RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 KANK4Q5T7N3 995 aaPredicted RBP23.07■■□□□ 1.28
TRAF3IP1-202ENST00000391993 PAK3O75914 559 aaPredicted RBP23.06■■□□□ 1.28
TRAF3IP1-202ENST00000391993 FANCIQ9NVI1 1328 aa23.06■■□□□ 1.28
TRAF3IP1-202ENST00000391993 CCDC88BA6NC98 1476 aa23.02■■□□□ 1.28
TRAF3IP1-202ENST00000391993 BAZ1BQ9UIG0 1483 aaKnown RBP23.01■■□□□ 1.27
TRAF3IP1-202ENST00000391993 DHX57Q6P158 1386 aaKnown RBP23.01■■□□□ 1.27
TRAF3IP1-202ENST00000391993 MROH2BQ7Z745 1585 aa22.97■■□□□ 1.27
TRAF3IP1-202ENST00000391993 GOLGA3Q08378 1498 aa22.96■■□□□ 1.27
TRAF3IP1-202ENST00000391993 ABCC8Q09428 1581 aa22.96■■□□□ 1.27
TRAF3IP1-202ENST00000391993 CCER2I3L3R5 266 aa22.92■■□□□ 1.26
TRAF3IP1-202ENST00000391993 TIMELESSQ9UNS1 1208 aa22.92■■□□□ 1.26
TRAF3IP1-202ENST00000391993 WRNQ14191 1432 aaPredicted RBP eCLIP22.89■■□□□ 1.26
TRAF3IP1-202ENST00000391993 RUSC2Q8N2Y8 1516 aa22.88■■□□□ 1.25
TRAF3IP1-202ENST00000391993 IPO9Q96P70 1041 aaKnown RBP22.87■■□□□ 1.25
TRAF3IP1-202ENST00000391993 CHIC2Q9UKJ5 165 aa22.86■■□□□ 1.25
TRAF3IP1-202ENST00000391993 ARID3CA6NKF2 412 aa22.84■■□□□ 1.25
TRAF3IP1-202ENST00000391993 ARID4BQ4LE39 1312 aaPredicted RBP22.83■■□□□ 1.24
TRAF3IP1-202ENST00000391993 GLIPR1L2Q4G1C9 344 aa22.82■■□□□ 1.24
TRAF3IP1-202ENST00000391993 TMC1Q8TDI8 760 aa22.79■■□□□ 1.24
TRAF3IP1-202ENST00000391993 ERICH6BQ5W0A0 696 aa22.79■■□□□ 1.24
TRAF3IP1-202ENST00000391993 SLC4A3P48751 1232 aa22.78■■□□□ 1.24
TRAF3IP1-202ENST00000391993 WIZO95785 1651 aa22.77■■□□□ 1.24
TRAF3IP1-202ENST00000391993 BRPF3Q9ULD4 1205 aa22.76■■□□□ 1.23
TRAF3IP1-202ENST00000391993 RAB3GAP2Q9H2M9 1393 aa22.75■■□□□ 1.23
TRAF3IP1-202ENST00000391993 VPS8Q8N3P4 1428 aa22.74■■□□□ 1.23
TRAF3IP1-202ENST00000391993 PPM1GO15355 546 aaPredicted RBP22.73■■□□□ 1.23
TRAF3IP1-202ENST00000391993 EIF4G2P78344 907 aaKnown RBP eCLIP22.73■■□□□ 1.236e-9■■■■■ 37.6
TRAF3IP1-202ENST00000391993 NACADO15069 1562 aa22.73■■□□□ 1.23
TRAF3IP1-202ENST00000391993 CCNB3Q8WWL7 1395 aa22.73■■□□□ 1.23
TRAF3IP1-202ENST00000391993 NAP1L5Q96NT1 182 aaPredicted RBP22.71■■□□□ 1.23
TRAF3IP1-202ENST00000391993 PPP1R15AO75807 674 aaPredicted RBP22.68■■□□□ 1.22
TRAF3IP1-202ENST00000391993 RRP7BPQ9NSQ0 103 aa22.66■■□□□ 1.22
TRAF3IP1-202ENST00000391993 EEA1Q15075 1411 aa22.64■■□□□ 1.21
TRAF3IP1-202ENST00000391993 HSPA5P11021 654 aaKnown RBP22.62■■□□□ 1.21
TRAF3IP1-202ENST00000391993 CEP164Q9UPV0 1460 aa22.62■■□□□ 1.21
TRAF3IP1-202ENST00000391993 RGS3P49796 1198 aa22.61■■□□□ 1.21
TRAF3IP1-202ENST00000391993 VSIG10Q8N0Z9 540 aa22.59■■□□□ 1.21
TRAF3IP1-202ENST00000391993 CCDC184Q52MB2 194 aa22.57■■□□□ 1.2
TRAF3IP1-202ENST00000391993 BAZ1AQ9NRL2 1556 aaPredicted RBP22.54■■□□□ 1.2
TRAF3IP1-202ENST00000391993 DDRGK1Q96HY6 314 aa22.53■■□□□ 1.2
TRAF3IP1-202ENST00000391993 FOXD1Q16676 465 aa22.5■■□□□ 1.19
TRAF3IP1-202ENST00000391993 GSE1Q14687 1217 aa22.5■■□□□ 1.19
TRAF3IP1-202ENST00000391993 SETD5Q9C0A6 1442 aa22.48■■□□□ 1.19
TRAF3IP1-202ENST00000391993 PDE4AP27815 886 aa22.47■■□□□ 1.19
TRAF3IP1-202ENST00000391993 CANXP27824 592 aaKnown RBP22.47■■□□□ 1.19
TRAF3IP1-202ENST00000391993 SPRYD3Q8NCJ5 442 aa22.45■■□□□ 1.18
TRAF3IP1-202ENST00000391993 GZF1Q9H116 711 aaPredicted RBP22.44■■□□□ 1.18
TRAF3IP1-202ENST00000391993 KDM2AQ9Y2K7 1162 aa22.44■■□□□ 1.18
TRAF3IP1-202ENST00000391993 EXOC6Q8TAG9 804 aa22.43■■□□□ 1.18
TRAF3IP1-202ENST00000391993 SLKQ9H2G2 1235 aaPredicted RBP22.43■■□□□ 1.18
TRAF3IP1-202ENST00000391993 ARID3AQ99856 593 aa22.42■■□□□ 1.18
TRAF3IP1-202ENST00000391993 RAPGEF2Q9Y4G8 1499 aa22.41■■□□□ 1.18
TRAF3IP1-202ENST00000391993 PKNOX2Q96KN3 472 aa22.41■■□□□ 1.18
TRAF3IP1-202ENST00000391993 FRAT1Q92837 279 aaPredicted RBP22.4■■□□□ 1.18
TRAF3IP1-202ENST00000391993 SLC4A1APQ9BWU0 796 aaKnown RBP22.4■■□□□ 1.18
TRAF3IP1-202ENST00000391993 PLIN1O60240 522 aa22.39■■□□□ 1.17
TRAF3IP1-202ENST00000391993 SKAP1Q86WV1 359 aa22.38■■□□□ 1.17
TRAF3IP1-202ENST00000391993 NUDCQ9Y266 331 aa22.38■■□□□ 1.17
TRAF3IP1-202ENST00000391993 PRKRIP1Q9H875 184 aaPredicted RBP22.37■■□□□ 1.17
TRAF3IP1-202ENST00000391993 NFKBIBQ15653 356 aa22.35■■□□□ 1.17
TRAF3IP1-202ENST00000391993 TCERG1O14776 1098 aaKnown RBP22.34■■□□□ 1.17
TRAF3IP1-202ENST00000391993 USP35Q9P2H5 1018 aa22.32■■□□□ 1.16
TRAF3IP1-202ENST00000391993 AKNAQ7Z591 1439 aa22.31■■□□□ 1.16
TRAF3IP1-202ENST00000391993 UBE2Q2Q8WVN8 375 aa22.31■■□□□ 1.16
TRAF3IP1-202ENST00000391993 PNNQ9H307 717 aaKnown RBP22.3■■□□□ 1.16
TRAF3IP1-202ENST00000391993 RCAN3Q9UKA8 241 aa22.29■■□□□ 1.16
TRAF3IP1-202ENST00000391993 ZBED9Q6R2W3 1325 aa22.29■■□□□ 1.16
TRAF3IP1-202ENST00000391993 RSPH6AQ9H0K4 717 aa22.28■■□□□ 1.16
TRAF3IP1-202ENST00000391993 ZNF777Q9ULD5 760 aaPredicted RBP22.27■■□□□ 1.16
TRAF3IP1-202ENST00000391993 HSP90AA1P07900 732 aaKnown RBP22.27■■□□□ 1.16
TRAF3IP1-202ENST00000391993 TRIM44Q96DX7 344 aaPredicted RBP22.26■■□□□ 1.15
TRAF3IP1-202ENST00000391993 WDR97A6NE52 1622 aa22.26■■□□□ 1.15
TRAF3IP1-202ENST00000391993 UPF2Q9HAU5 1272 aaKnown RBP22.26■■□□□ 1.15
TRAF3IP1-202ENST00000391993 MTUS2Q5JR59 1369 aa22.25■■□□□ 1.15
TRAF3IP1-202ENST00000391993 HSP90AA2PQ14568 343 aaPredicted RBP22.25■■□□□ 1.15
TRAF3IP1-202ENST00000391993 WASHC2AQ641Q2 1341 aa22.25■■□□□ 1.15
TRAF3IP1-202ENST00000391993 TOP2AP11388 1531 aaKnown RBP22.24■■□□□ 1.15
TRAF3IP1-202ENST00000391993 FRAT2O75474 233 aaPredicted RBP22.24■■□□□ 1.15
TRAF3IP1-202ENST00000391993 L3MBTL2Q969R5 705 aa22.22■■□□□ 1.15
TRAF3IP1-202ENST00000391993 BECN1Q14457 450 aa22.18■■□□□ 1.14
TRAF3IP1-202ENST00000391993 ZBTB7CA1YPR0 619 aa22.17■■□□□ 1.14
TRAF3IP1-202ENST00000391993 CC2D1BQ5T0F9 858 aaKnown RBP22.17■■□□□ 1.14
TRAF3IP1-202ENST00000391993 SMARCA4P51532 1647 aa22.15■■□□□ 1.14
TRAF3IP1-202ENST00000391993 ANP32BQ92688 251 aaKnown RBP22.14■■□□□ 1.14
TRAF3IP1-202ENST00000391993 RRP1P56182 461 aaKnown RBP22.12■■□□□ 1.13
TRAF3IP1-202ENST00000391993 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.12■■□□□ 1.13
TRAF3IP1-202ENST00000391993 SMARCA2P51531 1590 aa22.12■■□□□ 1.13
TRAF3IP1-202ENST00000391993 A0A0U1RQG5 324 aaPredicted RBP22.1■■□□□ 1.13
TRAF3IP1-202ENST00000391993 CRBNQ96SW2 442 aa22.09■■□□□ 1.13
TRAF3IP1-202ENST00000391993 AMER1Q5JTC6 1135 aaPredicted RBP22.08■■□□□ 1.13
TRAF3IP1-202ENST00000391993 CARD11Q9BXL7 1154 aa22.08■■□□□ 1.13
TRAF3IP1-202ENST00000391993 WDR43Q15061 677 aaKnown RBP eCLIP22.08■■□□□ 1.12
TRAF3IP1-202ENST00000391993 KIF21BO75037 1637 aa22.06■■□□□ 1.12
TRAF3IP1-202ENST00000391993 BACH2Q9BYV9 841 aa22.06■■□□□ 1.12
TRAF3IP1-202ENST00000391993 L1TD1Q5T7N2 865 aaKnown RBP22.05■■□□□ 1.12
TRAF3IP1-202ENST00000391993 RGL3Q3MIN7 710 aa22.04■■□□□ 1.12
TRAF3IP1-202ENST00000391993 NEUROD2Q15784 382 aa22.03■■□□□ 1.12
TRAF3IP1-202ENST00000391993 NCLP19338 710 aaKnown RBP22.03■■□□□ 1.12
TRAF3IP1-202ENST00000391993 CDCA7LQ96GN5 454 aa22.02■■□□□ 1.11
TRAF3IP1-202ENST00000391993 C11orf95C9JLR9 678 aaPredicted RBP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms