RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 MAPKBP1O60336 1514 aa20.13■□□□□ 0.81
GAPVD1-205ENST00000394084 SETD5Q9C0A6 1442 aa20.13■□□□□ 0.81
GAPVD1-205ENST00000394084 CC2D2AQ9P2K1 1620 aa20.12■□□□□ 0.81
GAPVD1-205ENST00000394084 SIN3AQ96ST3 1273 aa20.11■□□□□ 0.81
GAPVD1-205ENST00000394084 MAP3K1Q13233 1512 aa20.11■□□□□ 0.81
GAPVD1-205ENST00000394084 FANCD2Q9BXW9 1451 aa20.11■□□□□ 0.81
GAPVD1-205ENST00000394084 RAD54L2Q9Y4B4 1467 aa20.11■□□□□ 0.81
GAPVD1-205ENST00000394084 FHAD1B1AJZ9 1412 aa20.1■□□□□ 0.81
GAPVD1-205ENST00000394084 FHOD3Q2V2M9 1422 aa20.1■□□□□ 0.81
GAPVD1-205ENST00000394084 PCF11O94913 1555 aaKnown RBP20.09■□□□□ 0.81
GAPVD1-205ENST00000394084 KCNH8Q96L42 1107 aa20.06■□□□□ 0.8
GAPVD1-205ENST00000394084 SUPT16HQ9Y5B9 1047 aaKnown RBP20.02■□□□□ 0.8
GAPVD1-205ENST00000394084 CFAP43Q8NDM7 1665 aa20.01■□□□□ 0.79
GAPVD1-205ENST00000394084 NESP48681 1621 aa20■□□□□ 0.79
GAPVD1-205ENST00000394084 POLA1P09884 1462 aaPredicted RBP19.99■□□□□ 0.79
GAPVD1-205ENST00000394084 WDR97A6NE52 1622 aa19.99■□□□□ 0.79
GAPVD1-205ENST00000394084 DDX10Q13206 875 aaKnown RBP19.99■□□□□ 0.79
GAPVD1-205ENST00000394084 TOPBP1Q92547 1522 aa19.98■□□□□ 0.79
GAPVD1-205ENST00000394084 DNMBPQ6XZF7 1577 aa19.98■□□□□ 0.79
GAPVD1-205ENST00000394084 HIRIP3Q9BW71 556 aaPredicted RBP19.97■□□□□ 0.79
GAPVD1-205ENST00000394084 ABCA10Q8WWZ4 1543 aa19.97■□□□□ 0.79
GAPVD1-205ENST00000394084 FYCO1Q9BQS8 1478 aa19.94■□□□□ 0.78
GAPVD1-205ENST00000394084 CASKIN1Q8WXD9 1431 aa19.93■□□□□ 0.78
GAPVD1-205ENST00000394084 EFCAB5A4FU69 1503 aa19.9■□□□□ 0.78
GAPVD1-205ENST00000394084 MTUS2Q5JR59 1369 aa19.87■□□□□ 0.77
GAPVD1-205ENST00000394084 TDRD9Q8NDG6 1382 aaKnown RBP19.87■□□□□ 0.77
GAPVD1-205ENST00000394084 PPP1R15AO75807 674 aaPredicted RBP19.85■□□□□ 0.77
GAPVD1-205ENST00000394084 CUL7Q14999 1698 aa19.85■□□□□ 0.77
GAPVD1-205ENST00000394084 CTTNBP2Q8WZ74 1663 aa19.85■□□□□ 0.77
GAPVD1-205ENST00000394084 FGD6Q6ZV73 1430 aa19.85■□□□□ 0.77
GAPVD1-205ENST00000394084 AQRO60306 1485 aaKnown RBP eCLIP19.85■□□□□ 0.772e-6■■■■□ 22.8
GAPVD1-205ENST00000394084 FMN1Q68DA7 1419 aa19.84■□□□□ 0.77
GAPVD1-205ENST00000394084 DNAJC5BQ9UF47 199 aa19.83■□□□□ 0.77
GAPVD1-205ENST00000394084 TIMELESSQ9UNS1 1208 aa19.82■□□□□ 0.76
GAPVD1-205ENST00000394084 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.81■□□□□ 0.76
GAPVD1-205ENST00000394084 URB2Q14146 1524 aaKnown RBP19.81■□□□□ 0.76
GAPVD1-205ENST00000394084 SNAPC4Q5SXM2 1469 aa19.8■□□□□ 0.76
GAPVD1-205ENST00000394084 PTPRKQ15262 1439 aa19.79■□□□□ 0.76
GAPVD1-205ENST00000394084 TONSLQ96HA7 1378 aa19.79■□□□□ 0.76
GAPVD1-205ENST00000394084 BCANQ96GW7 911 aa19.79■□□□□ 0.76
GAPVD1-205ENST00000394084 CCDC18Q5T9S5 1454 aa19.79■□□□□ 0.76
GAPVD1-205ENST00000394084 MYT1Q01538 1121 aa19.74■□□□□ 0.75
GAPVD1-205ENST00000394084 GAPVD1Q14C86 1478 aa19.73■□□□□ 0.75
GAPVD1-205ENST00000394084 NCOA2Q15596 1464 aa19.73■□□□□ 0.75
GAPVD1-205ENST00000394084 ANP32CO43423 234 aa19.73■□□□□ 0.75
GAPVD1-205ENST00000394084 TRIM52Q96A61 297 aa19.72■□□□□ 0.75
GAPVD1-205ENST00000394084 HFM1A2PYH4 1435 aa19.72■□□□□ 0.75
GAPVD1-205ENST00000394084 LRRIQ1Q96JM4 1722 aa19.71■□□□□ 0.75
GAPVD1-205ENST00000394084 FKBP8Q14318 412 aa19.71■□□□□ 0.75
GAPVD1-205ENST00000394084 UACAQ9BZF9 1416 aa19.7■□□□□ 0.74
GAPVD1-205ENST00000394084 TSHZ2Q9NRE2 1034 aa19.7■□□□□ 0.74
GAPVD1-205ENST00000394084 MYOM3Q5VTT5 1437 aa19.7■□□□□ 0.74
GAPVD1-205ENST00000394084 PTPN23Q9H3S7 1636 aa19.7■□□□□ 0.74
GAPVD1-205ENST00000394084 CHIC2Q9UKJ5 165 aa19.7■□□□□ 0.74
GAPVD1-205ENST00000394084 SAMD9Q5K651 1589 aa19.7■□□□□ 0.74
GAPVD1-205ENST00000394084 ABCA5Q8WWZ7 1642 aa19.69■□□□□ 0.74
GAPVD1-205ENST00000394084 RRP7BPQ9NSQ0 103 aa19.69■□□□□ 0.74
GAPVD1-205ENST00000394084 GRIN2BQ13224 1484 aa19.69■□□□□ 0.74
GAPVD1-205ENST00000394084 NAIPQ13075 1403 aa19.68■□□□□ 0.74
GAPVD1-205ENST00000394084 LAMC3Q9Y6N6 1575 aa19.68■□□□□ 0.74
GAPVD1-205ENST00000394084 ARID3CA6NKF2 412 aa19.67■□□□□ 0.74
GAPVD1-205ENST00000394084 CCER2I3L3R5 266 aa19.65■□□□□ 0.74
GAPVD1-205ENST00000394084 SUPT6HQ7KZ85 1726 aaKnown RBP19.63■□□□□ 0.73
GAPVD1-205ENST00000394084 PDS5BQ9NTI5 1447 aa19.62■□□□□ 0.73
GAPVD1-205ENST00000394084 EHBP1L1Q8N3D4 1523 aa19.62■□□□□ 0.73
GAPVD1-205ENST00000394084 MAGI3Q5TCQ9 1506 aa19.61■□□□□ 0.73
GAPVD1-205ENST00000394084 NEFLP07196 543 aa19.58■□□□□ 0.73
GAPVD1-205ENST00000394084 UGGT2Q9NYU1 1516 aa19.58■□□□□ 0.72
GAPVD1-205ENST00000394084 THOC2Q8NI27 1593 aaKnown RBP19.57■□□□□ 0.72
GAPVD1-205ENST00000394084 KIF21AQ7Z4S6 1674 aa19.55■□□□□ 0.72
GAPVD1-205ENST00000394084 KDM5BQ9UGL1 1544 aa19.52■□□□□ 0.72
GAPVD1-205ENST00000394084 HSPA5P11021 654 aaKnown RBP19.52■□□□□ 0.71
GAPVD1-205ENST00000394084 FOXD1Q16676 465 aa19.52■□□□□ 0.71
GAPVD1-205ENST00000394084 ARHGEF11O15085 1522 aa19.51■□□□□ 0.71
GAPVD1-205ENST00000394084 CDK13Q14004 1512 aaKnown RBP19.51■□□□□ 0.71
GAPVD1-205ENST00000394084 TARBP1Q13395 1621 aaKnown RBP19.51■□□□□ 0.71
GAPVD1-205ENST00000394084 KDM6BO15054 1643 aa19.49■□□□□ 0.71
GAPVD1-205ENST00000394084 EPRSP07814 1512 aaKnown RBP19.49■□□□□ 0.71
GAPVD1-205ENST00000394084 HECW1Q76N89 1606 aa19.48■□□□□ 0.71
GAPVD1-205ENST00000394084 DENND4BO75064 1496 aaPredicted RBP19.48■□□□□ 0.71
GAPVD1-205ENST00000394084 MPHOSPH9Q99550 1183 aa19.47■□□□□ 0.71
GAPVD1-205ENST00000394084 WASHC2AQ641Q2 1341 aa19.47■□□□□ 0.71
GAPVD1-205ENST00000394084 TCOF1Q13428 1488 aaKnown RBP19.47■□□□□ 0.71
GAPVD1-205ENST00000394084 HNRNPUQ00839 825 aaKnown RBP eCLIP19.47■□□□□ 0.71
GAPVD1-205ENST00000394084 IQGAP2Q13576 1575 aa19.46■□□□□ 0.71
GAPVD1-205ENST00000394084 PBRM1Q86U86 1689 aa19.44■□□□□ 0.7
GAPVD1-205ENST00000394084 L3MBTL2Q969R5 705 aa19.44■□□□□ 0.7
GAPVD1-205ENST00000394084 EIF4G2P78344 907 aaKnown RBP eCLIP19.43■□□□□ 0.7
GAPVD1-205ENST00000394084 GCC2Q8IWJ2 1684 aa19.43■□□□□ 0.7
GAPVD1-205ENST00000394084 IRX6P78412 446 aaPredicted RBP19.39■□□□□ 0.69
GAPVD1-205ENST00000394084 ADAMTS12P58397 1594 aa19.39■□□□□ 0.69
GAPVD1-205ENST00000394084 MIA2Q96PC5 1412 aa19.39■□□□□ 0.69
GAPVD1-205ENST00000394084 ZNF644Q9H582 1327 aaPredicted RBP19.39■□□□□ 0.69
GAPVD1-205ENST00000394084 WDR62O43379 1518 aa19.39■□□□□ 0.69
GAPVD1-205ENST00000394084 AKNAQ7Z591 1439 aa19.37■□□□□ 0.69
GAPVD1-205ENST00000394084 C11orf95C9JLR9 678 aaPredicted RBP19.36■□□□□ 0.69
GAPVD1-205ENST00000394084 CCDC184Q52MB2 194 aa19.36■□□□□ 0.69
GAPVD1-205ENST00000394084 NBPF8Q3BBV2 869 aa19.33■□□□□ 0.69
GAPVD1-205ENST00000394084 DAPK1P53355 1430 aa19.33■□□□□ 0.68
GAPVD1-205ENST00000394084 ZNF608Q9ULD9 1512 aaPredicted RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms