RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 SYNJ1O43426 1573 aa22.88■■□□□ 1.25
PHTF1-205ENST00000393357 FAM9BQ8IZU0 186 aa22.86■■□□□ 1.25
PHTF1-205ENST00000393357 BAZ1BQ9UIG0 1483 aaKnown RBP22.84■■□□□ 1.25
PHTF1-205ENST00000393357 PPP1R15AO75807 674 aaPredicted RBP22.83■■□□□ 1.25
PHTF1-205ENST00000393357 POLR3GLQ9BT43 218 aa22.8■■□□□ 1.24
PHTF1-205ENST00000393357 DEKP35659 375 aaKnown RBP22.8■■□□□ 1.24
PHTF1-205ENST00000393357 WDR97A6NE52 1622 aa22.77■■□□□ 1.24
PHTF1-205ENST00000393357 ARAP1Q96P48 1450 aa22.76■■□□□ 1.23
PHTF1-205ENST00000393357 RTN4Q9NQC3 1192 aaKnown RBP22.76■■□□□ 1.23
PHTF1-205ENST00000393357 CCDC184Q52MB2 194 aa22.71■■□□□ 1.23
PHTF1-205ENST00000393357 ATAD2BQ9ULI0 1458 aa22.68■■□□□ 1.22
PHTF1-205ENST00000393357 TONSLQ96HA7 1378 aa22.68■■□□□ 1.22
PHTF1-205ENST00000393357 PAK3O75914 559 aaPredicted RBP22.65■■□□□ 1.22
PHTF1-205ENST00000393357 NPM2Q86SE8 214 aaKnown RBP22.64■■□□□ 1.22
PHTF1-205ENST00000393357 SETD5Q9C0A6 1442 aa22.63■■□□□ 1.21
PHTF1-205ENST00000393357 CCER2I3L3R5 266 aa22.62■■□□□ 1.21
PHTF1-205ENST00000393357 CHIC2Q9UKJ5 165 aa22.61■■□□□ 1.21
PHTF1-205ENST00000393357 ANO8Q9HCE9 1232 aaPredicted RBP22.6■■□□□ 1.21
PHTF1-205ENST00000393357 ARID3CA6NKF2 412 aa22.59■■□□□ 1.21
PHTF1-205ENST00000393357 RRBP1Q9P2E9 1410 aaKnown RBP22.59■■□□□ 1.21
PHTF1-205ENST00000393357 MAPKBP1O60336 1514 aa22.59■■□□□ 1.21
PHTF1-205ENST00000393357 CCDC136Q96JN2 1154 aa22.58■■□□□ 1.21
PHTF1-205ENST00000393357 MRS2Q9HD23 443 aa22.56■■□□□ 1.2
PHTF1-205ENST00000393357 PHLDB1Q86UU1 1377 aa22.56■■□□□ 1.2
PHTF1-205ENST00000393357 FANCIQ9NVI1 1328 aa22.54■■□□□ 1.2
PHTF1-205ENST00000393357 FOXD1Q16676 465 aa22.53■■□□□ 1.2
PHTF1-205ENST00000393357 PRKCSHP14314 528 aaPredicted RBP22.52■■□□□ 1.2
PHTF1-205ENST00000393357 PPP4R2Q9NY27 417 aa22.52■■□□□ 1.19
PHTF1-205ENST00000393357 SALL2Q9Y467 1007 aaPredicted RBP22.52■■□□□ 1.19
PHTF1-205ENST00000393357 RRP7BPQ9NSQ0 103 aa22.51■■□□□ 1.19
PHTF1-205ENST00000393357 NOP58Q9Y2X3 529 aaKnown RBP22.5■■□□□ 1.19
PHTF1-205ENST00000393357 HSPA5P11021 654 aaKnown RBP22.48■■□□□ 1.19
PHTF1-205ENST00000393357 RTL5Q5HYW3 569 aaPredicted RBP22.48■■□□□ 1.19
PHTF1-205ENST00000393357 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.46■■□□□ 1.19
PHTF1-205ENST00000393357 ZNF326Q5BKZ1 582 aaKnown RBP22.46■■□□□ 1.19
PHTF1-205ENST00000393357 ARHGAP35Q9NRY4 1499 aa22.45■■□□□ 1.18
PHTF1-205ENST00000393357 LAS1LQ9Y4W2 734 aaKnown RBP22.44■■□□□ 1.18
PHTF1-205ENST00000393357 IL27Q8NEV9 243 aa22.41■■□□□ 1.18
PHTF1-205ENST00000393357 WASHC2AQ641Q2 1341 aa22.4■■□□□ 1.18
PHTF1-205ENST00000393357 KIF27Q86VH2 1401 aa22.38■■□□□ 1.17
PHTF1-205ENST00000393357 PRXQ9BXM0 1461 aa22.37■■□□□ 1.17
PHTF1-205ENST00000393357 ANP32AP39687 249 aaKnown RBP22.36■■□□□ 1.17
PHTF1-205ENST00000393357 C11orf95C9JLR9 678 aaPredicted RBP22.35■■□□□ 1.17
PHTF1-205ENST00000393357 ZBTB47Q9UFB7 747 aaPredicted RBP22.35■■□□□ 1.17
PHTF1-205ENST00000393357 NCAPD3P42695 1498 aa22.31■■□□□ 1.16
PHTF1-205ENST00000393357 EIF4G2P78344 907 aaKnown RBP eCLIP22.31■■□□□ 1.16
PHTF1-205ENST00000393357 HMGXB3Q12766 1538 aa22.29■■□□□ 1.16
PHTF1-205ENST00000393357 FHOD3Q2V2M9 1422 aa22.26■■□□□ 1.15
PHTF1-205ENST00000393357 TOP2BQ02880 1626 aa22.26■■□□□ 1.15
PHTF1-205ENST00000393357 AKNAQ7Z591 1439 aa22.25■■□□□ 1.15
PHTF1-205ENST00000393357 CUX2O14529 1486 aa22.25■■□□□ 1.15
PHTF1-205ENST00000393357 PRKRIP1Q9H875 184 aaPredicted RBP22.24■■□□□ 1.15
PHTF1-205ENST00000393357 SKAP1Q86WV1 359 aa22.23■■□□□ 1.15
PHTF1-205ENST00000393357 LRRC9Q6ZRR7 1453 aa22.22■■□□□ 1.15
PHTF1-205ENST00000393357 L3MBTL2Q969R5 705 aa22.21■■□□□ 1.15
PHTF1-205ENST00000393357 TIMELESSQ9UNS1 1208 aa22.2■■□□□ 1.14
PHTF1-205ENST00000393357 CARMIL1Q5VZK9 1371 aa22.2■■□□□ 1.14
PHTF1-205ENST00000393357 BIVM-ERCC5R4GMW8 1640 aa22.19■■□□□ 1.14
PHTF1-205ENST00000393357 EIF5BO60841 1220 aaKnown RBP22.19■■□□□ 1.14
PHTF1-205ENST00000393357 MTUS2Q5JR59 1369 aa22.18■■□□□ 1.14
PHTF1-205ENST00000393357 NEFMP07197 916 aa22.18■■□□□ 1.14
PHTF1-205ENST00000393357 IPO9Q96P70 1041 aaKnown RBP22.17■■□□□ 1.14
PHTF1-205ENST00000393357 IGF1RP08069 1367 aa22.15■■□□□ 1.14
PHTF1-205ENST00000393357 ERICH3Q5RHP9 1530 aa22.13■■□□□ 1.13
PHTF1-205ENST00000393357 CUX1P39880 1505 aa22.13■■□□□ 1.13
PHTF1-205ENST00000393357 SLC4A3P48751 1232 aa22.12■■□□□ 1.13
PHTF1-205ENST00000393357 CCDC18Q5T9S5 1454 aa22.12■■□□□ 1.13
PHTF1-205ENST00000393357 TIAM1Q13009 1591 aa22.11■■□□□ 1.13
PHTF1-205ENST00000393357 MYT1LQ9UL68 1186 aa22.11■■□□□ 1.13
PHTF1-205ENST00000393357 AQRO60306 1485 aaKnown RBP eCLIP22.1■■□□□ 1.133e-7■■■■■ 36.6
PHTF1-205ENST00000393357 PTPRKQ15262 1439 aa22.08■■□□□ 1.12
PHTF1-205ENST00000393357 CFTRP13569 1480 aa22.07■■□□□ 1.12
PHTF1-205ENST00000393357 ZBED9Q6R2W3 1325 aa22.06■■□□□ 1.12
PHTF1-205ENST00000393357 NBPF8Q3BBV2 869 aa22.06■■□□□ 1.12
PHTF1-205ENST00000393357 TMC1Q8TDI8 760 aa22.06■■□□□ 1.12
PHTF1-205ENST00000393357 EXOC6Q8TAG9 804 aa22.03■■□□□ 1.12
PHTF1-205ENST00000393357 PLIN1O60240 522 aa22.01■■□□□ 1.11
PHTF1-205ENST00000393357 MPHOSPH9Q99550 1183 aa22.01■■□□□ 1.11
PHTF1-205ENST00000393357 BRPF3Q9ULD4 1205 aa22■■□□□ 1.11
PHTF1-205ENST00000393357 KIF7Q2M1P5 1343 aa22■■□□□ 1.11
PHTF1-205ENST00000393357 ERICH6BQ5W0A0 696 aa21.99■■□□□ 1.11
PHTF1-205ENST00000393357 NUDCQ9Y266 331 aa21.98■■□□□ 1.11
PHTF1-205ENST00000393357 KDM2AQ9Y2K7 1162 aa21.98■■□□□ 1.11
PHTF1-205ENST00000393357 CCDC7Q96M83 1385 aa21.97■■□□□ 1.11
PHTF1-205ENST00000393357 ARXQ96QS3 562 aa21.97■■□□□ 1.11
PHTF1-205ENST00000393357 FHAD1B1AJZ9 1412 aa21.97■■□□□ 1.11
PHTF1-205ENST00000393357 SLC4A1APQ9BWU0 796 aaKnown RBP21.96■■□□□ 1.11
PHTF1-205ENST00000393357 CNTLNQ9NXG0 1405 aa21.96■■□□□ 1.11
PHTF1-205ENST00000393357 FGD6Q6ZV73 1430 aa21.95■■□□□ 1.1
PHTF1-205ENST00000393357 UACAQ9BZF9 1416 aa21.94■■□□□ 1.1
PHTF1-205ENST00000393357 PCF11O94913 1555 aaKnown RBP21.92■■□□□ 1.1
PHTF1-205ENST00000393357 PRDM2Q13029 1718 aa21.91■■□□□ 1.1
PHTF1-205ENST00000393357 PDE4AP27815 886 aa21.9■■□□□ 1.1
PHTF1-205ENST00000393357 DAXXQ9UER7 740 aaPredicted RBP21.89■■□□□ 1.1
PHTF1-205ENST00000393357 ZNF777Q9ULD5 760 aaPredicted RBP21.89■■□□□ 1.09
PHTF1-205ENST00000393357 NAIPQ13075 1403 aa21.87■■□□□ 1.09
PHTF1-205ENST00000393357 FMN1Q68DA7 1419 aa21.85■■□□□ 1.09
PHTF1-205ENST00000393357 CDCA7LQ96GN5 454 aa21.85■■□□□ 1.09
PHTF1-205ENST00000393357 CADPSQ9ULU8 1353 aa21.83■■□□□ 1.08
PHTF1-205ENST00000393357 ZNF644Q9H582 1327 aaPredicted RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms