RNA–Protein interactions for RNA: ENST00000383698.3

VGLL3-201, Transcript of vestigial like family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VGLL3, Length 2,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3-201ENST00000383698 POLA1P09884 1462 aaPredicted RBP31.6■■■□□ 2.65
VGLL3-201ENST00000383698 ATP1B4Q9UN42 357 aaPredicted RBP31.55■■■□□ 2.64
VGLL3-201ENST00000383698 ABCA10Q8WWZ4 1543 aa31.54■■■□□ 2.64
VGLL3-201ENST00000383698 LRRC9Q6ZRR7 1453 aa31.53■■■□□ 2.64
VGLL3-201ENST00000383698 MAP3K1Q13233 1512 aa31.52■■■□□ 2.64
VGLL3-201ENST00000383698 PCF11O94913 1555 aaKnown RBP31.51■■■□□ 2.63
VGLL3-201ENST00000383698 FHAD1B1AJZ9 1412 aa31.49■■■□□ 2.63
VGLL3-201ENST00000383698 FHOD3Q2V2M9 1422 aa31.49■■■□□ 2.63
VGLL3-201ENST00000383698 PHLDB1Q86UU1 1377 aa31.47■■■□□ 2.63
VGLL3-201ENST00000383698 RAB3GAP2Q9H2M9 1393 aa31.45■■■□□ 2.63
VGLL3-201ENST00000383698 FAM50AQ14320 339 aaKnown RBP31.41■■■□□ 2.62
VGLL3-201ENST00000383698 CFAP43Q8NDM7 1665 aa31.41■■■□□ 2.62
VGLL3-201ENST00000383698 URB2Q14146 1524 aaKnown RBP31.38■■■□□ 2.61
VGLL3-201ENST00000383698 CUL7Q14999 1698 aa31.37■■■□□ 2.61
VGLL3-201ENST00000383698 LAMC3Q9Y6N6 1575 aa31.32■■■□□ 2.6
VGLL3-201ENST00000383698 CTTNBP2Q8WZ74 1663 aa31.32■■■□□ 2.6
VGLL3-201ENST00000383698 EFCAB5A4FU69 1503 aa31.31■■■□□ 2.6
VGLL3-201ENST00000383698 TDRD9Q8NDG6 1382 aaKnown RBP31.31■■■□□ 2.6
VGLL3-201ENST00000383698 DNAJC5BQ9UF47 199 aa31.31■■■□□ 2.6
VGLL3-201ENST00000383698 SETD5Q9C0A6 1442 aa31.3■■■□□ 2.6
VGLL3-201ENST00000383698 FYCO1Q9BQS8 1478 aa31.29■■■□□ 2.6
VGLL3-201ENST00000383698 MAPKBP1O60336 1514 aa31.29■■■□□ 2.6
VGLL3-201ENST00000383698 WDR97A6NE52 1622 aa31.27■■■□□ 2.6
VGLL3-201ENST00000383698 CASKIN1Q8WXD9 1431 aa31.26■■■□□ 2.59
VGLL3-201ENST00000383698 PELP1Q8IZL8 1130 aaKnown RBP31.25■■■□□ 2.59
VGLL3-201ENST00000383698 AQRO60306 1485 aaKnown RBP eCLIP31.18■■■□□ 2.58
VGLL3-201ENST00000383698 ABCA5Q8WWZ7 1642 aa31.18■■■□□ 2.58
VGLL3-201ENST00000383698 GAPVD1Q14C86 1478 aa31.17■■■□□ 2.58
VGLL3-201ENST00000383698 FMN1Q68DA7 1419 aa31.15■■■□□ 2.58
VGLL3-201ENST00000383698 PDS5BQ9NTI5 1447 aa31.14■■■□□ 2.58
VGLL3-201ENST00000383698 SNAPC4Q5SXM2 1469 aa31.12■■■□□ 2.57
VGLL3-201ENST00000383698 SIN3AQ96ST3 1273 aa31.12■■■□□ 2.57
VGLL3-201ENST00000383698 KIF21AQ7Z4S6 1674 aa31.11■■■□□ 2.57
VGLL3-201ENST00000383698 MTUS2Q5JR59 1369 aa31.05■■■□□ 2.56
VGLL3-201ENST00000383698 SAMD9Q5K651 1589 aa31.05■■■□□ 2.56
VGLL3-201ENST00000383698 FGD6Q6ZV73 1430 aa31.02■■■□□ 2.56
VGLL3-201ENST00000383698 LRRIQ1Q96JM4 1722 aa31.01■■■□□ 2.55
VGLL3-201ENST00000383698 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.97■■■□□ 2.55
VGLL3-201ENST00000383698 TARBP1Q13395 1621 aaKnown RBP30.95■■■□□ 2.54
VGLL3-201ENST00000383698 GRIN2BQ13224 1484 aa30.94■■■□□ 2.54
VGLL3-201ENST00000383698 NCOA2Q15596 1464 aa30.89■■■□□ 2.54
VGLL3-201ENST00000383698 PTPRKQ15262 1439 aa30.89■■■□□ 2.54
VGLL3-201ENST00000383698 CCDC18Q5T9S5 1454 aa30.84■■■□□ 2.53
VGLL3-201ENST00000383698 MYOM3Q5VTT5 1437 aa30.83■■■□□ 2.53
VGLL3-201ENST00000383698 PBRM1Q86U86 1689 aa30.82■■■□□ 2.52
VGLL3-201ENST00000383698 SUPT6HQ7KZ85 1726 aaKnown RBP30.8■■■□□ 2.52
VGLL3-201ENST00000383698 THOC2Q8NI27 1593 aaKnown RBP30.8■■■□□ 2.52
VGLL3-201ENST00000383698 EHBP1L1Q8N3D4 1523 aa30.79■■■□□ 2.52
VGLL3-201ENST00000383698 HIRIP3Q9BW71 556 aaPredicted RBP30.79■■■□□ 2.52
VGLL3-201ENST00000383698 MAGI3Q5TCQ9 1506 aa30.78■■■□□ 2.52
VGLL3-201ENST00000383698 HFM1A2PYH4 1435 aa30.78■■■□□ 2.52
VGLL3-201ENST00000383698 KCNH8Q96L42 1107 aa30.78■■■□□ 2.52
VGLL3-201ENST00000383698 DDX10Q13206 875 aaKnown RBP30.77■■■□□ 2.52
VGLL3-201ENST00000383698 PTPN23Q9H3S7 1636 aa30.77■■■□□ 2.52
VGLL3-201ENST00000383698 TIMELESSQ9UNS1 1208 aa30.74■■■□□ 2.51
VGLL3-201ENST00000383698 PPP1R15AO75807 674 aaPredicted RBP30.74■■■□□ 2.51
VGLL3-201ENST00000383698 ARID3CA6NKF2 412 aa30.73■■■□□ 2.51
VGLL3-201ENST00000383698 IQGAP2Q13576 1575 aa30.71■■■□□ 2.51
VGLL3-201ENST00000383698 UGGT2Q9NYU1 1516 aa30.71■■■□□ 2.51
VGLL3-201ENST00000383698 NAIPQ13075 1403 aa30.71■■■□□ 2.51
VGLL3-201ENST00000383698 ADAMTS12P58397 1594 aa30.71■■■□□ 2.51
VGLL3-201ENST00000383698 UACAQ9BZF9 1416 aa30.7■■■□□ 2.5
VGLL3-201ENST00000383698 MRC2Q9UBG0 1479 aa30.69■■■□□ 2.5
VGLL3-201ENST00000383698 TONSLQ96HA7 1378 aa30.68■■■□□ 2.5
VGLL3-201ENST00000383698 HECW1Q76N89 1606 aa30.66■■■□□ 2.5
VGLL3-201ENST00000383698 CHIC2Q9UKJ5 165 aa30.66■■■□□ 2.5
VGLL3-201ENST00000383698 ARHGEF11O15085 1522 aa30.65■■■□□ 2.5
VGLL3-201ENST00000383698 RRP7BPQ9NSQ0 103 aa30.64■■■□□ 2.5
VGLL3-201ENST00000383698 CDK13Q14004 1512 aaKnown RBP30.64■■■□□ 2.49
VGLL3-201ENST00000383698 EPRSP07814 1512 aaKnown RBP30.62■■■□□ 2.49
VGLL3-201ENST00000383698 ZNF608Q9ULD9 1512 aaPredicted RBP30.61■■■□□ 2.49
VGLL3-201ENST00000383698 WDR62O43379 1518 aa30.54■■■□□ 2.48
VGLL3-201ENST00000383698 TCOF1Q13428 1488 aaKnown RBP30.53■■■□□ 2.48
VGLL3-201ENST00000383698 SUPT16HQ9Y5B9 1047 aaKnown RBP30.52■■■□□ 2.48
VGLL3-201ENST00000383698 IFT140Q96RY7 1462 aa30.49■■■□□ 2.47
VGLL3-201ENST00000383698 TRIM52Q96A61 297 aa30.48■■■□□ 2.47
VGLL3-201ENST00000383698 KDM6BO15054 1643 aa30.46■■■□□ 2.47
VGLL3-201ENST00000383698 GCC2Q8IWJ2 1684 aa30.45■■■□□ 2.46
VGLL3-201ENST00000383698 KDM5BQ9UGL1 1544 aa30.4■■■□□ 2.46
VGLL3-201ENST00000383698 MIA2Q96PC5 1412 aa30.4■■■□□ 2.46
VGLL3-201ENST00000383698 DENND4BO75064 1496 aaPredicted RBP30.4■■■□□ 2.46
VGLL3-201ENST00000383698 DISP1Q96F81 1524 aa30.39■■■□□ 2.46
VGLL3-201ENST00000383698 KIAA0556O60303 1618 aa30.39■■■□□ 2.46
VGLL3-201ENST00000383698 ANP32CO43423 234 aa30.38■■■□□ 2.45
VGLL3-201ENST00000383698 KIAA0586Q9BVV6 1533 aa30.38■■■□□ 2.45
VGLL3-201ENST00000383698 EIF4G3O43432 1585 aaKnown RBP30.35■■■□□ 2.45
VGLL3-201ENST00000383698 AKNAQ7Z591 1439 aa30.33■■■□□ 2.45
VGLL3-201ENST00000383698 GRIN2AQ12879 1464 aa30.33■■■□□ 2.45
VGLL3-201ENST00000383698 FOXD1Q16676 465 aa30.33■■■□□ 2.45
VGLL3-201ENST00000383698 NUP153P49790 1475 aaKnown RBP30.32■■■□□ 2.44
VGLL3-201ENST00000383698 ZNF644Q9H582 1327 aaPredicted RBP30.31■■■□□ 2.44
VGLL3-201ENST00000383698 MPHOSPH9Q99550 1183 aa30.31■■■□□ 2.44
VGLL3-201ENST00000383698 RAPGEF6Q8TEU7 1601 aa30.27■■■□□ 2.44
VGLL3-201ENST00000383698 CCER2I3L3R5 266 aa30.27■■■□□ 2.44
VGLL3-201ENST00000383698 DAPK1P53355 1430 aa30.26■■■□□ 2.44
VGLL3-201ENST00000383698 ERCC6Q03468 1493 aa30.24■■■□□ 2.43
VGLL3-201ENST00000383698 FBLN2P98095 1184 aa30.22■■■□□ 2.43
VGLL3-201ENST00000383698 ABCC5O15440 1437 aa30.21■■■□□ 2.43
VGLL3-201ENST00000383698 HSPA5P11021 654 aaKnown RBP30.2■■■□□ 2.43
VGLL3-201ENST00000383698 CHMP7Q8WUX9 453 aaPredicted RBP30.2■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms