RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 MIER1Q8N108 512 aa28.84■■■□□ 2.21
RCCD1-201ENST00000394258 YTHDC1Q96MU7 727 aaKnown RBP28.84■■■□□ 2.21
RCCD1-201ENST00000394258 ABCA10Q8WWZ4 1543 aa28.8■■■□□ 2.2
RCCD1-201ENST00000394258 TIAM1Q13009 1591 aa28.76■■■□□ 2.19
RCCD1-201ENST00000394258 FHOD3Q2V2M9 1422 aa28.74■■■□□ 2.19
RCCD1-201ENST00000394258 CLSPNQ9HAW4 1339 aa28.71■■■□□ 2.19
RCCD1-201ENST00000394258 TDRD9Q8NDG6 1382 aaKnown RBP28.71■■■□□ 2.19
RCCD1-201ENST00000394258 URB2Q14146 1524 aaKnown RBP28.71■■■□□ 2.19
RCCD1-201ENST00000394258 LRRC9Q6ZRR7 1453 aa28.7■■■□□ 2.18
RCCD1-201ENST00000394258 FAM50AQ14320 339 aaKnown RBP28.69■■■□□ 2.18
RCCD1-201ENST00000394258 FHAD1B1AJZ9 1412 aa28.69■■■□□ 2.18
RCCD1-201ENST00000394258 PHLDB1Q86UU1 1377 aa28.68■■■□□ 2.18
RCCD1-201ENST00000394258 LAMC3Q9Y6N6 1575 aa28.65■■■□□ 2.18
RCCD1-201ENST00000394258 PCF11O94913 1555 aaKnown RBP28.64■■■□□ 2.18
RCCD1-201ENST00000394258 MAP3K1Q13233 1512 aa28.63■■■□□ 2.17
RCCD1-201ENST00000394258 RAB3GAP2Q9H2M9 1393 aa28.61■■■□□ 2.17
RCCD1-201ENST00000394258 PDS5BQ9NTI5 1447 aa28.56■■■□□ 2.16
RCCD1-201ENST00000394258 CUL7Q14999 1698 aa28.56■■■□□ 2.16
RCCD1-201ENST00000394258 GAPVD1Q14C86 1478 aa28.51■■■□□ 2.15
RCCD1-201ENST00000394258 EFCAB5A4FU69 1503 aa28.48■■■□□ 2.15
RCCD1-201ENST00000394258 CTTNBP2Q8WZ74 1663 aa28.48■■■□□ 2.15
RCCD1-201ENST00000394258 CFAP43Q8NDM7 1665 aa28.48■■■□□ 2.15
RCCD1-201ENST00000394258 CASKIN1Q8WXD9 1431 aa28.48■■■□□ 2.15
RCCD1-201ENST00000394258 SETD5Q9C0A6 1442 aa28.48■■■□□ 2.15
RCCD1-201ENST00000394258 FYCO1Q9BQS8 1478 aa28.47■■■□□ 2.15
RCCD1-201ENST00000394258 WDR97A6NE52 1622 aa28.46■■■□□ 2.15
RCCD1-201ENST00000394258 KIF21AQ7Z4S6 1674 aa28.44■■■□□ 2.14
RCCD1-201ENST00000394258 MYT1Q01538 1121 aa28.42■■■□□ 2.14
RCCD1-201ENST00000394258 ABCA5Q8WWZ7 1642 aa28.42■■■□□ 2.14
RCCD1-201ENST00000394258 FMN1Q68DA7 1419 aa28.41■■■□□ 2.14
RCCD1-201ENST00000394258 SIN3AQ96ST3 1273 aa28.37■■■□□ 2.13
RCCD1-201ENST00000394258 MAPKBP1O60336 1514 aa28.37■■■□□ 2.13
RCCD1-201ENST00000394258 AQRO60306 1485 aaKnown RBP eCLIP28.37■■■□□ 2.133e-7■■■■■ 49
RCCD1-201ENST00000394258 MTUS2Q5JR59 1369 aa28.35■■■□□ 2.13
RCCD1-201ENST00000394258 SNAPC4Q5SXM2 1469 aa28.33■■■□□ 2.12
RCCD1-201ENST00000394258 TARBP1Q13395 1621 aaKnown RBP28.26■■■□□ 2.11
RCCD1-201ENST00000394258 FGD6Q6ZV73 1430 aa28.24■■■□□ 2.11
RCCD1-201ENST00000394258 SAMD9Q5K651 1589 aa28.24■■■□□ 2.11
RCCD1-201ENST00000394258 ARID3CA6NKF2 412 aa28.2■■■□□ 2.11
RCCD1-201ENST00000394258 LRRIQ1Q96JM4 1722 aa28.18■■■□□ 2.1
RCCD1-201ENST00000394258 GRIN2BQ13224 1484 aa28.17■■■□□ 2.1
RCCD1-201ENST00000394258 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.16■■■□□ 2.1
RCCD1-201ENST00000394258 NCOA2Q15596 1464 aa28.14■■■□□ 2.1
RCCD1-201ENST00000394258 PTPRKQ15262 1439 aa28.14■■■□□ 2.09
RCCD1-201ENST00000394258 MRC2Q9UBG0 1479 aa28.1■■■□□ 2.09
RCCD1-201ENST00000394258 PBRM1Q86U86 1689 aa28.09■■■□□ 2.09
RCCD1-201ENST00000394258 MYOM3Q5VTT5 1437 aa28.08■■■□□ 2.09
RCCD1-201ENST00000394258 HIRIP3Q9BW71 556 aaPredicted RBP28.07■■■□□ 2.08
RCCD1-201ENST00000394258 ZNF608Q9ULD9 1512 aaPredicted RBP28.05■■■□□ 2.08
RCCD1-201ENST00000394258 CHIC2Q9UKJ5 165 aa28.05■■■□□ 2.08
RCCD1-201ENST00000394258 KCNH8Q96L42 1107 aa28.04■■■□□ 2.08
RCCD1-201ENST00000394258 CCDC18Q5T9S5 1454 aa28.04■■■□□ 2.08
RCCD1-201ENST00000394258 MAGI3Q5TCQ9 1506 aa28.03■■■□□ 2.08
RCCD1-201ENST00000394258 IQGAP2Q13576 1575 aa28.02■■■□□ 2.08
RCCD1-201ENST00000394258 SUPT6HQ7KZ85 1726 aaKnown RBP28.01■■■□□ 2.07
RCCD1-201ENST00000394258 RRP7BPQ9NSQ0 103 aa28.01■■■□□ 2.07
RCCD1-201ENST00000394258 ADAMTS12P58397 1594 aa28■■■□□ 2.07
RCCD1-201ENST00000394258 DDX10Q13206 875 aaKnown RBP28■■■□□ 2.07
RCCD1-201ENST00000394258 EHBP1L1Q8N3D4 1523 aa28■■■□□ 2.07
RCCD1-201ENST00000394258 HFM1A2PYH4 1435 aa27.99■■■□□ 2.07
RCCD1-201ENST00000394258 PPP1R15AO75807 674 aaPredicted RBP27.99■■■□□ 2.07
RCCD1-201ENST00000394258 THOC2Q8NI27 1593 aaKnown RBP27.98■■■□□ 2.07
RCCD1-201ENST00000394258 NAIPQ13075 1403 aa27.95■■■□□ 2.07
RCCD1-201ENST00000394258 TIMELESSQ9UNS1 1208 aa27.95■■■□□ 2.06
RCCD1-201ENST00000394258 CDK13Q14004 1512 aaKnown RBP27.95■■■□□ 2.06
RCCD1-201ENST00000394258 PTPN23Q9H3S7 1636 aa27.94■■■□□ 2.06
RCCD1-201ENST00000394258 UGGT2Q9NYU1 1516 aa27.94■■■□□ 2.06
RCCD1-201ENST00000394258 EPRSP07814 1512 aaKnown RBP27.93■■■□□ 2.06
RCCD1-201ENST00000394258 TONSLQ96HA7 1378 aa27.91■■■□□ 2.06
RCCD1-201ENST00000394258 UACAQ9BZF9 1416 aa27.91■■■□□ 2.06
RCCD1-201ENST00000394258 HECW1Q76N89 1606 aa27.9■■■□□ 2.06
RCCD1-201ENST00000394258 IFT140Q96RY7 1462 aa27.9■■■□□ 2.06
RCCD1-201ENST00000394258 TRIM52Q96A61 297 aa27.86■■■□□ 2.05
RCCD1-201ENST00000394258 ARHGEF11O15085 1522 aa27.86■■■□□ 2.05
RCCD1-201ENST00000394258 FBLN2P98095 1184 aa27.83■■■□□ 2.05
RCCD1-201ENST00000394258 WDR62O43379 1518 aa27.81■■■□□ 2.04
RCCD1-201ENST00000394258 ERCC6Q03468 1493 aa27.8■■■□□ 2.04
RCCD1-201ENST00000394258 SUPT16HQ9Y5B9 1047 aaKnown RBP27.78■■■□□ 2.04
RCCD1-201ENST00000394258 KIAA0586Q9BVV6 1533 aa27.78■■■□□ 2.04
RCCD1-201ENST00000394258 CHMP7Q8WUX9 453 aaPredicted RBP27.76■■■□□ 2.03
RCCD1-201ENST00000394258 DISP1Q96F81 1524 aa27.76■■■□□ 2.03
RCCD1-201ENST00000394258 TCOF1Q13428 1488 aaKnown RBP27.75■■■□□ 2.03
RCCD1-201ENST00000394258 GRIN2AQ12879 1464 aa27.74■■■□□ 2.03
RCCD1-201ENST00000394258 ZNF644Q9H582 1327 aaPredicted RBP27.73■■■□□ 2.03
RCCD1-201ENST00000394258 EIF4G3O43432 1585 aaKnown RBP27.73■■■□□ 2.03
RCCD1-201ENST00000394258 FOXD1Q16676 465 aa27.71■■■□□ 2.03
RCCD1-201ENST00000394258 KIAA0556O60303 1618 aa27.7■■■□□ 2.03
RCCD1-201ENST00000394258 KDM6BO15054 1643 aa27.7■■■□□ 2.02
RCCD1-201ENST00000394258 MIA2Q96PC5 1412 aa27.69■■■□□ 2.02
RCCD1-201ENST00000394258 NUP153P49790 1475 aaKnown RBP27.67■■■□□ 2.02
RCCD1-201ENST00000394258 MPHOSPH9Q99550 1183 aa27.66■■■□□ 2.02
RCCD1-201ENST00000394258 CDK11AQ9UQ88 783 aaPredicted RBP27.64■■■□□ 2.01
RCCD1-201ENST00000394258 DENND4BO75064 1496 aaPredicted RBP27.63■■■□□ 2.01
RCCD1-201ENST00000394258 ANP32CO43423 234 aa27.6■■■□□ 2.01
RCCD1-201ENST00000394258 GCC2Q8IWJ2 1684 aa27.6■■■□□ 2.01
RCCD1-201ENST00000394258 RAPGEF6Q8TEU7 1601 aa27.59■■■□□ 2.01
RCCD1-201ENST00000394258 PRG4Q92954 1404 aaPredicted RBP27.59■■■□□ 2.01
RCCD1-201ENST00000394258 ZNF777Q9ULD5 760 aaPredicted RBP27.57■■■□□ 2
RCCD1-201ENST00000394258 PLB1Q6P1J6 1458 aa27.57■■■□□ 2
RCCD1-201ENST00000394258 DAPK1P53355 1430 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms