RNA–Protein interactions for RNA: ENST00000394553.5

PDE8A-203, Transcript of phosphodiesterase 8A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDE8A, Length 3,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-203ENST00000394553 SUPT16HQ9Y5B9 1047 aaKnown RBP20.37■□□□□ 0.85
PDE8A-203ENST00000394553 FAM9BQ8IZU0 186 aa20.34■□□□□ 0.85
PDE8A-203ENST00000394553 KIF21BO75037 1637 aa20.32■□□□□ 0.84
PDE8A-203ENST00000394553 SENP3-EIF4A1A0A087X0R7 540 aa20.3■□□□□ 0.84
PDE8A-203ENST00000394553 SETD5Q9C0A6 1442 aa20.27■□□□□ 0.84
PDE8A-203ENST00000394553 MYT1LQ9UL68 1186 aa20.26■□□□□ 0.83
PDE8A-203ENST00000394553 TDRD9Q8NDG6 1382 aaKnown RBP20.23■□□□□ 0.83
PDE8A-203ENST00000394553 FHOD3Q2V2M9 1422 aa20.22■□□□□ 0.83
PDE8A-203ENST00000394553 ARAP1Q96P48 1450 aa20.22■□□□□ 0.83
PDE8A-203ENST00000394553 FHAD1B1AJZ9 1412 aa20.21■□□□□ 0.83
PDE8A-203ENST00000394553 CDK11AQ9UQ88 783 aaPredicted RBP20.21■□□□□ 0.83
PDE8A-203ENST00000394553 CADPSQ9ULU8 1353 aa20.21■□□□□ 0.83
PDE8A-203ENST00000394553 IGF1RP08069 1367 aa20.2■□□□□ 0.82
PDE8A-203ENST00000394553 FOXD1Q16676 465 aa20.18■□□□□ 0.82
PDE8A-203ENST00000394553 BICRAQ9NZM4 1560 aa20.18■□□□□ 0.82
PDE8A-203ENST00000394553 EIF4G2P78344 907 aaKnown RBP eCLIP20.16■□□□□ 0.822e-9■■□□□ 12.5
PDE8A-203ENST00000394553 SLC4A1APQ9BWU0 796 aaKnown RBP20.16■□□□□ 0.82
PDE8A-203ENST00000394553 MRS2Q9HD23 443 aa20.16■□□□□ 0.82
PDE8A-203ENST00000394553 SALL2Q9Y467 1007 aaPredicted RBP20.13■□□□□ 0.81
PDE8A-203ENST00000394553 PPP1R15AO75807 674 aaPredicted RBP20.12■□□□□ 0.81
PDE8A-203ENST00000394553 EIF4G1Q04637 1599 aaKnown RBP20.12■□□□□ 0.81
PDE8A-203ENST00000394553 KDM2AQ9Y2K7 1162 aa20.12■□□□□ 0.81
PDE8A-203ENST00000394553 ARHGAP35Q9NRY4 1499 aa20.1■□□□□ 0.81
PDE8A-203ENST00000394553 PRXQ9BXM0 1461 aa20.09■□□□□ 0.81
PDE8A-203ENST00000394553 PHLDB1Q86UU1 1377 aa20.08■□□□□ 0.8
PDE8A-203ENST00000394553 NCAPD3P42695 1498 aa20.05■□□□□ 0.8
PDE8A-203ENST00000394553 UNC13AQ9UPW8 1703 aa20.05■□□□□ 0.8
PDE8A-203ENST00000394553 CHMP7Q8WUX9 453 aaPredicted RBP20.04■□□□□ 0.8
PDE8A-203ENST00000394553 FGD5Q6ZNL6 1462 aa20.03■□□□□ 0.8
PDE8A-203ENST00000394553 CUX1P39880 1505 aa20.03■□□□□ 0.8
PDE8A-203ENST00000394553 RAD54L2Q9Y4B4 1467 aa20.03■□□□□ 0.8
PDE8A-203ENST00000394553 TOP2BQ02880 1626 aa20.02■□□□□ 0.8
PDE8A-203ENST00000394553 HSPA5P11021 654 aaKnown RBP20■□□□□ 0.79
PDE8A-203ENST00000394553 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20■□□□□ 0.792e-6■■□□□ 13.7
PDE8A-203ENST00000394553 TIMELESSQ9UNS1 1208 aa20■□□□□ 0.79
PDE8A-203ENST00000394553 FANCD2Q9BXW9 1451 aa19.97■□□□□ 0.79
PDE8A-203ENST00000394553 TSHZ2Q9NRE2 1034 aa19.97■□□□□ 0.79
PDE8A-203ENST00000394553 CFDP1Q9UEE9 299 aaPredicted RBP19.97■□□□□ 0.79
PDE8A-203ENST00000394553 CFTRP13569 1480 aa19.96■□□□□ 0.79
PDE8A-203ENST00000394553 TMC1Q8TDI8 760 aa19.95■□□□□ 0.78
PDE8A-203ENST00000394553 RRBP1Q9P2E9 1410 aaKnown RBP19.95■□□□□ 0.78
PDE8A-203ENST00000394553 ERICH3Q5RHP9 1530 aa19.94■□□□□ 0.78
PDE8A-203ENST00000394553 FMN1Q68DA7 1419 aa19.93■□□□□ 0.78
PDE8A-203ENST00000394553 TSPY4P0CV99 314 aa19.92■□□□□ 0.78
PDE8A-203ENST00000394553 TSPY10P0CW01 314 aa19.92■□□□□ 0.78
PDE8A-203ENST00000394553 CCER2I3L3R5 266 aa19.91■□□□□ 0.78
PDE8A-203ENST00000394553 RGL3Q3MIN7 710 aa19.91■□□□□ 0.78
PDE8A-203ENST00000394553 MPHOSPH9Q99550 1183 aa19.91■□□□□ 0.78
PDE8A-203ENST00000394553 LRRC9Q6ZRR7 1453 aa19.91■□□□□ 0.78
PDE8A-203ENST00000394553 L3MBTL2Q969R5 705 aa19.9■□□□□ 0.78
PDE8A-203ENST00000394553 NPM2Q86SE8 214 aaKnown RBP19.85■□□□□ 0.77
PDE8A-203ENST00000394553 B4GALNT3Q6L9W6 998 aa19.85■□□□□ 0.77
PDE8A-203ENST00000394553 CCDC136Q96JN2 1154 aa19.84■□□□□ 0.77
PDE8A-203ENST00000394553 PEG3Q9GZU2 1588 aa19.84■□□□□ 0.77
PDE8A-203ENST00000394553 PLEKHD1A6NEE1 506 aa19.83■□□□□ 0.77
PDE8A-203ENST00000394553 RBM19Q9Y4C8 960 aaKnown RBP19.83■□□□□ 0.76
PDE8A-203ENST00000394553 ANP32EQ9BTT0 268 aa19.82■□□□□ 0.76
PDE8A-203ENST00000394553 NESP48681 1621 aa19.81■□□□□ 0.76
PDE8A-203ENST00000394553 DAXXQ9UER7 740 aaPredicted RBP19.8■□□□□ 0.76
PDE8A-203ENST00000394553 CARD11Q9BXL7 1154 aa19.79■□□□□ 0.76
PDE8A-203ENST00000394553 CCDC18Q5T9S5 1454 aa19.78■□□□□ 0.76
PDE8A-203ENST00000394553 RTL5Q5HYW3 569 aaPredicted RBP19.77■□□□□ 0.75
PDE8A-203ENST00000394553 FGD6Q6ZV73 1430 aa19.76■□□□□ 0.75
PDE8A-203ENST00000394553 DNAJC5BQ9UF47 199 aa19.76■□□□□ 0.75
PDE8A-203ENST00000394553 PDS5BQ9NTI5 1447 aa19.76■□□□□ 0.75
PDE8A-203ENST00000394553 PKD2Q13563 968 aa19.76■□□□□ 0.75
PDE8A-203ENST00000394553 ZNF644Q9H582 1327 aaPredicted RBP19.74■□□□□ 0.75
PDE8A-203ENST00000394553 NBR1Q14596 966 aa19.74■□□□□ 0.75
PDE8A-203ENST00000394553 HMGXB3Q12766 1538 aa19.73■□□□□ 0.75
PDE8A-203ENST00000394553 DCAF11Q8TEB1 546 aa19.72■□□□□ 0.75
PDE8A-203ENST00000394553 WDR97A6NE52 1622 aa19.71■□□□□ 0.75
PDE8A-203ENST00000394553 ANP32AP39687 249 aaKnown RBP19.7■□□□□ 0.74
PDE8A-203ENST00000394553 TIAM1Q13009 1591 aa19.7■□□□□ 0.74
PDE8A-203ENST00000394553 PPP4R2Q9NY27 417 aa19.69■□□□□ 0.74
PDE8A-203ENST00000394553 GAPVD1Q14C86 1478 aa19.68■□□□□ 0.74
PDE8A-203ENST00000394553 CASKIN1Q8WXD9 1431 aa19.67■□□□□ 0.74
PDE8A-203ENST00000394553 POLA1P09884 1462 aaPredicted RBP19.65■□□□□ 0.74
PDE8A-203ENST00000394553 CHGAP10645 457 aaKnown RBP19.64■□□□□ 0.74
PDE8A-203ENST00000394553 SENP3Q9H4L4 574 aaPredicted RBP19.64■□□□□ 0.73
PDE8A-203ENST00000394553 MYOM3Q5VTT5 1437 aa19.63■□□□□ 0.73
PDE8A-203ENST00000394553 WASHC2AQ641Q2 1341 aa19.63■□□□□ 0.73
PDE8A-203ENST00000394553 AQRO60306 1485 aaKnown RBP eCLIP19.62■□□□□ 0.737e-9■■■■■ 35.6
PDE8A-203ENST00000394553 NCOA2Q15596 1464 aa19.62■□□□□ 0.73
PDE8A-203ENST00000394553 UACAQ9BZF9 1416 aa19.62■□□□□ 0.73
PDE8A-203ENST00000394553 PRKRIP1Q9H875 184 aaPredicted RBP19.61■□□□□ 0.73
PDE8A-203ENST00000394553 CC2D1BQ5T0F9 858 aaKnown RBP19.6■□□□□ 0.73
PDE8A-203ENST00000394553 BIVM-ERCC5R4GMW8 1640 aa19.6■□□□□ 0.73
PDE8A-203ENST00000394553 TOPBP1Q92547 1522 aa19.59■□□□□ 0.73
PDE8A-203ENST00000394553 ERCC6Q03468 1493 aa19.58■□□□□ 0.73
PDE8A-203ENST00000394553 NUP155O75694 1391 aa19.58■□□□□ 0.73
PDE8A-203ENST00000394553 HNRNPMP52272 730 aaKnown RBP eCLIP19.58■□□□□ 0.721e-6■■■■□ 23.2
PDE8A-203ENST00000394553 CCDC184Q52MB2 194 aa19.58■□□□□ 0.72
PDE8A-203ENST00000394553 FYCO1Q9BQS8 1478 aa19.56■□□□□ 0.72
PDE8A-203ENST00000394553 CC2D2AQ9P2K1 1620 aa19.56■□□□□ 0.72
PDE8A-203ENST00000394553 PCF11O94913 1555 aaKnown RBP19.54■□□□□ 0.72
PDE8A-203ENST00000394553 CANXP27824 592 aaKnown RBP19.53■□□□□ 0.72
PDE8A-203ENST00000394553 JPH4Q96JJ6 628 aa19.52■□□□□ 0.72
PDE8A-203ENST00000394553 ZBTB47Q9UFB7 747 aaPredicted RBP19.52■□□□□ 0.72
PDE8A-203ENST00000394553 NBPF8Q3BBV2 869 aa19.51■□□□□ 0.71
PDE8A-203ENST00000394553 WDR43Q15061 677 aaKnown RBP eCLIP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms