RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 GOLGA3Q08378 1498 aa20.76■□□□□ 0.91
VLDLR-202ENST00000382099 ANP32CO43423 234 aa20.74■□□□□ 0.91
VLDLR-202ENST00000382099 HNRNPUQ00839 825 aaKnown RBP eCLIP20.72■□□□□ 0.91
VLDLR-202ENST00000382099 HIRIP3Q9BW71 556 aaPredicted RBP20.71■□□□□ 0.91
VLDLR-202ENST00000382099 PPP4R2Q9NY27 417 aa20.69■□□□□ 0.9
VLDLR-202ENST00000382099 PODXL2Q9NZ53 605 aa20.69■□□□□ 0.9
VLDLR-202ENST00000382099 BRPF3Q9ULD4 1205 aa20.69■□□□□ 0.9
VLDLR-202ENST00000382099 LAS1LQ9Y4W2 734 aaKnown RBP20.68■□□□□ 0.9
VLDLR-202ENST00000382099 DHX57Q6P158 1386 aaKnown RBP20.67■□□□□ 0.9
VLDLR-202ENST00000382099 NEFMP07197 916 aa20.66■□□□□ 0.9
VLDLR-202ENST00000382099 SYNJ1O43426 1573 aa20.66■□□□□ 0.9
VLDLR-202ENST00000382099 IPO9Q96P70 1041 aaKnown RBP20.65■□□□□ 0.9
VLDLR-202ENST00000382099 NPM2Q86SE8 214 aaKnown RBP20.63■□□□□ 0.89
VLDLR-202ENST00000382099 GLIPR1L2Q4G1C9 344 aa20.61■□□□□ 0.89
VLDLR-202ENST00000382099 VSIG10Q8N0Z9 540 aa20.61■□□□□ 0.89
VLDLR-202ENST00000382099 KIF21BO75037 1637 aa20.6■□□□□ 0.89
VLDLR-202ENST00000382099 BICRAQ9NZM4 1560 aa20.59■□□□□ 0.89
VLDLR-202ENST00000382099 CEP164Q9UPV0 1460 aa20.59■□□□□ 0.89
VLDLR-202ENST00000382099 SLC24A1O60721 1099 aa20.57■□□□□ 0.88
VLDLR-202ENST00000382099 CLIP1P30622 1438 aa20.57■□□□□ 0.88
VLDLR-202ENST00000382099 CCER2I3L3R5 266 aa20.55■□□□□ 0.88
VLDLR-202ENST00000382099 PEG3Q9GZU2 1588 aa20.55■□□□□ 0.88
VLDLR-202ENST00000382099 ZMYND15Q9H091 742 aa20.52■□□□□ 0.88
VLDLR-202ENST00000382099 VPS8Q8N3P4 1428 aa20.51■□□□□ 0.87
VLDLR-202ENST00000382099 RAPGEF2Q9Y4G8 1499 aa20.5■□□□□ 0.87
VLDLR-202ENST00000382099 RSPH6AQ9H0K4 717 aa20.47■□□□□ 0.87
VLDLR-202ENST00000382099 WASHC2AQ641Q2 1341 aa20.45■□□□□ 0.86
VLDLR-202ENST00000382099 PPP1R15AO75807 674 aaPredicted RBP20.44■□□□□ 0.86
VLDLR-202ENST00000382099 BAZ1BQ9UIG0 1483 aaKnown RBP20.43■□□□□ 0.86
VLDLR-202ENST00000382099 C11orf95C9JLR9 678 aaPredicted RBP20.43■□□□□ 0.86
VLDLR-202ENST00000382099 SIN3AQ96ST3 1273 aa20.42■□□□□ 0.86
VLDLR-202ENST00000382099 ATAD2BQ9ULI0 1458 aa20.39■□□□□ 0.85
VLDLR-202ENST00000382099 USP35Q9P2H5 1018 aa20.36■□□□□ 0.85
VLDLR-202ENST00000382099 WASHC2CQ9Y4E1 1318 aa20.36■□□□□ 0.85
VLDLR-202ENST00000382099 GSE1Q14687 1217 aa20.35■□□□□ 0.85
VLDLR-202ENST00000382099 PPM1GO15355 546 aaPredicted RBP20.31■□□□□ 0.84
VLDLR-202ENST00000382099 TOP2BQ02880 1626 aa20.3■□□□□ 0.84
VLDLR-202ENST00000382099 A0A0U1RQG5 324 aaPredicted RBP20.3■□□□□ 0.84
VLDLR-202ENST00000382099 ATP1B4Q9UN42 357 aaPredicted RBP20.29■□□□□ 0.84
VLDLR-202ENST00000382099 FAM9BQ8IZU0 186 aa20.28■□□□□ 0.84
VLDLR-202ENST00000382099 FRAT1Q92837 279 aaPredicted RBP20.27■□□□□ 0.83
VLDLR-202ENST00000382099 ARAP1Q96P48 1450 aa20.26■□□□□ 0.83
VLDLR-202ENST00000382099 DAXXQ9UER7 740 aaPredicted RBP20.25■□□□□ 0.83
VLDLR-202ENST00000382099 KANK4Q5T7N3 995 aaPredicted RBP20.24■□□□□ 0.83
VLDLR-202ENST00000382099 BIVM-ERCC5R4GMW8 1640 aa20.22■□□□□ 0.83
VLDLR-202ENST00000382099 PRXQ9BXM0 1461 aa20.2■□□□□ 0.82
VLDLR-202ENST00000382099 HSP90AA2PQ14568 343 aaPredicted RBP20.19■□□□□ 0.82
VLDLR-202ENST00000382099 NAP1L5Q96NT1 182 aaPredicted RBP20.19■□□□□ 0.82
VLDLR-202ENST00000382099 FAM43AQ8N2R8 423 aa20.18■□□□□ 0.82
VLDLR-202ENST00000382099 P3H3Q8IVL6 736 aa20.18■□□□□ 0.82
VLDLR-202ENST00000382099 ERICH3Q5RHP9 1530 aa20.18■□□□□ 0.82
VLDLR-202ENST00000382099 WDR97A6NE52 1622 aa20.14■□□□□ 0.81
VLDLR-202ENST00000382099 NFKBIBQ15653 356 aa20.14■□□□□ 0.81
VLDLR-202ENST00000382099 SENP3-EIF4A1A0A087X0R7 540 aa20.13■□□□□ 0.81
VLDLR-202ENST00000382099 CNGB1Q14028 1251 aaPredicted RBP20.11■□□□□ 0.81
VLDLR-202ENST00000382099 SLC4A3P48751 1232 aa20.1■□□□□ 0.81
VLDLR-202ENST00000382099 RRBP1Q9P2E9 1410 aaKnown RBP20.1■□□□□ 0.81
VLDLR-202ENST00000382099 CUX1P39880 1505 aa20.08■□□□□ 0.81
VLDLR-202ENST00000382099 HSP90AA1P07900 732 aaKnown RBP20.08■□□□□ 0.8
VLDLR-202ENST00000382099 CCDC184Q52MB2 194 aa20.08■□□□□ 0.8
VLDLR-202ENST00000382099 ARXQ96QS3 562 aa20.07■□□□□ 0.8
VLDLR-202ENST00000382099 MRS2Q9HD23 443 aa20.06■□□□□ 0.8
VLDLR-202ENST00000382099 DCAF11Q8TEB1 546 aa20.06■□□□□ 0.8
VLDLR-202ENST00000382099 ARID4BQ4LE39 1312 aaPredicted RBP20.05■□□□□ 0.8
VLDLR-202ENST00000382099 RAB3GAP2Q9H2M9 1393 aa20.05■□□□□ 0.8
VLDLR-202ENST00000382099 PDE4AP27815 886 aa20.05■□□□□ 0.8
VLDLR-202ENST00000382099 CUX2O14529 1486 aa20.02■□□□□ 0.8
VLDLR-202ENST00000382099 ARHGAP35Q9NRY4 1499 aa20.01■□□□□ 0.79
VLDLR-202ENST00000382099 RBM10P98175 930 aaKnown RBP19.99■□□□□ 0.79
VLDLR-202ENST00000382099 RRAGDQ9NQL2 400 aaPredicted RBP19.99■□□□□ 0.79
VLDLR-202ENST00000382099 AKNAQ7Z591 1439 aa19.99■□□□□ 0.79
VLDLR-202ENST00000382099 CCNB3Q8WWL7 1395 aa19.98■□□□□ 0.79
VLDLR-202ENST00000382099 KIF27Q86VH2 1401 aa19.97■□□□□ 0.79
VLDLR-202ENST00000382099 DDRGK1Q96HY6 314 aa19.97■□□□□ 0.79
VLDLR-202ENST00000382099 PNNQ9H307 717 aaKnown RBP19.97■□□□□ 0.79
VLDLR-202ENST00000382099 RRP9O43818 475 aaKnown RBP19.96■□□□□ 0.79
VLDLR-202ENST00000382099 ZBED9Q6R2W3 1325 aa19.95■□□□□ 0.78
VLDLR-202ENST00000382099 FRAT2O75474 233 aaPredicted RBP19.94■□□□□ 0.78
VLDLR-202ENST00000382099 TCERG1O14776 1098 aaKnown RBP19.93■□□□□ 0.78
VLDLR-202ENST00000382099 MAPKBP1O60336 1514 aa19.92■□□□□ 0.78
VLDLR-202ENST00000382099 BACH2Q9BYV9 841 aa19.9■□□□□ 0.78
VLDLR-202ENST00000382099 TONSLQ96HA7 1378 aa19.9■□□□□ 0.78
VLDLR-202ENST00000382099 HMGXB3Q12766 1538 aa19.9■□□□□ 0.78
VLDLR-202ENST00000382099 FAM50AQ14320 339 aaKnown RBP19.89■□□□□ 0.77
VLDLR-202ENST00000382099 NCAPD3P42695 1498 aa19.89■□□□□ 0.77
VLDLR-202ENST00000382099 ARID3CA6NKF2 412 aa19.87■□□□□ 0.77
VLDLR-202ENST00000382099 CFTRP13569 1480 aa19.86■□□□□ 0.77
VLDLR-202ENST00000382099 PDE4CQ08493 712 aa19.85■□□□□ 0.77
VLDLR-202ENST00000382099 NUDCQ9Y266 331 aa19.83■□□□□ 0.77
VLDLR-202ENST00000382099 AAMPQ13685 434 aa19.83■□□□□ 0.77
VLDLR-202ENST00000382099 TIAM1Q13009 1591 aa19.83■□□□□ 0.76
VLDLR-202ENST00000382099 SKAP1Q86WV1 359 aa19.82■□□□□ 0.76
VLDLR-202ENST00000382099 EXOC6Q8TAG9 804 aa19.8■□□□□ 0.76
VLDLR-202ENST00000382099 FGD1P98174 961 aa19.8■□□□□ 0.76
VLDLR-202ENST00000382099 IGF1RP08069 1367 aa19.8■□□□□ 0.76
VLDLR-202ENST00000382099 SETD5Q9C0A6 1442 aa19.79■□□□□ 0.76
VLDLR-202ENST00000382099 PRKRIP1Q9H875 184 aaPredicted RBP19.77■□□□□ 0.76
VLDLR-202ENST00000382099 PHLDB1Q86UU1 1377 aa19.77■□□□□ 0.76
VLDLR-202ENST00000382099 POGKQ9P215 609 aa19.77■□□□□ 0.75
VLDLR-202ENST00000382099 RGS3P49796 1198 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms