RNA–Protein interactions for RNA: ENST00000393356.5

CNOT6-202, Transcript of CCR4-NOT transcription complex subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT6, Length 6,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT6-202ENST00000393356 KIF27Q86VH2 1401 aa24.39■■□□□ 1.5
CNOT6-202ENST00000393356 FAM9BQ8IZU0 186 aa24.39■■□□□ 1.49
CNOT6-202ENST00000393356 DDX10Q13206 875 aaKnown RBP24.38■■□□□ 1.49
CNOT6-202ENST00000393356 DCAF1Q9Y4B6 1507 aa24.37■■□□□ 1.49
CNOT6-202ENST00000393356 TMC1Q8TDI8 760 aa24.34■■□□□ 1.49
CNOT6-202ENST00000393356 BAZ1AQ9NRL2 1556 aaPredicted RBP24.32■■□□□ 1.48
CNOT6-202ENST00000393356 LMOD2Q6P5Q4 547 aa24.31■■□□□ 1.48
CNOT6-202ENST00000393356 GOLGA3Q08378 1498 aa24.28■■□□□ 1.48
CNOT6-202ENST00000393356 CUX2O14529 1486 aa24.24■■□□□ 1.47
CNOT6-202ENST00000393356 NPM2Q86SE8 214 aaKnown RBP24.21■■□□□ 1.47
CNOT6-202ENST00000393356 CEP162Q5TB80 1403 aa24.19■■□□□ 1.46
CNOT6-202ENST00000393356 PPM1GO15355 546 aaPredicted RBP24.19■■□□□ 1.46
CNOT6-202ENST00000393356 SENP3-EIF4A1A0A087X0R7 540 aa24.18■■□□□ 1.46
CNOT6-202ENST00000393356 WDR43Q15061 677 aaKnown RBP eCLIP24.18■■□□□ 1.46
CNOT6-202ENST00000393356 ARXQ96QS3 562 aa24.16■■□□□ 1.46
CNOT6-202ENST00000393356 HNRNPUQ00839 825 aaKnown RBP eCLIP24.15■■□□□ 1.46
CNOT6-202ENST00000393356 GTF3C3Q9Y5Q9 886 aa24.15■■□□□ 1.46
CNOT6-202ENST00000393356 TDRD9Q8NDG6 1382 aaKnown RBP24.14■■□□□ 1.45
CNOT6-202ENST00000393356 CARMIL1Q5VZK9 1371 aa24.12■■□□□ 1.45
CNOT6-202ENST00000393356 PDS5BQ9NTI5 1447 aa24.11■■□□□ 1.45
CNOT6-202ENST00000393356 GGT6Q6P531 493 aa24.07■■□□□ 1.44
CNOT6-202ENST00000393356 POGKQ9P215 609 aa24.07■■□□□ 1.44
CNOT6-202ENST00000393356 MROH2BQ7Z745 1585 aa24.07■■□□□ 1.44
CNOT6-202ENST00000393356 MYO15BQ96JP2 1530 aa24.07■■□□□ 1.44
CNOT6-202ENST00000393356 CCNB3Q8WWL7 1395 aa24.05■■□□□ 1.44
CNOT6-202ENST00000393356 SOGA1O94964 1423 aa24.04■■□□□ 1.44
CNOT6-202ENST00000393356 CCDC88BA6NC98 1476 aa24.03■■□□□ 1.44
CNOT6-202ENST00000393356 CEP164Q9UPV0 1460 aa24.03■■□□□ 1.44
CNOT6-202ENST00000393356 EEA1Q15075 1411 aa24.02■■□□□ 1.44
CNOT6-202ENST00000393356 ABCC8Q09428 1581 aa24.01■■□□□ 1.43
CNOT6-202ENST00000393356 SOX12O15370 315 aa23.99■■□□□ 1.43
CNOT6-202ENST00000393356 SAFB2Q14151 953 aaKnown RBP eCLIP23.99■■□□□ 1.43
CNOT6-202ENST00000393356 MRS2Q9HD23 443 aa23.99■■□□□ 1.43
CNOT6-202ENST00000393356 SMARCA2P51531 1590 aa23.98■■□□□ 1.43
CNOT6-202ENST00000393356 TNNT2P45379 298 aaPredicted RBP23.98■■□□□ 1.43
CNOT6-202ENST00000393356 EIF4G2P78344 907 aaKnown RBP eCLIP23.96■■□□□ 1.431e-10■■■■■ 36.7
CNOT6-202ENST00000393356 CARD11Q9BXL7 1154 aa23.93■■□□□ 1.42
CNOT6-202ENST00000393356 HSP90AA1P07900 732 aaKnown RBP23.93■■□□□ 1.42
CNOT6-202ENST00000393356 CYB5RLQ6IPT4 315 aa23.91■■□□□ 1.42
CNOT6-202ENST00000393356 WIZO95785 1651 aa23.89■■□□□ 1.42
CNOT6-202ENST00000393356 FKBP8Q14318 412 aa23.89■■□□□ 1.41
CNOT6-202ENST00000393356 STK26Q9P289 416 aa23.88■■□□□ 1.41
CNOT6-202ENST00000393356 SIN3AQ96ST3 1273 aa23.87■■□□□ 1.41
CNOT6-202ENST00000393356 LAS1LQ9Y4W2 734 aaKnown RBP23.86■■□□□ 1.41
CNOT6-202ENST00000393356 CARMIL2Q6F5E8 1435 aa23.86■■□□□ 1.41
CNOT6-202ENST00000393356 KANK1Q14678 1352 aa23.85■■□□□ 1.41
CNOT6-202ENST00000393356 TNIKQ9UKE5 1360 aa23.85■■□□□ 1.41
CNOT6-202ENST00000393356 NEUROD2Q15784 382 aa23.84■■□□□ 1.41
CNOT6-202ENST00000393356 IRX6P78412 446 aaPredicted RBP23.81■■□□□ 1.4
CNOT6-202ENST00000393356 KNSTRNQ9Y448 316 aa23.81■■□□□ 1.4
CNOT6-202ENST00000393356 ANP32AP39687 249 aaKnown RBP23.81■■□□□ 1.4
CNOT6-202ENST00000393356 NPHP1O15259 732 aa23.8■■□□□ 1.4
CNOT6-202ENST00000393356 DCAF11Q8TEB1 546 aa23.8■■□□□ 1.4
CNOT6-202ENST00000393356 FOXD1Q16676 465 aa23.78■■□□□ 1.4
CNOT6-202ENST00000393356 NUTM2DQ5VT03 806 aaPredicted RBP23.77■■□□□ 1.4
CNOT6-202ENST00000393356 CC2D1BQ5T0F9 858 aaKnown RBP23.75■■□□□ 1.39
CNOT6-202ENST00000393356 SRPK2P78362 688 aaKnown RBP23.75■■□□□ 1.39
CNOT6-202ENST00000393356 CADPSQ9ULU8 1353 aa23.75■■□□□ 1.39
CNOT6-202ENST00000393356 CFAP53Q96M91 514 aa23.74■■□□□ 1.39
CNOT6-202ENST00000393356 FHAD1B1AJZ9 1412 aa23.74■■□□□ 1.39
CNOT6-202ENST00000393356 PAK3O75914 559 aaPredicted RBP23.72■■□□□ 1.39
CNOT6-202ENST00000393356 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.72■■□□□ 1.39
CNOT6-202ENST00000393356 HDGFP51858 240 aaKnown RBP23.71■■□□□ 1.39
CNOT6-202ENST00000393356 HNRNPMP52272 730 aaKnown RBP eCLIP23.71■■□□□ 1.397e-7■■■■□ 21.6
CNOT6-202ENST00000393356 MYH16Q9H6N6 1097 aa23.68■■□□□ 1.38
CNOT6-202ENST00000393356 CDCA8Q53HL2 280 aa23.68■■□□□ 1.38
CNOT6-202ENST00000393356 U2SURPO15042 1029 aaKnown RBP23.68■■□□□ 1.38
CNOT6-202ENST00000393356 JPH4Q96JJ6 628 aa23.66■■□□□ 1.38
CNOT6-202ENST00000393356 UPF2Q9HAU5 1272 aaKnown RBP23.66■■□□□ 1.38
CNOT6-202ENST00000393356 EFCAB2Q5VUJ9 269 aa23.65■■□□□ 1.38
CNOT6-202ENST00000393356 KIF3BO15066 747 aa23.64■■□□□ 1.38
CNOT6-202ENST00000393356 KANK4Q5T7N3 995 aaPredicted RBP23.63■■□□□ 1.37
CNOT6-202ENST00000393356 CCDC136Q96JN2 1154 aa23.63■■□□□ 1.37
CNOT6-202ENST00000393356 OSCARQ8IYS5 282 aa23.63■■□□□ 1.37
CNOT6-202ENST00000393356 AEBP2Q6ZN18 517 aaPredicted RBP23.62■■□□□ 1.37
CNOT6-202ENST00000393356 MIER1Q8N108 512 aa23.62■■□□□ 1.37
CNOT6-202ENST00000393356 ATAD2BQ9ULI0 1458 aa23.61■■□□□ 1.37
CNOT6-202ENST00000393356 MAPK8IP3Q9UPT6 1336 aa23.61■■□□□ 1.37
CNOT6-202ENST00000393356 PKD2Q13563 968 aa23.6■■□□□ 1.37
CNOT6-202ENST00000393356 CCDC9Q9Y3X0 531 aaKnown RBP23.6■■□□□ 1.37
CNOT6-202ENST00000393356 TOP2AP11388 1531 aaKnown RBP23.6■■□□□ 1.37
CNOT6-202ENST00000393356 ACIN1Q9UKV3 1341 aaKnown RBP23.59■■□□□ 1.37
CNOT6-202ENST00000393356 TULP1O00294 542 aaPredicted RBP23.59■■□□□ 1.37
CNOT6-202ENST00000393356 FANCD2Q9BXW9 1451 aa23.59■■□□□ 1.37
CNOT6-202ENST00000393356 ARHGAP35Q9NRY4 1499 aa23.57■■□□□ 1.36
CNOT6-202ENST00000393356 FHOD3Q2V2M9 1422 aa23.56■■□□□ 1.36
CNOT6-202ENST00000393356 NUTM2FA1L443 756 aa23.55■■□□□ 1.36
CNOT6-202ENST00000393356 TAOK2Q9UL54 1235 aa23.52■■□□□ 1.36
CNOT6-202ENST00000393356 NUDCQ9Y266 331 aa23.52■■□□□ 1.36
CNOT6-202ENST00000393356 WASHC2CQ9Y4E1 1318 aa23.51■■□□□ 1.35
CNOT6-202ENST00000393356 CSB-PGBD3P0DP91 1061 aa23.51■■□□□ 1.35
CNOT6-202ENST00000393356 ANP32BQ92688 251 aaKnown RBP23.51■■□□□ 1.35
CNOT6-202ENST00000393356 SMARCA4P51532 1647 aa23.5■■□□□ 1.35
CNOT6-202ENST00000393356 TMF1P82094 1093 aa23.49■■□□□ 1.35
CNOT6-202ENST00000393356 SPAG9O60271 1321 aaKnown RBP23.48■■□□□ 1.35
CNOT6-202ENST00000393356 TPRNQ4KMQ1 711 aa23.46■■□□□ 1.35
CNOT6-202ENST00000393356 NUP155O75694 1391 aa23.46■■□□□ 1.35
CNOT6-202ENST00000393356 EID1Q9Y6B2 187 aa23.45■■□□□ 1.34
CNOT6-202ENST00000393356 FTSJ3Q8IY81 847 aaKnown RBP23.44■■□□□ 1.34
CNOT6-202ENST00000393356 ZNF330Q9Y3S2 320 aaPredicted RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms