RNA–Protein interactions for RNA: ENST00000382203.5

SMARCA2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCA2, Length 5,867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-209ENST00000382203 CHGAP10645 457 aaKnown RBP16.19■□□□□ 0.18
SMARCA2-209ENST00000382203 ARID3CA6NKF2 412 aa16.18■□□□□ 0.18
SMARCA2-209ENST00000382203 FAM9BQ8IZU0 186 aa16.17■□□□□ 0.18
SMARCA2-209ENST00000382203 TPRNQ4KMQ1 711 aa16.16■□□□□ 0.18
SMARCA2-209ENST00000382203 PABPN1Q86U42 306 aaKnown RBP eCLIP16.16■□□□□ 0.18
SMARCA2-209ENST00000382203 L1TD1Q5T7N2 865 aaKnown RBP16.16■□□□□ 0.18
SMARCA2-209ENST00000382203 PNNQ9H307 717 aaKnown RBP16.16■□□□□ 0.18
SMARCA2-209ENST00000382203 NOP58Q9Y2X3 529 aaKnown RBP16.15■□□□□ 0.18
SMARCA2-209ENST00000382203 IRX6P78412 446 aaPredicted RBP16.14■□□□□ 0.17
SMARCA2-209ENST00000382203 SALL2Q9Y467 1007 aaPredicted RBP16.13■□□□□ 0.17
SMARCA2-209ENST00000382203 P3H3Q8IVL6 736 aa16.13■□□□□ 0.17
SMARCA2-209ENST00000382203 PLPPR3Q6T4P5 718 aa16.13■□□□□ 0.17
SMARCA2-209ENST00000382203 APPP05067 770 aa16.12■□□□□ 0.17
SMARCA2-209ENST00000382203 HSP90AA2PQ14568 343 aaPredicted RBP16.1■□□□□ 0.17
SMARCA2-209ENST00000382203 MYH16Q9H6N6 1097 aa16.09■□□□□ 0.17
SMARCA2-209ENST00000382203 A0A0U1RQG5 324 aaPredicted RBP16.09■□□□□ 0.17
SMARCA2-209ENST00000382203 TONSLQ96HA7 1378 aa16.08■□□□□ 0.17
SMARCA2-209ENST00000382203 SETQ01105 290 aaPredicted RBP16.08■□□□□ 0.16
SMARCA2-209ENST00000382203 WDR43Q15061 677 aaKnown RBP eCLIP16.06■□□□□ 0.16
SMARCA2-209ENST00000382203 TULP1O00294 542 aaPredicted RBP16.05■□□□□ 0.16
SMARCA2-209ENST00000382203 NPM1P06748 294 aaKnown RBP eCLIP16.05■□□□□ 0.16
SMARCA2-209ENST00000382203 GOLGA6L1Q8N7Z2 621 aa16.04■□□□□ 0.16
SMARCA2-209ENST00000382203 NOC3LQ8WTT2 800 aaKnown RBP16.04■□□□□ 0.16
SMARCA2-209ENST00000382203 PODXL2Q9NZ53 605 aa16.04■□□□□ 0.16
SMARCA2-209ENST00000382203 A0A0G2JS52 829 aa15.99■□□□□ 0.15
SMARCA2-209ENST00000382203 DRC7Q8IY82 874 aa15.98■□□□□ 0.15
SMARCA2-209ENST00000382203 ZBTB7CA1YPR0 619 aa15.98■□□□□ 0.15
SMARCA2-209ENST00000382203 KIAA2012Q0VF49 1180 aa15.98■□□□□ 0.15
SMARCA2-209ENST00000382203 TMC1Q8TDI8 760 aa15.97■□□□□ 0.15
SMARCA2-209ENST00000382203 ABCC9O60706 1549 aa15.97■□□□□ 0.15
SMARCA2-209ENST00000382203 DDX10Q13206 875 aaKnown RBP15.96■□□□□ 0.15
SMARCA2-209ENST00000382203 RSPH6AQ9H0K4 717 aa15.94■□□□□ 0.14
SMARCA2-209ENST00000382203 NCBP3Q53F19 620 aaKnown RBP15.92■□□□□ 0.14
SMARCA2-209ENST00000382203 CASC1Q6TDU7 716 aa15.91■□□□□ 0.14
SMARCA2-209ENST00000382203 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.91■□□□□ 0.144e-7■■■■□ 23.1
SMARCA2-209ENST00000382203 HSP90AB1P08238 724 aaKnown RBP15.9■□□□□ 0.14
SMARCA2-209ENST00000382203 GOLGA6L4A6NEF3 574 aa15.89■□□□□ 0.13
SMARCA2-209ENST00000382203 CSRNP3Q8WYN3 585 aa15.89■□□□□ 0.13
SMARCA2-209ENST00000382203 PKNOX2Q96KN3 472 aa15.88■□□□□ 0.13
SMARCA2-209ENST00000382203 MRS2Q9HD23 443 aa15.88■□□□□ 0.13
SMARCA2-209ENST00000382203 USP35Q9P2H5 1018 aa15.86■□□□□ 0.13
SMARCA2-209ENST00000382203 ZNF771Q7L3S4 317 aaPredicted RBP15.84■□□□□ 0.13
SMARCA2-209ENST00000382203 C14orf37Q86TY3 774 aa15.84■□□□□ 0.13
SMARCA2-209ENST00000382203 PATL2C9JE40 543 aaKnown RBP15.81■□□□□ 0.12
SMARCA2-209ENST00000382203 KDM2AQ9Y2K7 1162 aa15.79■□□□□ 0.12
SMARCA2-209ENST00000382203 GOLGA6L3A6NEY3 463 aa15.78■□□□□ 0.12
SMARCA2-209ENST00000382203 PPP1R15AO75807 674 aaPredicted RBP15.78■□□□□ 0.12
SMARCA2-209ENST00000382203 TSPY4P0CV99 314 aa15.77■□□□□ 0.12
SMARCA2-209ENST00000382203 TSPY10P0CW01 314 aa15.77■□□□□ 0.12
SMARCA2-209ENST00000382203 TAF7LQ5H9L4 462 aa15.77■□□□□ 0.12
SMARCA2-209ENST00000382203 MIER1Q8N108 512 aa15.77■□□□□ 0.12
SMARCA2-209ENST00000382203 HAP1P54257 671 aaPredicted RBP15.77■□□□□ 0.11
SMARCA2-209ENST00000382203 HSCBQ8IWL3 235 aa15.77■□□□□ 0.11
SMARCA2-209ENST00000382203 TAOK2Q9UL54 1235 aa15.77■□□□□ 0.11
SMARCA2-209ENST00000382203 CHIC2Q9UKJ5 165 aa15.76■□□□□ 0.11
SMARCA2-209ENST00000382203 STK11IPQ8N1F8 1099 aa15.76■□□□□ 0.11
SMARCA2-209ENST00000382203 RGS3P49796 1198 aa15.76■□□□□ 0.11
SMARCA2-209ENST00000382203 PPP4R2Q9NY27 417 aa15.74■□□□□ 0.11
SMARCA2-209ENST00000382203 PLEKHG5O94827 1062 aa15.73■□□□□ 0.11
SMARCA2-209ENST00000382203 FGD1P98174 961 aa15.73■□□□□ 0.11
SMARCA2-209ENST00000382203 GZF1Q9H116 711 aaPredicted RBP15.73■□□□□ 0.11
SMARCA2-209ENST00000382203 RRP12Q5JTH9 1297 aaKnown RBP15.73■□□□□ 0.11
SMARCA2-209ENST00000382203 CFAP53Q96M91 514 aa15.72■□□□□ 0.11
SMARCA2-209ENST00000382203 SUPT16HQ9Y5B9 1047 aaKnown RBP15.72■□□□□ 0.11
SMARCA2-209ENST00000382203 PRM3Q9NNZ6 103 aa15.71■□□□□ 0.11
SMARCA2-209ENST00000382203 TIMELESSQ9UNS1 1208 aa15.71■□□□□ 0.11
SMARCA2-209ENST00000382203 CLSTN1O94985 981 aa15.71■□□□□ 0.11
SMARCA2-209ENST00000382203 RBM19Q9Y4C8 960 aaKnown RBP15.69■□□□□ 0.1
SMARCA2-209ENST00000382203 GBP4Q96PP9 640 aa15.68■□□□□ 0.1
SMARCA2-209ENST00000382203 MEX3CQ5U5Q3 659 aaKnown RBP15.67■□□□□ 0.1
SMARCA2-209ENST00000382203 SPRYD3Q8NCJ5 442 aa15.67■□□□□ 0.1
SMARCA2-209ENST00000382203 PRKCSHP14314 528 aaPredicted RBP15.67■□□□□ 0.1
SMARCA2-209ENST00000382203 GPS2Q13227 327 aa15.66■□□□□ 0.1
SMARCA2-209ENST00000382203 NOM1Q5C9Z4 860 aaKnown RBP15.66■□□□□ 0.1
SMARCA2-209ENST00000382203 NAP1L2Q9ULW6 460 aaPredicted RBP15.65■□□□□ 0.1
SMARCA2-209ENST00000382203 HTATSF1O43719 755 aaKnown RBP15.65■□□□□ 0.1
SMARCA2-209ENST00000382203 NPHP1O15259 732 aa15.65■□□□□ 0.1
SMARCA2-209ENST00000382203 FTSJ3Q8IY81 847 aaKnown RBP15.64■□□□□ 0.09
SMARCA2-209ENST00000382203 EIF4G2P78344 907 aaKnown RBP eCLIP15.63■□□□□ 0.096e-6■■■■□ 25.1
SMARCA2-209ENST00000382203 TEX35Q5T0J7 233 aa15.63■□□□□ 0.09
SMARCA2-209ENST00000382203 KCNJ4P48050 445 aa15.62■□□□□ 0.09
SMARCA2-209ENST00000382203 SYAP1Q96A49 352 aaPredicted RBP15.62■□□□□ 0.09
SMARCA2-209ENST00000382203 MTUS2Q5JR59 1369 aa15.62■□□□□ 0.09
SMARCA2-209ENST00000382203 PDE4CQ08493 712 aa15.62■□□□□ 0.09
SMARCA2-209ENST00000382203 CDCA8Q53HL2 280 aa15.62■□□□□ 0.09
SMARCA2-209ENST00000382203 CCDC180Q9P1Z9 1646 aa15.6■□□□□ 0.09
SMARCA2-209ENST00000382203 TPM4P67936 248 aa15.59■□□□□ 0.09
SMARCA2-209ENST00000382203 FAM13BQ9NYF5 915 aa15.59■□□□□ 0.09
SMARCA2-209ENST00000382203 CHMP4BQ9H444 224 aaKnown RBP15.58■□□□□ 0.09
SMARCA2-209ENST00000382203 SENP3Q9H4L4 574 aaPredicted RBP15.58■□□□□ 0.08
SMARCA2-209ENST00000382203 MAPK8IP3Q9UPT6 1336 aa15.58■□□□□ 0.08
SMARCA2-209ENST00000382203 TPM3P06753 285 aa15.57■□□□□ 0.08
SMARCA2-209ENST00000382203 B4GALNT3Q6L9W6 998 aa15.56■□□□□ 0.08
SMARCA2-209ENST00000382203 CHMP7Q8WUX9 453 aaPredicted RBP15.56■□□□□ 0.08
SMARCA2-209ENST00000382203 KNSTRNQ9Y448 316 aa15.56■□□□□ 0.08
SMARCA2-209ENST00000382203 OS9Q13438 667 aaPredicted RBP15.56■□□□□ 0.08
SMARCA2-209ENST00000382203 ZCCHC6Q5VYS8 1495 aaKnown RBP15.56■□□□□ 0.08
SMARCA2-209ENST00000382203 GOLGA2Q08379 1002 aa15.55■□□□□ 0.08
SMARCA2-209ENST00000382203 MAP7D2Q96T17 732 aa15.54■□□□□ 0.08
SMARCA2-209ENST00000382203 NEFHP12036 1026 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms