RNA–Protein interactions for RNA: ENST00000381216.8

DPF3-202, Transcript of double PHD fingers 3, humanhuman

TSL 1 (best)

Gene DPF3, Length 3,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DPF3-202ENST00000381216 TOPBP1Q92547 1522 aa12.95□□□□□ -0.34
DPF3-202ENST00000381216 URB2Q14146 1524 aaKnown RBP12.93□□□□□ -0.34
DPF3-202ENST00000381216 FHOD3Q2V2M9 1422 aa12.93□□□□□ -0.34
DPF3-202ENST00000381216 ARID3CA6NKF2 412 aa12.92□□□□□ -0.34
DPF3-202ENST00000381216 YTHDC1Q96MU7 727 aaKnown RBP12.9□□□□□ -0.34
DPF3-202ENST00000381216 SCAF1Q9H7N4 1312 aaKnown RBP12.9□□□□□ -0.34
DPF3-202ENST00000381216 KIF21AQ7Z4S6 1674 aa12.89□□□□□ -0.35
DPF3-202ENST00000381216 DNMBPQ6XZF7 1577 aa12.89□□□□□ -0.35
DPF3-202ENST00000381216 PLEKHG5O94827 1062 aa12.88□□□□□ -0.35
DPF3-202ENST00000381216 FAM50AQ14320 339 aaKnown RBP12.87□□□□□ -0.35
DPF3-202ENST00000381216 ZNF316A6NFI3 1004 aaPredicted RBP12.84□□□□□ -0.35
DPF3-202ENST00000381216 NEUROD1Q13562 356 aa12.84□□□□□ -0.35
DPF3-202ENST00000381216 PCF11O94913 1555 aaKnown RBP12.84□□□□□ -0.35
DPF3-202ENST00000381216 PHLDB1Q86UU1 1377 aa12.84□□□□□ -0.35
DPF3-202ENST00000381216 DHX57Q6P158 1386 aaKnown RBP12.83□□□□□ -0.35
DPF3-202ENST00000381216 ABCA10Q8WWZ4 1543 aa12.82□□□□□ -0.36
DPF3-202ENST00000381216 CCNB3Q8WWL7 1395 aa12.82□□□□□ -0.36
DPF3-202ENST00000381216 MIER1Q8N108 512 aa12.81□□□□□ -0.36
DPF3-202ENST00000381216 TIAM1Q13009 1591 aa12.8□□□□□ -0.36
DPF3-202ENST00000381216 AQRO60306 1485 aaKnown RBP eCLIP12.79□□□□□ -0.36
DPF3-202ENST00000381216 RRBP1Q9P2E9 1410 aaKnown RBP12.77□□□□□ -0.36
DPF3-202ENST00000381216 LAMC3Q9Y6N6 1575 aa12.77□□□□□ -0.37
DPF3-202ENST00000381216 LRRC9Q6ZRR7 1453 aa12.76□□□□□ -0.37
DPF3-202ENST00000381216 SIN3AQ96ST3 1273 aa12.76□□□□□ -0.37
DPF3-202ENST00000381216 GAPVD1Q14C86 1478 aa12.76□□□□□ -0.37
DPF3-202ENST00000381216 RAB3GAP2Q9H2M9 1393 aa12.75□□□□□ -0.37
DPF3-202ENST00000381216 WDR97A6NE52 1622 aa12.75□□□□□ -0.37
DPF3-202ENST00000381216 HIRIP3Q9BW71 556 aaPredicted RBP12.73□□□□□ -0.37
DPF3-202ENST00000381216 PDS5BQ9NTI5 1447 aa12.73□□□□□ -0.37
DPF3-202ENST00000381216 CTTNBP2Q8WZ74 1663 aa12.72□□□□□ -0.37
DPF3-202ENST00000381216 LRRIQ1Q96JM4 1722 aa12.72□□□□□ -0.37
DPF3-202ENST00000381216 ZNF608Q9ULD9 1512 aaPredicted RBP12.72□□□□□ -0.37
DPF3-202ENST00000381216 TIMELESSQ9UNS1 1208 aa12.72□□□□□ -0.37
DPF3-202ENST00000381216 ABCA5Q8WWZ7 1642 aa12.71□□□□□ -0.37
DPF3-202ENST00000381216 ACIN1Q9UKV3 1341 aaKnown RBP12.69□□□□□ -0.38
DPF3-202ENST00000381216 KLHL34Q8N239 644 aa12.69□□□□□ -0.38
DPF3-202ENST00000381216 TARBP1Q13395 1621 aaKnown RBP12.68□□□□□ -0.38
DPF3-202ENST00000381216 ARXQ96QS3 562 aa12.68□□□□□ -0.38
DPF3-202ENST00000381216 CUL7Q14999 1698 aa12.68□□□□□ -0.38
DPF3-202ENST00000381216 CHIC2Q9UKJ5 165 aa12.67□□□□□ -0.38
DPF3-202ENST00000381216 CFAP43Q8NDM7 1665 aa12.67□□□□□ -0.38
DPF3-202ENST00000381216 GTF3C3Q9Y5Q9 886 aa12.66□□□□□ -0.38
DPF3-202ENST00000381216 FHAD1B1AJZ9 1412 aa12.66□□□□□ -0.38
DPF3-202ENST00000381216 FBLN2P98095 1184 aa12.66□□□□□ -0.38
DPF3-202ENST00000381216 MAPKBP1O60336 1514 aa12.65□□□□□ -0.38
DPF3-202ENST00000381216 SNAPC4Q5SXM2 1469 aa12.65□□□□□ -0.38
DPF3-202ENST00000381216 MTUS2Q5JR59 1369 aa12.64□□□□□ -0.39
DPF3-202ENST00000381216 PTPRKQ15262 1439 aa12.64□□□□□ -0.39
DPF3-202ENST00000381216 CASKIN1Q8WXD9 1431 aa12.63□□□□□ -0.39
DPF3-202ENST00000381216 PBRM1Q86U86 1689 aa12.62□□□□□ -0.39
DPF3-202ENST00000381216 MAGI3Q5TCQ9 1506 aa12.62□□□□□ -0.39
DPF3-202ENST00000381216 FYCO1Q9BQS8 1478 aa12.62□□□□□ -0.39
DPF3-202ENST00000381216 KCNH8Q96L42 1107 aa12.62□□□□□ -0.39
DPF3-202ENST00000381216 SETD5Q9C0A6 1442 aa12.61□□□□□ -0.39
DPF3-202ENST00000381216 CDK13Q14004 1512 aaKnown RBP12.61□□□□□ -0.39
DPF3-202ENST00000381216 RRP7BPQ9NSQ0 103 aa12.61□□□□□ -0.39
DPF3-202ENST00000381216 EFCAB5A4FU69 1503 aa12.58□□□□□ -0.4
DPF3-202ENST00000381216 SAMD9Q5K651 1589 aa12.58□□□□□ -0.4
DPF3-202ENST00000381216 MRC2Q9UBG0 1479 aa12.58□□□□□ -0.4
DPF3-202ENST00000381216 FMN1Q68DA7 1419 aa12.57□□□□□ -0.4
DPF3-202ENST00000381216 FGD6Q6ZV73 1430 aa12.57□□□□□ -0.4
DPF3-202ENST00000381216 NCOA2Q15596 1464 aa12.56□□□□□ -0.4
DPF3-202ENST00000381216 ERCC6Q03468 1493 aa12.56□□□□□ -0.4
DPF3-202ENST00000381216 GRIN2BQ13224 1484 aa12.56□□□□□ -0.4
DPF3-202ENST00000381216 MAP3K1Q13233 1512 aa12.56□□□□□ -0.4
DPF3-202ENST00000381216 FOXD1Q16676 465 aa12.56□□□□□ -0.4
DPF3-202ENST00000381216 ADAMTS12P58397 1594 aa12.54□□□□□ -0.4
DPF3-202ENST00000381216 ZNF644Q9H582 1327 aaPredicted RBP12.54□□□□□ -0.4
DPF3-202ENST00000381216 CENPBP07199 599 aaPredicted RBP12.52□□□□□ -0.41
DPF3-202ENST00000381216 IQGAP2Q13576 1575 aa12.52□□□□□ -0.41
DPF3-202ENST00000381216 THOC2Q8NI27 1593 aaKnown RBP12.51□□□□□ -0.41
DPF3-202ENST00000381216 DDX10Q13206 875 aaKnown RBP12.5□□□□□ -0.41
DPF3-202ENST00000381216 KDM6BO15054 1643 aa12.5□□□□□ -0.41
DPF3-202ENST00000381216 EIF4G3O43432 1585 aaKnown RBP12.5□□□□□ -0.41
DPF3-202ENST00000381216 CCDC18Q5T9S5 1454 aa12.48□□□□□ -0.41
DPF3-202ENST00000381216 CLSPNQ9HAW4 1339 aa12.48□□□□□ -0.41
DPF3-202ENST00000381216 CHMP7Q8WUX9 453 aaPredicted RBP12.48□□□□□ -0.41
DPF3-202ENST00000381216 TRIM52Q96A61 297 aa12.48□□□□□ -0.41
DPF3-202ENST00000381216 MYOM3Q5VTT5 1437 aa12.48□□□□□ -0.41
DPF3-202ENST00000381216 EPRSP07814 1512 aaKnown RBP12.47□□□□□ -0.41
DPF3-202ENST00000381216 ZNF777Q9ULD5 760 aaPredicted RBP12.46□□□□□ -0.42
DPF3-202ENST00000381216 PTPN23Q9H3S7 1636 aa12.45□□□□□ -0.42
DPF3-202ENST00000381216 SUPT6HQ7KZ85 1726 aaKnown RBP12.45□□□□□ -0.42
DPF3-202ENST00000381216 WDR62O43379 1518 aa12.45□□□□□ -0.42
DPF3-202ENST00000381216 DISP1Q96F81 1524 aa12.44□□□□□ -0.42
DPF3-202ENST00000381216 NAIPQ13075 1403 aa12.44□□□□□ -0.42
DPF3-202ENST00000381216 PLB1Q6P1J6 1458 aa12.44□□□□□ -0.42
DPF3-202ENST00000381216 IFT140Q96RY7 1462 aa12.44□□□□□ -0.42
DPF3-202ENST00000381216 UGGT2Q9NYU1 1516 aa12.43□□□□□ -0.42
DPF3-202ENST00000381216 GRIN2AQ12879 1464 aa12.42□□□□□ -0.42
DPF3-202ENST00000381216 EHBP1L1Q8N3D4 1523 aa12.42□□□□□ -0.42
DPF3-202ENST00000381216 PRG4Q92954 1404 aaPredicted RBP12.42□□□□□ -0.42
DPF3-202ENST00000381216 CEP170Q5SW79 1584 aa12.41□□□□□ -0.42
DPF3-202ENST00000381216 PODXL2Q9NZ53 605 aa12.41□□□□□ -0.42
DPF3-202ENST00000381216 HECW1Q76N89 1606 aa12.4□□□□□ -0.42
DPF3-202ENST00000381216 NUP153P49790 1475 aaKnown RBP12.4□□□□□ -0.42
DPF3-202ENST00000381216 TULP1O00294 542 aaPredicted RBP12.4□□□□□ -0.42
DPF3-202ENST00000381216 KIAA0556O60303 1618 aa12.4□□□□□ -0.43
DPF3-202ENST00000381216 PPP1R15AO75807 674 aaPredicted RBP12.39□□□□□ -0.43
DPF3-202ENST00000381216 HFM1A2PYH4 1435 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms