RNA–Protein interactions for RNA: ENST00000390945.1

RNU6-278P-201, Transcript of RNA, U6 small nuclear 278, pseudogene, humanhuman

BASIC

Gene RNU6-278P, Length 109 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-278P-201ENST00000390945 AEBP2Q6ZN18 517 aaPredicted RBP16.03■□□□□ 0.16
RNU6-278P-201ENST00000390945 CHIC1Q5VXU3 224 aa15.91■□□□□ 0.14
RNU6-278P-201ENST00000390945 PHF23Q9BUL5 403 aaPredicted RBP14.08□□□□□ -0.16
RNU6-278P-201ENST00000390945 SENP3Q9H4L4 574 aaPredicted RBP13.48□□□□□ -0.25
RNU6-278P-201ENST00000390945 PLPPR3Q6T4P5 718 aa13□□□□□ -0.33
RNU6-278P-201ENST00000390945 FOXD1Q16676 465 aa12.53□□□□□ -0.4
RNU6-278P-201ENST00000390945 PPP6R1Q9UPN7 881 aa12.32□□□□□ -0.44
RNU6-278P-201ENST00000390945 ADRA2BP18089 450 aa12.26□□□□□ -0.45
RNU6-278P-201ENST00000390945 PIAS4Q8N2W9 510 aaPredicted RBP11.77□□□□□ -0.53
RNU6-278P-201ENST00000390945 KCNA4P22459 653 aa11.56□□□□□ -0.56
RNU6-278P-201ENST00000390945 PPP4R3CPQ6ZMV5 832 aa11.51□□□□□ -0.57
RNU6-278P-201ENST00000390945 MSH5O43196 834 aa11.37□□□□□ -0.59
RNU6-278P-201ENST00000390945 NCBP3Q53F19 620 aaKnown RBP11.23□□□□□ -0.61
RNU6-278P-201ENST00000390945 SCAF1Q9H7N4 1312 aaKnown RBP11.17□□□□□ -0.62
RNU6-278P-201ENST00000390945 NPM3O75607 178 aaKnown RBP11.13□□□□□ -0.63
RNU6-278P-201ENST00000390945 CNKSR2Q8WXI2 1034 aa11.12□□□□□ -0.63
RNU6-278P-201ENST00000390945 MAPK8IP2Q13387 824 aaPredicted RBP11.06□□□□□ -0.64
RNU6-278P-201ENST00000390945 SLC4A1APQ9BWU0 796 aaKnown RBP11.01□□□□□ -0.65
RNU6-278P-201ENST00000390945 EHMT2Q96KQ7 1210 aa10.94□□□□□ -0.66
RNU6-278P-201ENST00000390945 DNAJC5BQ9UF47 199 aa10.93□□□□□ -0.66
RNU6-278P-201ENST00000390945 CSRNP3Q8WYN3 585 aa10.87□□□□□ -0.67
RNU6-278P-201ENST00000390945 RNF216Q9NWF9 866 aaPredicted RBP10.85□□□□□ -0.67
RNU6-278P-201ENST00000390945 DMRT2Q9Y5R5 561 aa10.84□□□□□ -0.67
RNU6-278P-201ENST00000390945 HOXD11P31277 338 aaPredicted RBP10.78□□□□□ -0.68
RNU6-278P-201ENST00000390945 ZBTB22O15209 634 aa10.68□□□□□ -0.7
RNU6-278P-201ENST00000390945 FOXD4L1Q9NU39 408 aa10.53□□□□□ -0.72
RNU6-278P-201ENST00000390945 SLC4A2P04920 1241 aa10.5□□□□□ -0.73
RNU6-278P-201ENST00000390945 MYCNP04198 464 aaPredicted RBP10.23□□□□□ -0.77
RNU6-278P-201ENST00000390945 ATXN8OSP0DMR3 200 aa10.2□□□□□ -0.78
RNU6-278P-201ENST00000390945 DCAF8L1A6NGE4 600 aa10.17□□□□□ -0.78
RNU6-278P-201ENST00000390945 POTEDQ86YR6 584 aa10.14□□□□□ -0.79
RNU6-278P-201ENST00000390945 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.12□□□□□ -0.79
RNU6-278P-201ENST00000390945 U3KPZ7 1027 aaPredicted RBP10.08□□□□□ -0.8
RNU6-278P-201ENST00000390945 ATF5Q9Y2D1 282 aaPredicted RBP10□□□□□ -0.81
RNU6-278P-201ENST00000390945 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.99□□□□□ -0.81
RNU6-278P-201ENST00000390945 HNRNPUL2Q1KMD3 747 aaKnown RBP9.99□□□□□ -0.81
RNU6-278P-201ENST00000390945 SAMD1Q6SPF0 538 aaPredicted RBP9.97□□□□□ -0.81
RNU6-278P-201ENST00000390945 RNF39Q9H2S5 420 aa9.83□□□□□ -0.84
RNU6-278P-201ENST00000390945 ZNF219Q9P2Y4 722 aaPredicted RBP9.78□□□□□ -0.84
RNU6-278P-201ENST00000390945 APLP2Q06481 763 aa9.77□□□□□ -0.85
RNU6-278P-201ENST00000390945 C1QBPQ07021 282 aaKnown RBP9.72□□□□□ -0.85
RNU6-278P-201ENST00000390945 SPINK5Q9NQ38 1064 aaPredicted RBP9.69□□□□□ -0.86
RNU6-278P-201ENST00000390945 FKBP8Q14318 412 aa9.68□□□□□ -0.86
RNU6-278P-201ENST00000390945 MKRN4PQ13434 485 aaPredicted RBP9.6□□□□□ -0.87
RNU6-278P-201ENST00000390945 TRHP20396 242 aaPredicted RBP9.58□□□□□ -0.88
RNU6-278P-201ENST00000390945 POLA2Q14181 598 aa9.57□□□□□ -0.88
RNU6-278P-201ENST00000390945 CAPN15O75808 1086 aa9.55□□□□□ -0.88
RNU6-278P-201ENST00000390945 PROM2Q8N271 834 aa9.46□□□□□ -0.9
RNU6-278P-201ENST00000390945 DSG3P32926 999 aa9.45□□□□□ -0.9
RNU6-278P-201ENST00000390945 FBLN2P98095 1184 aa9.44□□□□□ -0.9
RNU6-278P-201ENST00000390945 SPDYE4A6NLX3 237 aa9.43□□□□□ -0.9
RNU6-278P-201ENST00000390945 ABCB7O75027 752 aa9.4□□□□□ -0.9
RNU6-278P-201ENST00000390945 CACNB1Q02641 598 aaPredicted RBP9.38□□□□□ -0.91
RNU6-278P-201ENST00000390945 ZBTB12Q9Y330 459 aaPredicted RBP9.38□□□□□ -0.91
RNU6-278P-201ENST00000390945 RTN4Q9NQC3 1192 aaKnown RBP9.35□□□□□ -0.91
RNU6-278P-201ENST00000390945 AMER1Q5JTC6 1135 aaPredicted RBP9.34□□□□□ -0.91
RNU6-278P-201ENST00000390945 FBXO3Q9UK99 471 aa9.28□□□□□ -0.92
RNU6-278P-201ENST00000390945 SPDYE2BA6NHP3 402 aa9.2□□□□□ -0.94
RNU6-278P-201ENST00000390945 SPDYE6P0CI01 402 aa9.2□□□□□ -0.94
RNU6-278P-201ENST00000390945 SPDYE2Q495Y8 402 aa9.2□□□□□ -0.94
RNU6-278P-201ENST00000390945 SSUH2Q9Y2M2 353 aa9.2□□□□□ -0.94
RNU6-278P-201ENST00000390945 ZNF692Q9BU19 519 aaPredicted RBP9.18□□□□□ -0.94
RNU6-278P-201ENST00000390945 OSCARQ8IYS5 282 aa9.17□□□□□ -0.94
RNU6-278P-201ENST00000390945 VASPP50552 380 aaPredicted RBP9.15□□□□□ -0.94
RNU6-278P-201ENST00000390945 IFNLR1Q8IU57 520 aaPredicted RBP9.12□□□□□ -0.95
RNU6-278P-201ENST00000390945 PABPN1Q86U42 306 aaKnown RBP eCLIP9.07□□□□□ -0.96
RNU6-278P-201ENST00000390945 STAG3Q9UJ98 1225 aa9.06□□□□□ -0.96
RNU6-278P-201ENST00000390945 PKD2Q13563 968 aa8.93□□□□□ -0.98
RNU6-278P-201ENST00000390945 AKT1S1Q96B36 256 aa8.92□□□□□ -0.98
RNU6-278P-201ENST00000390945 RBM42Q9BTD8 480 aaKnown RBP8.91□□□□□ -0.98
RNU6-278P-201ENST00000390945 MIER1Q8N108 512 aa8.9□□□□□ -0.98
RNU6-278P-201ENST00000390945 SPOCK2Q92563 424 aa8.9□□□□□ -0.98
RNU6-278P-201ENST00000390945 SLC24A1O60721 1099 aa8.86□□□□□ -0.99
RNU6-278P-201ENST00000390945 KLHL34Q8N239 644 aa8.86□□□□□ -0.99
RNU6-278P-201ENST00000390945 PLCD3Q8N3E9 789 aa8.86□□□□□ -0.99
RNU6-278P-201ENST00000390945 REM2Q8IYK8 340 aaPredicted RBP8.84□□□□□ -0.99
RNU6-278P-201ENST00000390945 SPDYE1Q8NFV5 336 aaPredicted RBP8.83□□□□□ -1
RNU6-278P-201ENST00000390945 ZBTB47Q9UFB7 747 aaPredicted RBP8.78□□□□□ -1
RNU6-278P-201ENST00000390945 MNX1P50219 401 aaPredicted RBP8.76□□□□□ -1.01
RNU6-278P-201ENST00000390945 CREBZFQ9NS37 354 aa8.76□□□□□ -1.01
RNU6-278P-201ENST00000390945 PLEKHG5O94827 1062 aa8.74□□□□□ -1.01
RNU6-278P-201ENST00000390945 NUBP1P53384 320 aa8.74□□□□□ -1.01
RNU6-278P-201ENST00000390945 PRR29P0C7W0 189 aa8.73□□□□□ -1.01
RNU6-278P-201ENST00000390945 ECM2O94769 699 aaPredicted RBP8.72□□□□□ -1.01
RNU6-278P-201ENST00000390945 CLEC11AQ9Y240 323 aa8.71□□□□□ -1.02
RNU6-278P-201ENST00000390945 PITPNM1O00562 1244 aa8.7□□□□□ -1.02
RNU6-278P-201ENST00000390945 RGL2O15211 777 aa8.68□□□□□ -1.02
RNU6-278P-201ENST00000390945 NPM1P06748 294 aaKnown RBP eCLIP8.66□□□□□ -1.02
RNU6-278P-201ENST00000390945 PLCB2Q00722 1185 aa8.66□□□□□ -1.02
RNU6-278P-201ENST00000390945 TRIM41Q8WV44 630 aa8.65□□□□□ -1.02
RNU6-278P-201ENST00000390945 GSE1Q14687 1217 aa8.64□□□□□ -1.03
RNU6-278P-201ENST00000390945 CIZ1Q9ULV3 898 aaPredicted RBP8.64□□□□□ -1.03
RNU6-278P-201ENST00000390945 CHRM1P11229 460 aaPredicted RBP8.61□□□□□ -1.03
RNU6-278P-201ENST00000390945 BBXQ8WY36 941 aaPredicted RBP8.61□□□□□ -1.03
RNU6-278P-201ENST00000390945 RASEFQ8IZ41 740 aa8.58□□□□□ -1.04
RNU6-278P-201ENST00000390945 RNF25Q96BH1 459 aaPredicted RBP8.58□□□□□ -1.04
RNU6-278P-201ENST00000390945 DCAF8L2P0C7V8 631 aa8.57□□□□□ -1.04
RNU6-278P-201ENST00000390945 DCAF8Q5TAQ9 597 aa8.57□□□□□ -1.04
RNU6-278P-201ENST00000390945 FXR2P51116 673 aaKnown RBP eCLIP8.56□□□□□ -1.04
RNU6-278P-201ENST00000390945 DNAJC5Q9H3Z4 198 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms