RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 NISCHQ9Y2I1 1504 aa29.3■■■□□ 2.28
TRAF3IP1-202ENST00000391993 SUPT5HO00267 1087 aaKnown RBP28.48■■■□□ 2.15
TRAF3IP1-202ENST00000391993 PCGF6Q9BYE7 350 aa28.27■■■□□ 2.12
TRAF3IP1-202ENST00000391993 SHROOM4Q9ULL8 1493 aa28.1■■■□□ 2.09
TRAF3IP1-202ENST00000391993 PPARGC1BQ86YN6 1023 aaKnown RBP27.98■■■□□ 2.07
TRAF3IP1-202ENST00000391993 HRCP23327 699 aa27.88■■■□□ 2.05
TRAF3IP1-202ENST00000391993 DCAF8L2P0C7V8 631 aa27.61■■■□□ 2.01
TRAF3IP1-202ENST00000391993 PELP1Q8IZL8 1130 aaKnown RBP27.57■■■□□ 2
TRAF3IP1-202ENST00000391993 EHMT2Q96KQ7 1210 aa27.38■■□□□ 1.97
TRAF3IP1-202ENST00000391993 LOC105371045A0A1W2PR82 267 aa26.83■■□□□ 1.89
TRAF3IP1-202ENST00000391993 FAM9AQ8IZU1 332 aaPredicted RBP26.74■■□□□ 1.87
TRAF3IP1-202ENST00000391993 CHIC1Q5VXU3 224 aa26.67■■□□□ 1.86
TRAF3IP1-202ENST00000391993 TTBK1Q5TCY1 1321 aaPredicted RBP26.62■■□□□ 1.85
TRAF3IP1-202ENST00000391993 MYT1Q01538 1121 aa26.6■■□□□ 1.85
TRAF3IP1-202ENST00000391993 YTHDC1Q96MU7 727 aaKnown RBP26.59■■□□□ 1.85
TRAF3IP1-202ENST00000391993 SCAF1Q9H7N4 1312 aaKnown RBP26.57■■□□□ 1.84
TRAF3IP1-202ENST00000391993 TRIM26Q12899 539 aaPredicted RBP26.55■■□□□ 1.84
TRAF3IP1-202ENST00000391993 CENPBP07199 599 aaPredicted RBP26.53■■□□□ 1.84
TRAF3IP1-202ENST00000391993 ZEB1P37275 1124 aaPredicted RBP26.51■■□□□ 1.83
TRAF3IP1-202ENST00000391993 CCER1Q8TC90 406 aaPredicted RBP26.36■■□□□ 1.81
TRAF3IP1-202ENST00000391993 GTF3C3Q9Y5Q9 886 aa26.36■■□□□ 1.81
TRAF3IP1-202ENST00000391993 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.06■■□□□ 1.76
TRAF3IP1-202ENST00000391993 ACIN1Q9UKV3 1341 aaKnown RBP26.06■■□□□ 1.76
TRAF3IP1-202ENST00000391993 NEUROD1Q13562 356 aa26.05■■□□□ 1.76
TRAF3IP1-202ENST00000391993 MYO15BQ96JP2 1530 aa25.99■■□□□ 1.75
TRAF3IP1-202ENST00000391993 DIEXFQ68CQ4 756 aaKnown RBP25.94■■□□□ 1.74
TRAF3IP1-202ENST00000391993 TRIM41Q8WV44 630 aa25.88■■□□□ 1.73
TRAF3IP1-202ENST00000391993 RANGAP1P46060 587 aaPredicted RBP25.34■■□□□ 1.65
TRAF3IP1-202ENST00000391993 DCAF1Q9Y4B6 1507 aa25.34■■□□□ 1.65
TRAF3IP1-202ENST00000391993 BCANQ96GW7 911 aa25.33■■□□□ 1.64
TRAF3IP1-202ENST00000391993 ERICH6Q7L0X2 663 aa25.31■■□□□ 1.64
TRAF3IP1-202ENST00000391993 HNRNPUL2Q1KMD3 747 aaKnown RBP25.23■■□□□ 1.63
TRAF3IP1-202ENST00000391993 ZNF316A6NFI3 1004 aaPredicted RBP25.09■■□□□ 1.61
TRAF3IP1-202ENST00000391993 APLP2Q06481 763 aa25.06■■□□□ 1.6
TRAF3IP1-202ENST00000391993 UBTFP17480 764 aaKnown RBP25.06■■□□□ 1.6
TRAF3IP1-202ENST00000391993 MIER1Q8N108 512 aa25.02■■□□□ 1.6
TRAF3IP1-202ENST00000391993 BCL11AQ9H165 835 aa24.98■■□□□ 1.59
TRAF3IP1-202ENST00000391993 NEFLP07196 543 aa24.98■■□□□ 1.59
TRAF3IP1-202ENST00000391993 ANP32EQ9BTT0 268 aa24.75■■□□□ 1.55
TRAF3IP1-202ENST00000391993 CCDC180Q9P1Z9 1646 aa24.75■■□□□ 1.55
TRAF3IP1-202ENST00000391993 ITGAEP38570 1179 aa24.67■■□□□ 1.54
TRAF3IP1-202ENST00000391993 ZCCHC6Q5VYS8 1495 aaKnown RBP24.61■■□□□ 1.53
TRAF3IP1-202ENST00000391993 CSRNP3Q8WYN3 585 aa24.61■■□□□ 1.53
TRAF3IP1-202ENST00000391993 FKBP8Q14318 412 aa24.59■■□□□ 1.53
TRAF3IP1-202ENST00000391993 SUPT16HQ9Y5B9 1047 aaKnown RBP24.51■■□□□ 1.51
TRAF3IP1-202ENST00000391993 TSHZ2Q9NRE2 1034 aa24.37■■□□□ 1.49
TRAF3IP1-202ENST00000391993 CNGB1Q14028 1251 aaPredicted RBP24.36■■□□□ 1.49
TRAF3IP1-202ENST00000391993 TRIM52Q96A61 297 aa24.28■■□□□ 1.48
TRAF3IP1-202ENST00000391993 IRX6P78412 446 aaPredicted RBP24.23■■□□□ 1.47
TRAF3IP1-202ENST00000391993 NBR1Q14596 966 aa24.23■■□□□ 1.47
TRAF3IP1-202ENST00000391993 ATP1B4Q9UN42 357 aaPredicted RBP24.21■■□□□ 1.47
TRAF3IP1-202ENST00000391993 CDK11AQ9UQ88 783 aaPredicted RBP24.18■■□□□ 1.46
TRAF3IP1-202ENST00000391993 RTL5Q5HYW3 569 aaPredicted RBP24.14■■□□□ 1.46
TRAF3IP1-202ENST00000391993 DDX10Q13206 875 aaKnown RBP24.13■■□□□ 1.45
TRAF3IP1-202ENST00000391993 HIRIP3Q9BW71 556 aaPredicted RBP24.08■■□□□ 1.45
TRAF3IP1-202ENST00000391993 RBM19Q9Y4C8 960 aaKnown RBP24.07■■□□□ 1.44
TRAF3IP1-202ENST00000391993 CLSPNQ9HAW4 1339 aa24.04■■□□□ 1.44
TRAF3IP1-202ENST00000391993 RTN4Q9NQC3 1192 aaKnown RBP24.01■■□□□ 1.43
TRAF3IP1-202ENST00000391993 EIF5BO60841 1220 aaKnown RBP24■■□□□ 1.43
TRAF3IP1-202ENST00000391993 KCNH8Q96L42 1107 aa23.96■■□□□ 1.43
TRAF3IP1-202ENST00000391993 ANP32CO43423 234 aa23.92■■□□□ 1.42
TRAF3IP1-202ENST00000391993 POLR3GLQ9BT43 218 aa23.89■■□□□ 1.42
TRAF3IP1-202ENST00000391993 HNRNPUQ00839 825 aaKnown RBP eCLIP23.83■■□□□ 1.41
TRAF3IP1-202ENST00000391993 NPM2Q86SE8 214 aaKnown RBP23.82■■□□□ 1.4
TRAF3IP1-202ENST00000391993 DEKP35659 375 aaKnown RBP23.81■■□□□ 1.4
TRAF3IP1-202ENST00000391993 PRKCSHP14314 528 aaPredicted RBP23.79■■□□□ 1.4
TRAF3IP1-202ENST00000391993 ABCC9O60706 1549 aa23.76■■□□□ 1.39
TRAF3IP1-202ENST00000391993 CCDC136Q96JN2 1154 aa23.75■■□□□ 1.39
TRAF3IP1-202ENST00000391993 SCRIBQ14160 1630 aa23.72■■□□□ 1.39
TRAF3IP1-202ENST00000391993 SENP3-EIF4A1A0A087X0R7 540 aa23.71■■□□□ 1.39
TRAF3IP1-202ENST00000391993 FAM50AQ14320 339 aaKnown RBP23.71■■□□□ 1.39
TRAF3IP1-202ENST00000391993 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.7■■□□□ 1.38
TRAF3IP1-202ENST00000391993 CEP162Q5TB80 1403 aa23.65■■□□□ 1.38
TRAF3IP1-202ENST00000391993 DAXXQ9UER7 740 aaPredicted RBP23.62■■□□□ 1.37
TRAF3IP1-202ENST00000391993 ANP32AP39687 249 aaKnown RBP23.61■■□□□ 1.37
TRAF3IP1-202ENST00000391993 ANO8Q9HCE9 1232 aaPredicted RBP23.58■■□□□ 1.37
TRAF3IP1-202ENST00000391993 FAM9BQ8IZU0 186 aa23.57■■□□□ 1.36
TRAF3IP1-202ENST00000391993 RSF1Q96T23 1441 aaPredicted RBP23.56■■□□□ 1.36
TRAF3IP1-202ENST00000391993 B4GALNT3Q6L9W6 998 aa23.53■■□□□ 1.36
TRAF3IP1-202ENST00000391993 ZBTB47Q9UFB7 747 aaPredicted RBP23.5■■□□□ 1.35
TRAF3IP1-202ENST00000391993 MYT1LQ9UL68 1186 aa23.47■■□□□ 1.35
TRAF3IP1-202ENST00000391993 SIN3AQ96ST3 1273 aa23.42■■□□□ 1.34
TRAF3IP1-202ENST00000391993 LAS1LQ9Y4W2 734 aaKnown RBP23.41■■□□□ 1.34
TRAF3IP1-202ENST00000391993 NOP58Q9Y2X3 529 aaKnown RBP23.4■■□□□ 1.34
TRAF3IP1-202ENST00000391993 MSH5O43196 834 aa23.37■■□□□ 1.33
TRAF3IP1-202ENST00000391993 SALL2Q9Y467 1007 aaPredicted RBP23.32■■□□□ 1.32
TRAF3IP1-202ENST00000391993 ARXQ96QS3 562 aa23.31■■□□□ 1.32
TRAF3IP1-202ENST00000391993 PABPN1Q86U42 306 aaKnown RBP eCLIP23.3■■□□□ 1.32
TRAF3IP1-202ENST00000391993 RB1CC1Q8TDY2 1594 aa23.29■■□□□ 1.32
TRAF3IP1-202ENST00000391993 P3H3Q8IVL6 736 aa23.25■■□□□ 1.31
TRAF3IP1-202ENST00000391993 SOGA1O94964 1423 aa23.24■■□□□ 1.31
TRAF3IP1-202ENST00000391993 CLIP1P30622 1438 aa23.24■■□□□ 1.31
TRAF3IP1-202ENST00000391993 CECR2Q9BXF3 1484 aa23.23■■□□□ 1.31
TRAF3IP1-202ENST00000391993 NEFMP07197 916 aa23.21■■□□□ 1.31
TRAF3IP1-202ENST00000391993 MRS2Q9HD23 443 aa23.21■■□□□ 1.31
TRAF3IP1-202ENST00000391993 TNIKQ9UKE5 1360 aa23.2■■□□□ 1.31
TRAF3IP1-202ENST00000391993 PPP4R2Q9NY27 417 aa23.19■■□□□ 1.3
TRAF3IP1-202ENST00000391993 ZNF326Q5BKZ1 582 aaKnown RBP23.19■■□□□ 1.3
TRAF3IP1-202ENST00000391993 IL27Q8NEV9 243 aa23.16■■□□□ 1.3
TRAF3IP1-202ENST00000391993 TONSLQ96HA7 1378 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms