RNA–Protein interactions for RNA: ENST00000390945.1

RNU6-278P-201, Transcript of RNA, U6 small nuclear 278, pseudogene, humanhuman

BASIC

Gene RNU6-278P, Length 109 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-278P-201ENST00000390945 FAM212AQ96EL1 285 aa8.53□□□□□ -1.04
RNU6-278P-201ENST00000390945 CHADLQ6NUI6 762 aa8.52□□□□□ -1.05
RNU6-278P-201ENST00000390945 FARP1Q9Y4F1 1045 aaPredicted RBP8.52□□□□□ -1.05
RNU6-278P-201ENST00000390945 SGIP1Q9BQI5 828 aa8.51□□□□□ -1.05
RNU6-278P-201ENST00000390945 HS6ST3Q8IZP7 471 aa8.49□□□□□ -1.05
RNU6-278P-201ENST00000390945 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.49□□□□□ -1.05
RNU6-278P-201ENST00000390945 RIOK3O14730 519 aaKnown RBP8.48□□□□□ -1.05
RNU6-278P-201ENST00000390945 CHGAP10645 457 aaKnown RBP8.48□□□□□ -1.05
RNU6-278P-201ENST00000390945 PRKAR2AP13861 404 aaKnown RBP8.46□□□□□ -1.06
RNU6-278P-201ENST00000390945 CHRDL2Q6WN34 429 aa8.45□□□□□ -1.06
RNU6-278P-201ENST00000390945 PAXIP1Q6ZW49 1069 aaPredicted RBP8.45□□□□□ -1.06
RNU6-278P-201ENST00000390945 VSIG10Q8N0Z9 540 aa8.45□□□□□ -1.06
RNU6-278P-201ENST00000390945 SPRYD3Q8NCJ5 442 aa8.45□□□□□ -1.06
RNU6-278P-201ENST00000390945 HAP1P54257 671 aaPredicted RBP8.43□□□□□ -1.06
RNU6-278P-201ENST00000390945 PIP4P2Q8N4L2 257 aa8.43□□□□□ -1.06
RNU6-278P-201ENST00000390945 TAOK2Q9UL54 1235 aa8.43□□□□□ -1.06
RNU6-278P-201ENST00000390945 VGFO15240 615 aaPredicted RBP8.42□□□□□ -1.06
RNU6-278P-201ENST00000390945 PYGBP11216 843 aa8.42□□□□□ -1.06
RNU6-278P-201ENST00000390945 NKX1-1Q15270 411 aaPredicted RBP8.42□□□□□ -1.06
RNU6-278P-201ENST00000390945 CCDC61Q9Y6R9 512 aa8.41□□□□□ -1.06
RNU6-278P-201ENST00000390945 KDM2AQ9Y2K7 1162 aa8.4□□□□□ -1.06
RNU6-278P-201ENST00000390945 CFAP44Q96MT7 982 aa8.39□□□□□ -1.07
RNU6-278P-201ENST00000390945 TSPYL2Q9H2G4 693 aaPredicted RBP8.39□□□□□ -1.07
RNU6-278P-201ENST00000390945 GTPBP6O43824 516 aaPredicted RBP8.37□□□□□ -1.07
RNU6-278P-201ENST00000390945 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.36□□□□□ -1.07
RNU6-278P-201ENST00000390945 ZFP91Q96JP5 570 aaPredicted RBP8.36□□□□□ -1.07
RNU6-278P-201ENST00000390945 TSHZ2Q9NRE2 1034 aa8.36□□□□□ -1.07
RNU6-278P-201ENST00000390945 STK25O00506 426 aa8.34□□□□□ -1.07
RNU6-278P-201ENST00000390945 ZNF467Q7Z7K2 595 aaPredicted RBP8.33□□□□□ -1.08
RNU6-278P-201ENST00000390945 ZNF579Q8NAF0 562 aaKnown RBP8.32□□□□□ -1.08
RNU6-278P-201ENST00000390945 BCL11BQ9C0K0 894 aaPredicted RBP8.32□□□□□ -1.08
RNU6-278P-201ENST00000390945 KIF12Q96FN5 646 aa8.31□□□□□ -1.08
RNU6-278P-201ENST00000390945 PDAP1Q13442 181 aaKnown RBP8.29□□□□□ -1.08
RNU6-278P-201ENST00000390945 PCDHB8Q9UN66 801 aa8.29□□□□□ -1.08
RNU6-278P-201ENST00000390945 PCDHB13Q9Y5F0 798 aa8.29□□□□□ -1.08
RNU6-278P-201ENST00000390945 STK24Q9Y6E0 443 aa8.29□□□□□ -1.08
RNU6-278P-201ENST00000390945 MAP3K13O43283 966 aa8.27□□□□□ -1.09
RNU6-278P-201ENST00000390945 IFNL1Q8IU54 200 aa8.26□□□□□ -1.09
RNU6-278P-201ENST00000390945 PAK3O75914 559 aaPredicted RBP8.25□□□□□ -1.09
RNU6-278P-201ENST00000390945 PSEN1P49768 467 aa8.25□□□□□ -1.09
RNU6-278P-201ENST00000390945 C19orf67A6NJJ6 358 aa8.24□□□□□ -1.09
RNU6-278P-201ENST00000390945 CD44P16070 742 aaKnown RBP8.22□□□□□ -1.09
RNU6-278P-201ENST00000390945 RYDENQ9NUL5 291 aaKnown RBP8.22□□□□□ -1.09
RNU6-278P-201ENST00000390945 ZRANB1Q9UGI0 708 aa8.22□□□□□ -1.09
RNU6-278P-201ENST00000390945 BCANQ96GW7 911 aa8.19□□□□□ -1.1
RNU6-278P-201ENST00000390945 MFRPQ9BY79 579 aa8.19□□□□□ -1.1
RNU6-278P-201ENST00000390945 PHF12Q96QT6 1004 aa8.17□□□□□ -1.1
RNU6-278P-201ENST00000390945 SOX12O15370 315 aa8.16□□□□□ -1.1
RNU6-278P-201ENST00000390945 FBXO22Q8NEZ5 403 aa8.16□□□□□ -1.1
RNU6-278P-201ENST00000390945 EFCAB3Q8N7B9 438 aa8.14□□□□□ -1.11
RNU6-278P-201ENST00000390945 TRPC6Q9Y210 931 aa8.12□□□□□ -1.11
RNU6-278P-201ENST00000390945 PPP1R37O75864 691 aa8.11□□□□□ -1.11
RNU6-278P-201ENST00000390945 EVX2Q03828 476 aa8.1□□□□□ -1.11
RNU6-278P-201ENST00000390945 CADPS2Q86UW7 1296 aa8.1□□□□□ -1.11
RNU6-278P-201ENST00000390945 MS4A3Q96HJ5 214 aa8.1□□□□□ -1.11
RNU6-278P-201ENST00000390945 CABP2Q9NPB3 220 aa8.1□□□□□ -1.11
RNU6-278P-201ENST00000390945 NLRP6P59044 892 aa8.09□□□□□ -1.11
RNU6-278P-201ENST00000390945 ILDR1Q86SU0 546 aaPredicted RBP8.09□□□□□ -1.11
RNU6-278P-201ENST00000390945 PHF8Q9UPP1 1060 aa8.09□□□□□ -1.11
RNU6-278P-201ENST00000390945 TIE1P35590 1138 aa8.07□□□□□ -1.12
RNU6-278P-201ENST00000390945 CLCN6P51797 869 aa8.07□□□□□ -1.12
RNU6-278P-201ENST00000390945 POTEHQ6S545 545 aa8.07□□□□□ -1.12
RNU6-278P-201ENST00000390945 MS4A4AQ96JQ5 239 aa8.07□□□□□ -1.12
RNU6-278P-201ENST00000390945 TMEM106CQ9BVX2 250 aa8.06□□□□□ -1.12
RNU6-278P-201ENST00000390945 TTLL13PA6NNM8 815 aa8.03□□□□□ -1.12
RNU6-278P-201ENST00000390945 GALR2O43603 387 aaPredicted RBP8.02□□□□□ -1.13
RNU6-278P-201ENST00000390945 BMP2KQ9NSY1 1161 aaPredicted RBP8.02□□□□□ -1.13
RNU6-278P-201ENST00000390945 HAX1O00165 279 aa8.01□□□□□ -1.13
RNU6-278P-201ENST00000390945 PRKCSHP14314 528 aaPredicted RBP7.98□□□□□ -1.13
RNU6-278P-201ENST00000390945 MKRN3Q13064 507 aaKnown RBP7.96□□□□□ -1.14
RNU6-278P-201ENST00000390945 NCKAP5LQ9HCH0 1330 aa7.96□□□□□ -1.14
RNU6-278P-201ENST00000390945 ASTLQ6HA08 431 aaPredicted RBP7.95□□□□□ -1.14
RNU6-278P-201ENST00000390945 ATMINO43313 823 aaPredicted RBP7.94□□□□□ -1.14
RNU6-278P-201ENST00000390945 MFSD10Q14728 455 aa7.94□□□□□ -1.14
RNU6-278P-201ENST00000390945 CRISPLD2Q9H0B8 497 aa7.94□□□□□ -1.14
RNU6-278P-201ENST00000390945 WDR70Q9NW82 654 aa7.94□□□□□ -1.14
RNU6-278P-201ENST00000390945 TRIM35Q9UPQ4 493 aa7.94□□□□□ -1.14
RNU6-278P-201ENST00000390945 PDE4AP27815 886 aa7.93□□□□□ -1.14
RNU6-278P-201ENST00000390945 ATN1P54259 1190 aaPredicted RBP7.93□□□□□ -1.14
RNU6-278P-201ENST00000390945 GOLGA2Q08379 1002 aa7.93□□□□□ -1.14
RNU6-278P-201ENST00000390945 NBR1Q14596 966 aa7.93□□□□□ -1.14
RNU6-278P-201ENST00000390945 P3H3Q8IVL6 736 aa7.93□□□□□ -1.14
RNU6-278P-201ENST00000390945 KCNV2Q8TDN2 545 aa7.93□□□□□ -1.14
RNU6-278P-201ENST00000390945 GABBR2O75899 941 aa7.92□□□□□ -1.14
RNU6-278P-201ENST00000390945 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.92□□□□□ -1.14
RNU6-278P-201ENST00000390945 IRX5P78411 483 aaPredicted RBP7.91□□□□□ -1.14
RNU6-278P-201ENST00000390945 DPY19L2Q6NUT2 758 aa7.91□□□□□ -1.14
RNU6-278P-201ENST00000390945 PDCD7Q8N8D1 485 aaKnown RBP7.91□□□□□ -1.14
RNU6-278P-201ENST00000390945 TPRNQ4KMQ1 711 aa7.9□□□□□ -1.14
RNU6-278P-201ENST00000390945 ARHGEF1Q92888 912 aaKnown RBP7.9□□□□□ -1.14
RNU6-278P-201ENST00000390945 ARIH1Q9Y4X5 557 aaPredicted RBP7.9□□□□□ -1.14
RNU6-278P-201ENST00000390945 CAMK2BQ13554 666 aa7.89□□□□□ -1.15
RNU6-278P-201ENST00000390945 E2F4Q16254 413 aa7.89□□□□□ -1.15
RNU6-278P-201ENST00000390945 IER5LQ5T953 404 aa7.89□□□□□ -1.15
RNU6-278P-201ENST00000390945 TMEM121BQ9BXQ6 578 aaPredicted RBP7.89□□□□□ -1.15
RNU6-278P-201ENST00000390945 LARP6Q9BRS8 491 aaKnown RBP7.88□□□□□ -1.15
RNU6-278P-201ENST00000390945 OCEL1Q9H607 264 aa7.87□□□□□ -1.15
RNU6-278P-201ENST00000390945 GPHNQ9NQX3 736 aaPredicted RBP7.87□□□□□ -1.15
RNU6-278P-201ENST00000390945 PELP1Q8IZL8 1130 aaKnown RBP7.86□□□□□ -1.15
RNU6-278P-201ENST00000390945 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms