00000394997 NCOA2Q15596 1464 aa15.51■□□□□ 0.07
HIF1A-203ENST00000394997 RANGAP1P46060 587 aaPredicted RBP15.51■□□□□ 0.07
HIF1A-203ENST00000394997 RAB3GAP2Q9H2M9 1393 aa15.51■□□□□ 0.07
HIF1A-203ENST00000394997 EPRSP07814 1512 aaKnown RBP15.51■□□□□ 0.07
HIF1A-203ENST00000394997 RAPGEF6Q8TEU7 1601 aa15.5■□□□□ 0.07
HIF1A-203ENST00000394997 HNRNPUL2Q1KMD3 747 aaKnown RBP15.5■□□□□ 0.07
HIF1A-203ENST00000394997 CCDC18Q5T9S5 1454 aa15.48■□□□□ 0.07
HIF1A-203ENST00000394997 CDK13Q14004 1512 aaKnown RBP15.48■□□□□ 0.07
HIF1A-203ENST00000394997 KIAA0586Q9BVV6 1533 aa15.48■□□□□ 0.07
HIF1A-203ENST00000394997 NUP153P49790 1475 aaKnown RBP15.47■□□□□ 0.07
HIF1A-203ENST00000394997 NUP160Q12769 1436 aa15.47■□□□□ 0.07
HIF1A-203ENST00000394997 MAGI1Q96QZ7 1491 aaPredicted RBP15.47■□□□□ 0.07
HIF1A-203ENST00000394997 SHROOM2Q13796 1616 aa15.46■□□□□ 0.07
HIF1A-203ENST00000394997 HFM1A2PYH4 1435 aa15.44■□□□□ 0.06
HIF1A-203ENST00000394997 SETD5Q9C0A6 1442 aa15.44■□□□□ 0.06
HIF1A-203ENST00000394997 MYOM3Q5VTT5 1437 aa15.43■□□□□ 0.06
HIF1A-203ENST00000394997 DNMT1P26358 1616 aaKnown RBP15.43■□□□□ 0.06
HIF1A-203ENST00000394997 ABCA8O94911 1581 aa15.42■□□□□ 0.06
HIF1A-203ENST00000394997 CDC42BPAQ5VT25 1732 aa15.41■□□□□ 0.06
HIF1A-203ENST00000394997 NAIPQ13075 1403 aa15.41■□□□□ 0.06
HIF1A-203ENST00000394997 KIF14Q15058 1648 aa15.4■□□□□ 0.06
HIF1A-203ENST00000394997 SYNJ2O15056 1496 aa15.4■□□□□ 0.06
HIF1A-203ENST00000394997 CHD1O14646 1710 aa15.4■□□□□ 0.06
HIF1A-203ENST00000394997 AKNAQ7Z591 1439 aa15.39■□□□□ 0.05
HIF1A-203ENST00000394997 ADGBQ8N7X0 1667 aa15.37■□□□□ 0.05
HIF1A-203ENST00000394997 ZNF316A6NFI3 1004 aaPredicted RBP15.36■□□□□ 0.05
HIF1A-203ENST00000394997 P3H3Q8IVL6 736 aa15.35■□□□□ 0.05
HIF1A-203ENST00000394997 CENPBP07199 599 aaPredicted RBP15.34■□□□□ 0.05
HIF1A-203ENST00000394997 MYT1Q01538 1121 aa15.34■□□□□ 0.05
HIF1A-203ENST00000394997 SCAF1Q9H7N4 1312 aaKnown RBP15.34■□□□□ 0.05
HIF1A-203ENST00000394997 ITSN2Q9NZM3 1697 aa15.32■□□□□ 0.04
HIF1A-203ENST00000394997 DIEXFQ68CQ4 756 aaKnown RBP15.31■□□□□ 0.04
HIF1A-203ENST00000394997 APLP2Q06481 763 aa15.31■□□□□ 0.04
HIF1A-203ENST00000394997 YTHDC1Q96MU7 727 aaKnown RBP15.31■□□□□ 0.04
HIF1A-203ENST00000394997 MIA2Q96PC5 1412 aa15.31■□□□□ 0.04
HIF1A-203ENST00000394997 POLR1AO95602 1720 aaPredicted RBP15.3■□□□□ 0.04
HIF1A-203ENST00000394997 CDC42BPBQ9Y5S2 1711 aa15.29■□□□□ 0.04
HIF1A-203ENST00000394997 ABCC10Q5T3U5 1492 aa15.29■□□□□ 0.04
HIF1A-203ENST00000394997 UACAQ9BZF9 1416 aa15.28■□□□□ 0.04
HIF1A-203ENST00000394997 PLB1Q6P1J6 1458 aa15.25■□□□□ 0.03
HIF1A-203ENST00000394997 ADGRL2O95490 1459 aa15.22■□□□□ 0.03
HIF1A-203ENST00000394997 CLASP1Q7Z460 1538 aa15.22■□□□□ 0.03
HIF1A-203ENST00000394997 ABCC5O15440 1437 aa15.21■□□□□ 0.03
HIF1A-203ENST00000394997 ERCC6L2Q5T890 1561 aa15.2■□□□□ 0.02
HIF1A-203ENST00000394997 PREX2Q70Z35 1606 aa15.2■□□□□ 0.02
HIF1A-203ENST00000394997 NEUROD1Q13562 356 aa15.2■□□□□ 0.02
HIF1A-203ENST00000394997 GTF3C3Q9Y5Q9 886 aa15.2■□□□□ 0.02
HIF1A-203ENST00000394997 DAPK1P53355 1430 aa15.2■□□□□ 0.02
HIF1A-203ENST00000394997 GPATCH8Q9UKJ3 1502 aaKnown RBP15.2■□□□□ 0.02
HIF1A-203ENST00000394997 MTUS2Q5JR59 1369 aa15.18■□□□□ 0.02
HIF1A-203ENST00000394997 MIER1Q8N108 512 aa15.18■□□□□ 0.02
HIF1A-203ENST00000394997 ROCK1Q13464 1354 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms