RNA–Protein interactions for RNA: ENST00000382381.7

ABCA3-202, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCA3, Length 6,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-202ENST00000382381 TPRNQ4KMQ1 711 aa17.36■□□□□ 0.37
ABCA3-202ENST00000382381 TMC1Q8TDI8 760 aa17.35■□□□□ 0.37
ABCA3-202ENST00000382381 ARID4BQ4LE39 1312 aaPredicted RBP17.34■□□□□ 0.37
ABCA3-202ENST00000382381 C14orf37Q86TY3 774 aa17.3■□□□□ 0.36
ABCA3-202ENST00000382381 TULP1O00294 542 aaPredicted RBP17.29■□□□□ 0.36
ABCA3-202ENST00000382381 RSF1Q96T23 1441 aaPredicted RBP17.29■□□□□ 0.36
ABCA3-202ENST00000382381 WDR43Q15061 677 aaKnown RBP eCLIP17.26■□□□□ 0.35
ABCA3-202ENST00000382381 MRS2Q9HD23 443 aa17.26■□□□□ 0.35
ABCA3-202ENST00000382381 TAOK2Q9UL54 1235 aa17.25■□□□□ 0.35
ABCA3-202ENST00000382381 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.25■□□□□ 0.35
ABCA3-202ENST00000382381 TSPY4P0CV99 314 aa17.23■□□□□ 0.35
ABCA3-202ENST00000382381 TSPY10P0CW01 314 aa17.23■□□□□ 0.35
ABCA3-202ENST00000382381 CECR2Q9BXF3 1484 aa17.23■□□□□ 0.35
ABCA3-202ENST00000382381 MTUS2Q5JR59 1369 aa17.21■□□□□ 0.35
ABCA3-202ENST00000382381 PLEKHD1A6NEE1 506 aa17.19■□□□□ 0.34
ABCA3-202ENST00000382381 CDK11BP21127 795 aaKnown RBP17.15■□□□□ 0.34
ABCA3-202ENST00000382381 MIER1Q8N108 512 aa17.14■□□□□ 0.33
ABCA3-202ENST00000382381 PPM1GO15355 546 aaPredicted RBP17.13■□□□□ 0.33
ABCA3-202ENST00000382381 WRNQ14191 1432 aaPredicted RBP eCLIP17.13■□□□□ 0.33
ABCA3-202ENST00000382381 RRP7BPQ9NSQ0 103 aa17.13■□□□□ 0.33
ABCA3-202ENST00000382381 NCLP19338 710 aaKnown RBP17.12■□□□□ 0.33
ABCA3-202ENST00000382381 RGL3Q3MIN7 710 aa17.12■□□□□ 0.33
ABCA3-202ENST00000382381 MYH16Q9H6N6 1097 aa17.1■□□□□ 0.33
ABCA3-202ENST00000382381 PPP1R15AO75807 674 aaPredicted RBP17.1■□□□□ 0.33
ABCA3-202ENST00000382381 GLIPR1L2Q4G1C9 344 aa17.08■□□□□ 0.33
ABCA3-202ENST00000382381 NEUROD2Q15784 382 aa17.08■□□□□ 0.32
ABCA3-202ENST00000382381 MLECQ14165 292 aa17.07■□□□□ 0.32
ABCA3-202ENST00000382381 BAZ1AQ9NRL2 1556 aaPredicted RBP17.07■□□□□ 0.32
ABCA3-202ENST00000382381 EIF4G1Q04637 1599 aaKnown RBP17.07■□□□□ 0.32
ABCA3-202ENST00000382381 CLIP1P30622 1438 aa17.04■□□□□ 0.32
ABCA3-202ENST00000382381 RTN4Q9NQC3 1192 aaKnown RBP17.04■□□□□ 0.32
ABCA3-202ENST00000382381 KIF27Q86VH2 1401 aa17.03■□□□□ 0.32
ABCA3-202ENST00000382381 HAP1P54257 671 aaPredicted RBP17.03■□□□□ 0.32
ABCA3-202ENST00000382381 LAS1LQ9Y4W2 734 aaKnown RBP17.03■□□□□ 0.32
ABCA3-202ENST00000382381 LMOD2Q6P5Q4 547 aa17.01■□□□□ 0.31
ABCA3-202ENST00000382381 DCAF1Q9Y4B6 1507 aa17■□□□□ 0.31
ABCA3-202ENST00000382381 CFDP1Q9UEE9 299 aaPredicted RBP17■□□□□ 0.31
ABCA3-202ENST00000382381 TNNT2P45379 298 aaPredicted RBP16.99■□□□□ 0.31
ABCA3-202ENST00000382381 TRIM44Q96DX7 344 aaPredicted RBP16.98■□□□□ 0.31
ABCA3-202ENST00000382381 NCBP3Q53F19 620 aaKnown RBP16.98■□□□□ 0.31
ABCA3-202ENST00000382381 PLCB2Q00722 1185 aa16.96■□□□□ 0.31
ABCA3-202ENST00000382381 CUX2O14529 1486 aa16.95■□□□□ 0.3
ABCA3-202ENST00000382381 PTMAP06454 111 aaKnown RBP16.94■□□□□ 0.3
ABCA3-202ENST00000382381 TDRD9Q8NDG6 1382 aaKnown RBP16.94■□□□□ 0.3
ABCA3-202ENST00000382381 PDS5BQ9NTI5 1447 aa16.94■□□□□ 0.3
ABCA3-202ENST00000382381 DNTTIP2Q5QJE6 756 aaKnown RBP16.93■□□□□ 0.3
ABCA3-202ENST00000382381 RGS3P49796 1198 aa16.92■□□□□ 0.3
ABCA3-202ENST00000382381 SUPT16HQ9Y5B9 1047 aaKnown RBP16.92■□□□□ 0.3
ABCA3-202ENST00000382381 MROH2BQ7Z745 1585 aa16.92■□□□□ 0.3
ABCA3-202ENST00000382381 EIF4G2P78344 907 aaKnown RBP eCLIP16.91■□□□□ 0.3
ABCA3-202ENST00000382381 GOLGA3Q08378 1498 aa16.89■□□□□ 0.29
ABCA3-202ENST00000382381 FRAT1Q92837 279 aaPredicted RBP16.89■□□□□ 0.29
ABCA3-202ENST00000382381 SOX12O15370 315 aa16.88■□□□□ 0.29
ABCA3-202ENST00000382381 BECN1Q14457 450 aa16.88■□□□□ 0.29
ABCA3-202ENST00000382381 ZRSR1Q15695 479 aaKnown RBP16.88■□□□□ 0.29
ABCA3-202ENST00000382381 NPHP1O15259 732 aa16.87■□□□□ 0.29
ABCA3-202ENST00000382381 FTSJ3Q8IY81 847 aaKnown RBP16.87■□□□□ 0.29
ABCA3-202ENST00000382381 NAP1L2Q9ULW6 460 aaPredicted RBP16.86■□□□□ 0.29
ABCA3-202ENST00000382381 CARMIL1Q5VZK9 1371 aa16.86■□□□□ 0.29
ABCA3-202ENST00000382381 CCDC88BA6NC98 1476 aa16.84■□□□□ 0.29
ABCA3-202ENST00000382381 AMER1Q5JTC6 1135 aaPredicted RBP16.84■□□□□ 0.29
ABCA3-202ENST00000382381 SOGA1O94964 1423 aa16.84■□□□□ 0.29
ABCA3-202ENST00000382381 GOLGA6L22H0YM25 854 aa16.84■□□□□ 0.29
ABCA3-202ENST00000382381 SMARCA2P51531 1590 aa16.84■□□□□ 0.29
ABCA3-202ENST00000382381 CEP162Q5TB80 1403 aa16.82■□□□□ 0.28
ABCA3-202ENST00000382381 SPRYD3Q8NCJ5 442 aa16.81■□□□□ 0.28
ABCA3-202ENST00000382381 CC2D1BQ5T0F9 858 aaKnown RBP16.8■□□□□ 0.28
ABCA3-202ENST00000382381 KNSTRNQ9Y448 316 aa16.8■□□□□ 0.28
ABCA3-202ENST00000382381 NAP1L5Q96NT1 182 aaPredicted RBP16.79■□□□□ 0.28
ABCA3-202ENST00000382381 CYB5RLQ6IPT4 315 aa16.78■□□□□ 0.28
ABCA3-202ENST00000382381 DDRGK1Q96HY6 314 aa16.78■□□□□ 0.28
ABCA3-202ENST00000382381 ABCC8Q09428 1581 aa16.78■□□□□ 0.28
ABCA3-202ENST00000382381 U2SURPO15042 1029 aaKnown RBP16.77■□□□□ 0.28
ABCA3-202ENST00000382381 GGT6Q6P531 493 aa16.77■□□□□ 0.28
ABCA3-202ENST00000382381 CFAP53Q96M91 514 aa16.76■□□□□ 0.27
ABCA3-202ENST00000382381 OS9Q13438 667 aaPredicted RBP16.76■□□□□ 0.27
ABCA3-202ENST00000382381 FGD1P98174 961 aa16.76■□□□□ 0.27
ABCA3-202ENST00000382381 CARD11Q9BXL7 1154 aa16.76■□□□□ 0.27
ABCA3-202ENST00000382381 EEA1Q15075 1411 aa16.74■□□□□ 0.27
ABCA3-202ENST00000382381 WIZO95785 1651 aa16.74■□□□□ 0.27
ABCA3-202ENST00000382381 CEP164Q9UPV0 1460 aa16.74■□□□□ 0.27
ABCA3-202ENST00000382381 B4GALNT3Q6L9W6 998 aa16.73■□□□□ 0.27
ABCA3-202ENST00000382381 SIN3AQ96ST3 1273 aa16.73■□□□□ 0.27
ABCA3-202ENST00000382381 CCNB3Q8WWL7 1395 aa16.73■□□□□ 0.27
ABCA3-202ENST00000382381 CASC1Q6TDU7 716 aa16.73■□□□□ 0.27
ABCA3-202ENST00000382381 SAFB2Q14151 953 aaKnown RBP eCLIP16.73■□□□□ 0.27
ABCA3-202ENST00000382381 MAPK8IP3Q9UPT6 1336 aa16.73■□□□□ 0.27
ABCA3-202ENST00000382381 MYO15BQ96JP2 1530 aa16.73■□□□□ 0.27
ABCA3-202ENST00000382381 POGKQ9P215 609 aa16.72■□□□□ 0.27
ABCA3-202ENST00000382381 KCNJ4P48050 445 aa16.72■□□□□ 0.27
ABCA3-202ENST00000382381 CLSTN1O94985 981 aa16.71■□□□□ 0.27
ABCA3-202ENST00000382381 CADPSQ9ULU8 1353 aa16.71■□□□□ 0.27
ABCA3-202ENST00000382381 APBB1O00213 710 aa16.7■□□□□ 0.26
ABCA3-202ENST00000382381 ISY1Q9ULR0 285 aaKnown RBP16.69■□□□□ 0.26
ABCA3-202ENST00000382381 HSP90AB1P08238 724 aaKnown RBP16.68■□□□□ 0.26
ABCA3-202ENST00000382381 CARMIL2Q6F5E8 1435 aa16.67■□□□□ 0.26
ABCA3-202ENST00000382381 ARID3AQ99856 593 aa16.66■□□□□ 0.26
ABCA3-202ENST00000382381 GOLGA2Q08379 1002 aa16.65■□□□□ 0.26
ABCA3-202ENST00000382381 ATAD2BQ9ULI0 1458 aa16.63■□□□□ 0.25
ABCA3-202ENST00000382381 ERICH6BQ5W0A0 696 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms