RNA–Protein interactions for RNA: ENST00000393405.6

SNX11-202, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX11, Length 2,733 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-202ENST00000393405 DNMBPQ6XZF7 1577 aa22.19■■□□□ 1.14
SNX11-202ENST00000393405 NESP48681 1621 aa22.17■■□□□ 1.14
SNX11-202ENST00000393405 LRRC9Q6ZRR7 1453 aa22.16■■□□□ 1.14
SNX11-202ENST00000393405 POLA1P09884 1462 aaPredicted RBP22.16■■□□□ 1.14
SNX11-202ENST00000393405 TOPBP1Q92547 1522 aa22.15■■□□□ 1.14
SNX11-202ENST00000393405 P3H3Q8IVL6 736 aa22.15■■□□□ 1.14
SNX11-202ENST00000393405 ABCA10Q8WWZ4 1543 aa22.14■■□□□ 1.13
SNX11-202ENST00000393405 PCF11O94913 1555 aaKnown RBP22.14■■□□□ 1.13
SNX11-202ENST00000393405 PHLDB1Q86UU1 1377 aa22.12■■□□□ 1.13
SNX11-202ENST00000393405 FHAD1B1AJZ9 1412 aa22.12■■□□□ 1.13
SNX11-202ENST00000393405 RAB3GAP2Q9H2M9 1393 aa22.12■■□□□ 1.13
SNX11-202ENST00000393405 CFAP43Q8NDM7 1665 aa22.11■■□□□ 1.13
SNX11-202ENST00000393405 ANP32EQ9BTT0 268 aa22.1■■□□□ 1.13
SNX11-202ENST00000393405 FHOD3Q2V2M9 1422 aa22.08■■□□□ 1.13
SNX11-202ENST00000393405 SUPT16HQ9Y5B9 1047 aaKnown RBP22.06■■□□□ 1.12
SNX11-202ENST00000393405 MAPKBP1O60336 1514 aa22.06■■□□□ 1.12
SNX11-202ENST00000393405 ATP1B4Q9UN42 357 aaPredicted RBP22.04■■□□□ 1.12
SNX11-202ENST00000393405 CUL7Q14999 1698 aa22.03■■□□□ 1.12
SNX11-202ENST00000393405 TSHZ2Q9NRE2 1034 aa22.02■■□□□ 1.12
SNX11-202ENST00000393405 CTTNBP2Q8WZ74 1663 aa22.01■■□□□ 1.11
SNX11-202ENST00000393405 SETD5Q9C0A6 1442 aa22.01■■□□□ 1.11
SNX11-202ENST00000393405 FAM50AQ14320 339 aaKnown RBP22.01■■□□□ 1.11
SNX11-202ENST00000393405 EFCAB5A4FU69 1503 aa22■■□□□ 1.11
SNX11-202ENST00000393405 FYCO1Q9BQS8 1478 aa21.99■■□□□ 1.11
SNX11-202ENST00000393405 URB2Q14146 1524 aaKnown RBP21.98■■□□□ 1.11
SNX11-202ENST00000393405 WDR97A6NE52 1622 aa21.98■■□□□ 1.11
SNX11-202ENST00000393405 CASKIN1Q8WXD9 1431 aa21.96■■□□□ 1.11
SNX11-202ENST00000393405 LAMC3Q9Y6N6 1575 aa21.95■■□□□ 1.1
SNX11-202ENST00000393405 AQRO60306 1485 aaKnown RBP eCLIP21.93■■□□□ 1.1
SNX11-202ENST00000393405 TDRD9Q8NDG6 1382 aaKnown RBP21.91■■□□□ 1.1
SNX11-202ENST00000393405 ABCA5Q8WWZ7 1642 aa21.89■■□□□ 1.09
SNX11-202ENST00000393405 SNAPC4Q5SXM2 1469 aa21.88■■□□□ 1.09
SNX11-202ENST00000393405 FMN1Q68DA7 1419 aa21.87■■□□□ 1.09
SNX11-202ENST00000393405 SIN3AQ96ST3 1273 aa21.87■■□□□ 1.09
SNX11-202ENST00000393405 DNAJC5BQ9UF47 199 aa21.86■■□□□ 1.09
SNX11-202ENST00000393405 GAPVD1Q14C86 1478 aa21.84■■□□□ 1.09
SNX11-202ENST00000393405 SAMD9Q5K651 1589 aa21.82■■□□□ 1.08
SNX11-202ENST00000393405 LRRIQ1Q96JM4 1722 aa21.82■■□□□ 1.08
SNX11-202ENST00000393405 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.81■■□□□ 1.08
SNX11-202ENST00000393405 FGD6Q6ZV73 1430 aa21.81■■□□□ 1.08
SNX11-202ENST00000393405 KIF21AQ7Z4S6 1674 aa21.79■■□□□ 1.08
SNX11-202ENST00000393405 PDS5BQ9NTI5 1447 aa21.79■■□□□ 1.08
SNX11-202ENST00000393405 MTUS2Q5JR59 1369 aa21.78■■□□□ 1.08
SNX11-202ENST00000393405 GRIN2BQ13224 1484 aa21.74■■□□□ 1.07
SNX11-202ENST00000393405 PTPRKQ15262 1439 aa21.72■■□□□ 1.07
SNX11-202ENST00000393405 TARBP1Q13395 1621 aaKnown RBP21.71■■□□□ 1.07
SNX11-202ENST00000393405 NCOA2Q15596 1464 aa21.7■■□□□ 1.06
SNX11-202ENST00000393405 CCDC18Q5T9S5 1454 aa21.69■■□□□ 1.06
SNX11-202ENST00000393405 KCNH8Q96L42 1107 aa21.68■■□□□ 1.06
SNX11-202ENST00000393405 THOC2Q8NI27 1593 aaKnown RBP21.67■■□□□ 1.06
SNX11-202ENST00000393405 TIMELESSQ9UNS1 1208 aa21.67■■□□□ 1.06
SNX11-202ENST00000393405 MYOM3Q5VTT5 1437 aa21.66■■□□□ 1.06
SNX11-202ENST00000393405 BCANQ96GW7 911 aa21.66■■□□□ 1.06
SNX11-202ENST00000393405 HFM1A2PYH4 1435 aa21.66■■□□□ 1.06
SNX11-202ENST00000393405 SUPT6HQ7KZ85 1726 aaKnown RBP21.65■■□□□ 1.06
SNX11-202ENST00000393405 PTPN23Q9H3S7 1636 aa21.65■■□□□ 1.06
SNX11-202ENST00000393405 PPP1R15AO75807 674 aaPredicted RBP21.64■■□□□ 1.06
SNX11-202ENST00000393405 DDX10Q13206 875 aaKnown RBP21.64■■□□□ 1.06
SNX11-202ENST00000393405 EHBP1L1Q8N3D4 1523 aa21.64■■□□□ 1.05
SNX11-202ENST00000393405 MAGI3Q5TCQ9 1506 aa21.63■■□□□ 1.05
SNX11-202ENST00000393405 PBRM1Q86U86 1689 aa21.62■■□□□ 1.05
SNX11-202ENST00000393405 HIRIP3Q9BW71 556 aaPredicted RBP21.62■■□□□ 1.05
SNX11-202ENST00000393405 NAIPQ13075 1403 aa21.61■■□□□ 1.05
SNX11-202ENST00000393405 UACAQ9BZF9 1416 aa21.61■■□□□ 1.05
SNX11-202ENST00000393405 UGGT2Q9NYU1 1516 aa21.59■■□□□ 1.05
SNX11-202ENST00000393405 ARHGEF11O15085 1522 aa21.57■■□□□ 1.04
SNX11-202ENST00000393405 TONSLQ96HA7 1378 aa21.55■■□□□ 1.04
SNX11-202ENST00000393405 IQGAP2Q13576 1575 aa21.55■■□□□ 1.04
SNX11-202ENST00000393405 ADAMTS12P58397 1594 aa21.54■■□□□ 1.04
SNX11-202ENST00000393405 HECW1Q76N89 1606 aa21.52■■□□□ 1.04
SNX11-202ENST00000393405 EPRSP07814 1512 aaKnown RBP21.5■■□□□ 1.03
SNX11-202ENST00000393405 CDK13Q14004 1512 aaKnown RBP21.49■■□□□ 1.03
SNX11-202ENST00000393405 FKBP8Q14318 412 aa21.49■■□□□ 1.03
SNX11-202ENST00000393405 RRP7BPQ9NSQ0 103 aa21.48■■□□□ 1.03
SNX11-202ENST00000393405 CCER2I3L3R5 266 aa21.48■■□□□ 1.03
SNX11-202ENST00000393405 CHIC2Q9UKJ5 165 aa21.48■■□□□ 1.03
SNX11-202ENST00000393405 TCOF1Q13428 1488 aaKnown RBP21.47■■□□□ 1.03
SNX11-202ENST00000393405 MRC2Q9UBG0 1479 aa21.47■■□□□ 1.03
SNX11-202ENST00000393405 RBM19Q9Y4C8 960 aaKnown RBP21.47■■□□□ 1.03
SNX11-202ENST00000393405 ARID3CA6NKF2 412 aa21.46■■□□□ 1.03
SNX11-202ENST00000393405 WDR62O43379 1518 aa21.45■■□□□ 1.02
SNX11-202ENST00000393405 KDM5BQ9UGL1 1544 aa21.45■■□□□ 1.02
SNX11-202ENST00000393405 GCC2Q8IWJ2 1684 aa21.44■■□□□ 1.02
SNX11-202ENST00000393405 NEFLP07196 543 aa21.43■■□□□ 1.02
SNX11-202ENST00000393405 ZNF608Q9ULD9 1512 aaPredicted RBP21.42■■□□□ 1.02
SNX11-202ENST00000393405 KDM6BO15054 1643 aa21.42■■□□□ 1.02
SNX11-202ENST00000393405 DENND4BO75064 1496 aaPredicted RBP21.42■■□□□ 1.02
SNX11-202ENST00000393405 PRKCSHP14314 528 aaPredicted RBP21.39■■□□□ 1.02
SNX11-202ENST00000393405 ANP32CO43423 234 aa21.37■■□□□ 1.01
SNX11-202ENST00000393405 MIA2Q96PC5 1412 aa21.37■■□□□ 1.01
SNX11-202ENST00000393405 AKNAQ7Z591 1439 aa21.36■■□□□ 1.01
SNX11-202ENST00000393405 TRIM52Q96A61 297 aa21.35■■□□□ 1.01
SNX11-202ENST00000393405 MSH5O43196 834 aa21.35■■□□□ 1.01
SNX11-202ENST00000393405 IFT140Q96RY7 1462 aa21.34■■□□□ 1.01
SNX11-202ENST00000393405 KIAA0556O60303 1618 aa21.33■■□□□ 1
SNX11-202ENST00000393405 DISP1Q96F81 1524 aa21.32■■□□□ 1
SNX11-202ENST00000393405 KIAA0586Q9BVV6 1533 aa21.31■■□□□ 1
SNX11-202ENST00000393405 NUP153P49790 1475 aaKnown RBP21.28■■□□□ 1
SNX11-202ENST00000393405 MPHOSPH9Q99550 1183 aa21.28■■□□□ 1
SNX11-202ENST00000393405 FOXD1Q16676 465 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms