RNA–Protein interactions for RNA: ENST00000381216.8

DPF3-202, Transcript of double PHD fingers 3, humanhuman

TSL 1 (best)

Gene DPF3, Length 3,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DPF3-202ENST00000381216 NISCHQ9Y2I1 1504 aa18.27■□□□□ 0.52
DPF3-202ENST00000381216 SHROOM4Q9ULL8 1493 aa15.92■□□□□ 0.14
DPF3-202ENST00000381216 DCAF8L2P0C7V8 631 aa15.64■□□□□ 0.09
DPF3-202ENST00000381216 SUPT5HO00267 1087 aaKnown RBP15.46■□□□□ 0.07
DPF3-202ENST00000381216 CCDC180Q9P1Z9 1646 aa15.44■□□□□ 0.06
DPF3-202ENST00000381216 ZCCHC6Q5VYS8 1495 aaKnown RBP15.39■□□□□ 0.05
DPF3-202ENST00000381216 ABCC9O60706 1549 aa14.87□□□□□ -0.03
DPF3-202ENST00000381216 SLC24A1O60721 1099 aa14.82□□□□□ -0.04
DPF3-202ENST00000381216 SCRIBQ14160 1630 aa14.81□□□□□ -0.04
DPF3-202ENST00000381216 MYO15BQ96JP2 1530 aa14.81□□□□□ -0.04
DPF3-202ENST00000381216 CHIC1Q5VXU3 224 aa14.76□□□□□ -0.05
DPF3-202ENST00000381216 DCAF1Q9Y4B6 1507 aa14.74□□□□□ -0.05
DPF3-202ENST00000381216 LOC105371045A0A1W2PR82 267 aa14.53□□□□□ -0.08
DPF3-202ENST00000381216 EHMT2Q96KQ7 1210 aa14.49□□□□□ -0.09
DPF3-202ENST00000381216 CECR2Q9BXF3 1484 aa14.47□□□□□ -0.09
DPF3-202ENST00000381216 RSF1Q96T23 1441 aaPredicted RBP14.47□□□□□ -0.09
DPF3-202ENST00000381216 RB1CC1Q8TDY2 1594 aa14.41□□□□□ -0.1
DPF3-202ENST00000381216 FAM9AQ8IZU1 332 aaPredicted RBP14.38□□□□□ -0.11
DPF3-202ENST00000381216 MROH2BQ7Z745 1585 aa14.34□□□□□ -0.11
DPF3-202ENST00000381216 NACADO15069 1562 aa14.33□□□□□ -0.11
DPF3-202ENST00000381216 PABPN1Q86U42 306 aaKnown RBP eCLIP14.3□□□□□ -0.12
DPF3-202ENST00000381216 WIZO95785 1651 aa14.29□□□□□ -0.12
DPF3-202ENST00000381216 PCGF6Q9BYE7 350 aa14.28□□□□□ -0.12
DPF3-202ENST00000381216 MYT1Q01538 1121 aa14.22□□□□□ -0.13
DPF3-202ENST00000381216 PELP1Q8IZL8 1130 aaKnown RBP14.22□□□□□ -0.13
DPF3-202ENST00000381216 TRIM41Q8WV44 630 aa14.22□□□□□ -0.13
DPF3-202ENST00000381216 UNC13AQ9UPW8 1703 aa14.19□□□□□ -0.14
DPF3-202ENST00000381216 PRKCSHP14314 528 aaPredicted RBP14.14□□□□□ -0.15
DPF3-202ENST00000381216 PPARGC1BQ86YN6 1023 aaKnown RBP14.07□□□□□ -0.16
DPF3-202ENST00000381216 ABCC8Q09428 1581 aa13.99□□□□□ -0.17
DPF3-202ENST00000381216 TTBK1Q5TCY1 1321 aaPredicted RBP13.98□□□□□ -0.17
DPF3-202ENST00000381216 BAZ1AQ9NRL2 1556 aaPredicted RBP13.98□□□□□ -0.17
DPF3-202ENST00000381216 SMARCA4P51532 1647 aa13.97□□□□□ -0.17
DPF3-202ENST00000381216 BICRAQ9NZM4 1560 aa13.97□□□□□ -0.17
DPF3-202ENST00000381216 HRCP23327 699 aa13.96□□□□□ -0.18
DPF3-202ENST00000381216 CCDC88BA6NC98 1476 aa13.92□□□□□ -0.18
DPF3-202ENST00000381216 APLP2Q06481 763 aa13.88□□□□□ -0.19
DPF3-202ENST00000381216 SMARCA2P51531 1590 aa13.86□□□□□ -0.19
DPF3-202ENST00000381216 EIF4G1Q04637 1599 aaKnown RBP13.86□□□□□ -0.19
DPF3-202ENST00000381216 TOP2AP11388 1531 aaKnown RBP13.86□□□□□ -0.19
DPF3-202ENST00000381216 RUSC2Q8N2Y8 1516 aa13.8□□□□□ -0.2
DPF3-202ENST00000381216 TRIM26Q12899 539 aaPredicted RBP13.79□□□□□ -0.2
DPF3-202ENST00000381216 SOGA1O94964 1423 aa13.79□□□□□ -0.2
DPF3-202ENST00000381216 DAXXQ9UER7 740 aaPredicted RBP13.78□□□□□ -0.2
DPF3-202ENST00000381216 RANGAP1P46060 587 aaPredicted RBP13.71□□□□□ -0.21
DPF3-202ENST00000381216 ATAD2BQ9ULI0 1458 aa13.66□□□□□ -0.22
DPF3-202ENST00000381216 BAZ1BQ9UIG0 1483 aaKnown RBP13.63□□□□□ -0.23
DPF3-202ENST00000381216 UBTFP17480 764 aaKnown RBP13.63□□□□□ -0.23
DPF3-202ENST00000381216 ERICH6Q7L0X2 663 aa13.62□□□□□ -0.23
DPF3-202ENST00000381216 SYNJ1O43426 1573 aa13.61□□□□□ -0.23
DPF3-202ENST00000381216 WRNQ14191 1432 aaPredicted RBP eCLIP13.58□□□□□ -0.24
DPF3-202ENST00000381216 CSRNP3Q8WYN3 585 aa13.56□□□□□ -0.24
DPF3-202ENST00000381216 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.56□□□□□ -0.24
DPF3-202ENST00000381216 PEG3Q9GZU2 1588 aa13.54□□□□□ -0.24
DPF3-202ENST00000381216 CEP162Q5TB80 1403 aa13.53□□□□□ -0.24
DPF3-202ENST00000381216 RAPGEF2Q9Y4G8 1499 aa13.41□□□□□ -0.26
DPF3-202ENST00000381216 TNIKQ9UKE5 1360 aa13.39□□□□□ -0.27
DPF3-202ENST00000381216 GOLGA3Q08378 1498 aa13.38□□□□□ -0.27
DPF3-202ENST00000381216 CCER1Q8TC90 406 aaPredicted RBP13.37□□□□□ -0.27
DPF3-202ENST00000381216 DNAJC5BQ9UF47 199 aa13.35□□□□□ -0.27
DPF3-202ENST00000381216 HNRNPUL2Q1KMD3 747 aaKnown RBP13.33□□□□□ -0.28
DPF3-202ENST00000381216 CUX1P39880 1505 aa13.33□□□□□ -0.28
DPF3-202ENST00000381216 NCAPD3P42695 1498 aa13.32□□□□□ -0.28
DPF3-202ENST00000381216 TOP2BQ02880 1626 aa13.3□□□□□ -0.28
DPF3-202ENST00000381216 CLIP1P30622 1438 aa13.3□□□□□ -0.28
DPF3-202ENST00000381216 EEA1Q15075 1411 aa13.29□□□□□ -0.28
DPF3-202ENST00000381216 CEP164Q9UPV0 1460 aa13.29□□□□□ -0.28
DPF3-202ENST00000381216 HMGXB3Q12766 1538 aa13.26□□□□□ -0.29
DPF3-202ENST00000381216 CC2D2AQ9P2K1 1620 aa13.26□□□□□ -0.29
DPF3-202ENST00000381216 KIF21BO75037 1637 aa13.24□□□□□ -0.29
DPF3-202ENST00000381216 NESP48681 1621 aa13.23□□□□□ -0.29
DPF3-202ENST00000381216 BIVM-ERCC5R4GMW8 1640 aa13.23□□□□□ -0.29
DPF3-202ENST00000381216 CFTRP13569 1480 aa13.22□□□□□ -0.29
DPF3-202ENST00000381216 ZEB1P37275 1124 aaPredicted RBP13.2□□□□□ -0.3
DPF3-202ENST00000381216 KANK4Q5T7N3 995 aaPredicted RBP13.19□□□□□ -0.3
DPF3-202ENST00000381216 P3H3Q8IVL6 736 aa13.17□□□□□ -0.3
DPF3-202ENST00000381216 VPS8Q8N3P4 1428 aa13.15□□□□□ -0.3
DPF3-202ENST00000381216 CUX2O14529 1486 aa13.15□□□□□ -0.3
DPF3-202ENST00000381216 CADPSQ9ULU8 1353 aa13.14□□□□□ -0.31
DPF3-202ENST00000381216 ARAP1Q96P48 1450 aa13.13□□□□□ -0.31
DPF3-202ENST00000381216 PRXQ9BXM0 1461 aa13.13□□□□□ -0.31
DPF3-202ENST00000381216 ITGAEP38570 1179 aa13.13□□□□□ -0.31
DPF3-202ENST00000381216 RAD54L2Q9Y4B4 1467 aa13.12□□□□□ -0.31
DPF3-202ENST00000381216 FGD5Q6ZNL6 1462 aa13.12□□□□□ -0.31
DPF3-202ENST00000381216 PLPPR3Q6T4P5 718 aa13.11□□□□□ -0.31
DPF3-202ENST00000381216 KIF27Q86VH2 1401 aa13.11□□□□□ -0.31
DPF3-202ENST00000381216 NCBP3Q53F19 620 aaKnown RBP13.09□□□□□ -0.31
DPF3-202ENST00000381216 ATP1B4Q9UN42 357 aaPredicted RBP13.09□□□□□ -0.31
DPF3-202ENST00000381216 BCL11AQ9H165 835 aa13.07□□□□□ -0.32
DPF3-202ENST00000381216 FANCD2Q9BXW9 1451 aa13.07□□□□□ -0.32
DPF3-202ENST00000381216 IGF1RP08069 1367 aa13.07□□□□□ -0.32
DPF3-202ENST00000381216 ARHGAP35Q9NRY4 1499 aa13.03□□□□□ -0.32
DPF3-202ENST00000381216 PRDM2Q13029 1718 aa13.03□□□□□ -0.32
DPF3-202ENST00000381216 ERICH3Q5RHP9 1530 aa13.01□□□□□ -0.33
DPF3-202ENST00000381216 EIF5BO60841 1220 aaKnown RBP13.01□□□□□ -0.33
DPF3-202ENST00000381216 CARMIL1Q5VZK9 1371 aa13□□□□□ -0.33
DPF3-202ENST00000381216 TDRD9Q8NDG6 1382 aaKnown RBP12.98□□□□□ -0.33
DPF3-202ENST00000381216 POLA1P09884 1462 aaPredicted RBP12.97□□□□□ -0.33
DPF3-202ENST00000381216 DIEXFQ68CQ4 756 aaKnown RBP12.96□□□□□ -0.33
DPF3-202ENST00000381216 RTN4Q9NQC3 1192 aaKnown RBP12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 165.9 ms