RNA–Protein interactions for RNA: ENST00000381346.8

RDH11-201, Transcript of retinol dehydrogenase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDH11, Length 2,588 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-201ENST00000381346 TOPBP1Q92547 1522 aa13.08□□□□□ -0.32
RDH11-201ENST00000381346 ARAP1Q96P48 1450 aa13.06□□□□□ -0.32
RDH11-201ENST00000381346 POLA1P09884 1462 aaPredicted RBP13.05□□□□□ -0.32
RDH11-201ENST00000381346 ABCA10Q8WWZ4 1543 aa13.04□□□□□ -0.32
RDH11-201ENST00000381346 ANO8Q9HCE9 1232 aaPredicted RBP13.03□□□□□ -0.32
RDH11-201ENST00000381346 CARMIL1Q5VZK9 1371 aa13.03□□□□□ -0.32
RDH11-201ENST00000381346 RANGAP1P46060 587 aaPredicted RBP13.02□□□□□ -0.32
RDH11-201ENST00000381346 PDS5BQ9NTI5 1447 aa13.01□□□□□ -0.33
RDH11-201ENST00000381346 RAD54L2Q9Y4B4 1467 aa13□□□□□ -0.33
RDH11-201ENST00000381346 URB2Q14146 1524 aaKnown RBP13□□□□□ -0.33
RDH11-201ENST00000381346 ARHGAP35Q9NRY4 1499 aa13□□□□□ -0.33
RDH11-201ENST00000381346 MSH5O43196 834 aa12.98□□□□□ -0.33
RDH11-201ENST00000381346 ERICH6BQ5W0A0 696 aa12.97□□□□□ -0.33
RDH11-201ENST00000381346 WDR97A6NE52 1622 aa12.97□□□□□ -0.33
RDH11-201ENST00000381346 CUL7Q14999 1698 aa12.96□□□□□ -0.34
RDH11-201ENST00000381346 KIF21AQ7Z4S6 1674 aa12.95□□□□□ -0.34
RDH11-201ENST00000381346 FANCIQ9NVI1 1328 aa12.95□□□□□ -0.34
RDH11-201ENST00000381346 DEKP35659 375 aaKnown RBP12.95□□□□□ -0.34
RDH11-201ENST00000381346 BCANQ96GW7 911 aa12.94□□□□□ -0.34
RDH11-201ENST00000381346 UBE2Q2Q8WVN8 375 aa12.93□□□□□ -0.34
RDH11-201ENST00000381346 FKBP8Q14318 412 aa12.92□□□□□ -0.34
RDH11-201ENST00000381346 ABCA5Q8WWZ7 1642 aa12.91□□□□□ -0.34
RDH11-201ENST00000381346 ERCC6Q03468 1493 aa12.91□□□□□ -0.34
RDH11-201ENST00000381346 MAP3K1Q13233 1512 aa12.87□□□□□ -0.35
RDH11-201ENST00000381346 NEFLP07196 543 aa12.87□□□□□ -0.35
RDH11-201ENST00000381346 CTTNBP2Q8WZ74 1663 aa12.87□□□□□ -0.35
RDH11-201ENST00000381346 KANK4Q5T7N3 995 aaPredicted RBP12.86□□□□□ -0.35
RDH11-201ENST00000381346 GAPVD1Q14C86 1478 aa12.86□□□□□ -0.35
RDH11-201ENST00000381346 TARBP1Q13395 1621 aaKnown RBP12.86□□□□□ -0.35
RDH11-201ENST00000381346 SALL2Q9Y467 1007 aaPredicted RBP12.85□□□□□ -0.35
RDH11-201ENST00000381346 EFCAB5A4FU69 1503 aa12.85□□□□□ -0.35
RDH11-201ENST00000381346 FHAD1B1AJZ9 1412 aa12.84□□□□□ -0.35
RDH11-201ENST00000381346 TDRD9Q8NDG6 1382 aaKnown RBP12.84□□□□□ -0.35
RDH11-201ENST00000381346 HNRNPUL2Q1KMD3 747 aaKnown RBP12.84□□□□□ -0.35
RDH11-201ENST00000381346 TIAM1Q13009 1591 aa12.83□□□□□ -0.36
RDH11-201ENST00000381346 RRBP1Q9P2E9 1410 aaKnown RBP12.83□□□□□ -0.36
RDH11-201ENST00000381346 MRC2Q9UBG0 1479 aa12.82□□□□□ -0.36
RDH11-201ENST00000381346 PCF11O94913 1555 aaKnown RBP12.79□□□□□ -0.36
RDH11-201ENST00000381346 CFAP43Q8NDM7 1665 aa12.79□□□□□ -0.36
RDH11-201ENST00000381346 AQRO60306 1485 aaKnown RBP eCLIP12.78□□□□□ -0.368e-7■■■■■ 28.7
RDH11-201ENST00000381346 THOC2Q8NI27 1593 aaKnown RBP12.78□□□□□ -0.36
RDH11-201ENST00000381346 FHOD3Q2V2M9 1422 aa12.77□□□□□ -0.36
RDH11-201ENST00000381346 LRRC9Q6ZRR7 1453 aa12.77□□□□□ -0.36
RDH11-201ENST00000381346 FYCO1Q9BQS8 1478 aa12.77□□□□□ -0.36
RDH11-201ENST00000381346 PBRM1Q86U86 1689 aa12.77□□□□□ -0.37
RDH11-201ENST00000381346 CCNB3Q8WWL7 1395 aa12.76□□□□□ -0.37
RDH11-201ENST00000381346 SAMD9Q5K651 1589 aa12.75□□□□□ -0.37
RDH11-201ENST00000381346 CASKIN1Q8WXD9 1431 aa12.75□□□□□ -0.37
RDH11-201ENST00000381346 CDK11AQ9UQ88 783 aaPredicted RBP12.75□□□□□ -0.37
RDH11-201ENST00000381346 WDR62O43379 1518 aa12.75□□□□□ -0.37
RDH11-201ENST00000381346 ITGAEP38570 1179 aa12.75□□□□□ -0.37
RDH11-201ENST00000381346 FMN1Q68DA7 1419 aa12.74□□□□□ -0.37
RDH11-201ENST00000381346 P3H3Q8IVL6 736 aa12.74□□□□□ -0.37
RDH11-201ENST00000381346 CCDC136Q96JN2 1154 aa12.73□□□□□ -0.37
RDH11-201ENST00000381346 IFT140Q96RY7 1462 aa12.72□□□□□ -0.37
RDH11-201ENST00000381346 ADAMTS12P58397 1594 aa12.72□□□□□ -0.37
RDH11-201ENST00000381346 GRIN2BQ13224 1484 aa12.71□□□□□ -0.38
RDH11-201ENST00000381346 SNAPC4Q5SXM2 1469 aa12.7□□□□□ -0.38
RDH11-201ENST00000381346 PHLDB1Q86UU1 1377 aa12.67□□□□□ -0.38
RDH11-201ENST00000381346 KCNH8Q96L42 1107 aa12.66□□□□□ -0.38
RDH11-201ENST00000381346 DHX57Q6P158 1386 aaKnown RBP12.66□□□□□ -0.38
RDH11-201ENST00000381346 ZNF608Q9ULD9 1512 aaPredicted RBP12.66□□□□□ -0.38
RDH11-201ENST00000381346 IQGAP2Q13576 1575 aa12.65□□□□□ -0.38
RDH11-201ENST00000381346 EIF5BO60841 1220 aaKnown RBP12.65□□□□□ -0.38
RDH11-201ENST00000381346 ATP1B4Q9UN42 357 aaPredicted RBP12.65□□□□□ -0.39
RDH11-201ENST00000381346 LRRIQ1Q96JM4 1722 aa12.63□□□□□ -0.39
RDH11-201ENST00000381346 NOP58Q9Y2X3 529 aaKnown RBP12.62□□□□□ -0.39
RDH11-201ENST00000381346 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.62□□□□□ -0.39
RDH11-201ENST00000381346 EIF4G3O43432 1585 aaKnown RBP12.61□□□□□ -0.39
RDH11-201ENST00000381346 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.61□□□□□ -0.39
RDH11-201ENST00000381346 NBR1Q14596 966 aa12.61□□□□□ -0.39
RDH11-201ENST00000381346 UGGT2Q9NYU1 1516 aa12.6□□□□□ -0.39
RDH11-201ENST00000381346 RTL5Q5HYW3 569 aaPredicted RBP12.6□□□□□ -0.39
RDH11-201ENST00000381346 IL27Q8NEV9 243 aa12.6□□□□□ -0.39
RDH11-201ENST00000381346 MTUS2Q5JR59 1369 aa12.58□□□□□ -0.39
RDH11-201ENST00000381346 CCDC18Q5T9S5 1454 aa12.57□□□□□ -0.4
RDH11-201ENST00000381346 EHBP1L1Q8N3D4 1523 aa12.57□□□□□ -0.4
RDH11-201ENST00000381346 RAB3GAP2Q9H2M9 1393 aa12.57□□□□□ -0.4
RDH11-201ENST00000381346 KIAA0586Q9BVV6 1533 aa12.57□□□□□ -0.4
RDH11-201ENST00000381346 HECW1Q76N89 1606 aa12.57□□□□□ -0.4
RDH11-201ENST00000381346 PKNOX2Q96KN3 472 aa12.57□□□□□ -0.4
RDH11-201ENST00000381346 SETD5Q9C0A6 1442 aa12.56□□□□□ -0.4
RDH11-201ENST00000381346 GRIN2AQ12879 1464 aa12.56□□□□□ -0.4
RDH11-201ENST00000381346 MAGI1Q96QZ7 1491 aaPredicted RBP12.56□□□□□ -0.4
RDH11-201ENST00000381346 FGD6Q6ZV73 1430 aa12.56□□□□□ -0.4
RDH11-201ENST00000381346 FAM50AQ14320 339 aaKnown RBP12.56□□□□□ -0.4
RDH11-201ENST00000381346 SUPT6HQ7KZ85 1726 aaKnown RBP12.55□□□□□ -0.4
RDH11-201ENST00000381346 AEBP2Q6ZN18 517 aaPredicted RBP12.55□□□□□ -0.4
RDH11-201ENST00000381346 RTN4Q9NQC3 1192 aaKnown RBP12.54□□□□□ -0.4
RDH11-201ENST00000381346 NCOA2Q15596 1464 aa12.54□□□□□ -0.4
RDH11-201ENST00000381346 CCER2I3L3R5 266 aa12.53□□□□□ -0.4
RDH11-201ENST00000381346 ARHGEF11O15085 1522 aa12.53□□□□□ -0.4
RDH11-201ENST00000381346 KIAA0556O60303 1618 aa12.52□□□□□ -0.4
RDH11-201ENST00000381346 MYOM3Q5VTT5 1437 aa12.52□□□□□ -0.41
RDH11-201ENST00000381346 EPRSP07814 1512 aaKnown RBP12.51□□□□□ -0.41
RDH11-201ENST00000381346 SYNJ2O15056 1496 aa12.51□□□□□ -0.41
RDH11-201ENST00000381346 MAGI3Q5TCQ9 1506 aa12.51□□□□□ -0.41
RDH11-201ENST00000381346 DISP1Q96F81 1524 aa12.51□□□□□ -0.41
RDH11-201ENST00000381346 MAPKBP1O60336 1514 aa12.5□□□□□ -0.41
RDH11-201ENST00000381346 TRIM52Q96A61 297 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms