RNA–Protein interactions for RNA: ENST00000381077.9

PUDP-201, Transcript of pseudouridine 5'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUDP, Length 2,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-201ENST00000381077 DIEXFQ68CQ4 756 aaKnown RBP18.82■□□□□ 0.6
PUDP-201ENST00000381077 RAD54L2Q9Y4B4 1467 aa18.8■□□□□ 0.6
PUDP-201ENST00000381077 URB2Q14146 1524 aaKnown RBP18.79■□□□□ 0.6
PUDP-201ENST00000381077 ABCA5Q8WWZ7 1642 aa18.79■□□□□ 0.6
PUDP-201ENST00000381077 LRRC9Q6ZRR7 1453 aa18.77■□□□□ 0.6
PUDP-201ENST00000381077 FYCO1Q9BQS8 1478 aa18.77■□□□□ 0.6
PUDP-201ENST00000381077 DHX57Q6P158 1386 aaKnown RBP18.75■□□□□ 0.59
PUDP-201ENST00000381077 CASKIN1Q8WXD9 1431 aa18.73■□□□□ 0.59
PUDP-201ENST00000381077 PCF11O94913 1555 aaKnown RBP18.72■□□□□ 0.59
PUDP-201ENST00000381077 FMN1Q68DA7 1419 aa18.71■□□□□ 0.59
PUDP-201ENST00000381077 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.7■□□□□ 0.58
PUDP-201ENST00000381077 GAPVD1Q14C86 1478 aa18.69■□□□□ 0.58
PUDP-201ENST00000381077 SAMD9Q5K651 1589 aa18.67■□□□□ 0.58
PUDP-201ENST00000381077 THOC2Q8NI27 1593 aaKnown RBP18.66■□□□□ 0.58
PUDP-201ENST00000381077 KIF21AQ7Z4S6 1674 aa18.65■□□□□ 0.58
PUDP-201ENST00000381077 TARBP1Q13395 1621 aaKnown RBP18.64■□□□□ 0.57
PUDP-201ENST00000381077 FHOD3Q2V2M9 1422 aa18.61■□□□□ 0.57
PUDP-201ENST00000381077 CENPBP07199 599 aaPredicted RBP18.6■□□□□ 0.57
PUDP-201ENST00000381077 SNAPC4Q5SXM2 1469 aa18.6■□□□□ 0.57
PUDP-201ENST00000381077 PHLDB1Q86UU1 1377 aa18.59■□□□□ 0.57
PUDP-201ENST00000381077 SETD5Q9C0A6 1442 aa18.57■□□□□ 0.56
PUDP-201ENST00000381077 ACIN1Q9UKV3 1341 aaKnown RBP18.56■□□□□ 0.56
PUDP-201ENST00000381077 TDRD9Q8NDG6 1382 aaKnown RBP18.55■□□□□ 0.56
PUDP-201ENST00000381077 RAB3GAP2Q9H2M9 1393 aa18.54■□□□□ 0.56
PUDP-201ENST00000381077 MRC2Q9UBG0 1479 aa18.54■□□□□ 0.56
PUDP-201ENST00000381077 PBRM1Q86U86 1689 aa18.53■□□□□ 0.56
PUDP-201ENST00000381077 GRIN2BQ13224 1484 aa18.51■□□□□ 0.55
PUDP-201ENST00000381077 SCAF1Q9H7N4 1312 aaKnown RBP18.49■□□□□ 0.55
PUDP-201ENST00000381077 ADAMTS12P58397 1594 aa18.49■□□□□ 0.55
PUDP-201ENST00000381077 CCDC18Q5T9S5 1454 aa18.48■□□□□ 0.55
PUDP-201ENST00000381077 MAPKBP1O60336 1514 aa18.48■□□□□ 0.55
PUDP-201ENST00000381077 EHBP1L1Q8N3D4 1523 aa18.48■□□□□ 0.55
PUDP-201ENST00000381077 TIMELESSQ9UNS1 1208 aa18.47■□□□□ 0.55
PUDP-201ENST00000381077 FGD6Q6ZV73 1430 aa18.46■□□□□ 0.55
PUDP-201ENST00000381077 P3H3Q8IVL6 736 aa18.46■□□□□ 0.55
PUDP-201ENST00000381077 IFT140Q96RY7 1462 aa18.45■□□□□ 0.54
PUDP-201ENST00000381077 SUPT6HQ7KZ85 1726 aaKnown RBP18.44■□□□□ 0.54
PUDP-201ENST00000381077 IQGAP2Q13576 1575 aa18.44■□□□□ 0.54
PUDP-201ENST00000381077 WDR62O43379 1518 aa18.44■□□□□ 0.54
PUDP-201ENST00000381077 MTUS2Q5JR59 1369 aa18.43■□□□□ 0.54
PUDP-201ENST00000381077 HECW1Q76N89 1606 aa18.42■□□□□ 0.54
PUDP-201ENST00000381077 LRRIQ1Q96JM4 1722 aa18.41■□□□□ 0.54
PUDP-201ENST00000381077 ARHGEF11O15085 1522 aa18.41■□□□□ 0.54
PUDP-201ENST00000381077 NEUROD1Q13562 356 aa18.4■□□□□ 0.54
PUDP-201ENST00000381077 UGGT2Q9NYU1 1516 aa18.4■□□□□ 0.54
PUDP-201ENST00000381077 MYOM3Q5VTT5 1437 aa18.39■□□□□ 0.53
PUDP-201ENST00000381077 FAM50AQ14320 339 aaKnown RBP18.39■□□□□ 0.53
PUDP-201ENST00000381077 ITGAEP38570 1179 aa18.38■□□□□ 0.53
PUDP-201ENST00000381077 NCOA2Q15596 1464 aa18.38■□□□□ 0.53
PUDP-201ENST00000381077 DNAJC5BQ9UF47 199 aa18.37■□□□□ 0.53
PUDP-201ENST00000381077 ATP1B4Q9UN42 357 aaPredicted RBP18.37■□□□□ 0.53
PUDP-201ENST00000381077 HFM1A2PYH4 1435 aa18.36■□□□□ 0.53
PUDP-201ENST00000381077 MIER1Q8N108 512 aa18.34■□□□□ 0.53
PUDP-201ENST00000381077 TCOF1Q13428 1488 aaKnown RBP18.33■□□□□ 0.52
PUDP-201ENST00000381077 AKNAQ7Z591 1439 aa18.31■□□□□ 0.52
PUDP-201ENST00000381077 KIAA0586Q9BVV6 1533 aa18.31■□□□□ 0.52
PUDP-201ENST00000381077 PTPN23Q9H3S7 1636 aa18.3■□□□□ 0.52
PUDP-201ENST00000381077 MIA2Q96PC5 1412 aa18.29■□□□□ 0.52
PUDP-201ENST00000381077 UACAQ9BZF9 1416 aa18.29■□□□□ 0.52
PUDP-201ENST00000381077 PELP1Q8IZL8 1130 aaKnown RBP18.29■□□□□ 0.52
PUDP-201ENST00000381077 EPRSP07814 1512 aaKnown RBP18.28■□□□□ 0.52
PUDP-201ENST00000381077 MAGI3Q5TCQ9 1506 aa18.25■□□□□ 0.51
PUDP-201ENST00000381077 MAGI1Q96QZ7 1491 aaPredicted RBP18.25■□□□□ 0.51
PUDP-201ENST00000381077 KIAA0556O60303 1618 aa18.24■□□□□ 0.51
PUDP-201ENST00000381077 NAIPQ13075 1403 aa18.24■□□□□ 0.51
PUDP-201ENST00000381077 EIF4G3O43432 1585 aaKnown RBP18.23■□□□□ 0.51
PUDP-201ENST00000381077 GCC2Q8IWJ2 1684 aa18.23■□□□□ 0.51
PUDP-201ENST00000381077 GRIN2AQ12879 1464 aa18.23■□□□□ 0.51
PUDP-201ENST00000381077 PTPRKQ15262 1439 aa18.22■□□□□ 0.51
PUDP-201ENST00000381077 ZNF608Q9ULD9 1512 aaPredicted RBP18.21■□□□□ 0.51
PUDP-201ENST00000381077 GTF3C3Q9Y5Q9 886 aa18.2■□□□□ 0.5
PUDP-201ENST00000381077 DISP1Q96F81 1524 aa18.19■□□□□ 0.5
PUDP-201ENST00000381077 RAPGEF6Q8TEU7 1601 aa18.15■□□□□ 0.5
PUDP-201ENST00000381077 PPP1R15AO75807 674 aaPredicted RBP18.15■□□□□ 0.5
PUDP-201ENST00000381077 SYNJ2O15056 1496 aa18.15■□□□□ 0.5
PUDP-201ENST00000381077 ERCC6Q03468 1493 aa18.13■□□□□ 0.49
PUDP-201ENST00000381077 CDK13Q14004 1512 aaKnown RBP18.12■□□□□ 0.49
PUDP-201ENST00000381077 ROCK1Q13464 1354 aa18.12■□□□□ 0.49
PUDP-201ENST00000381077 SIN3AQ96ST3 1273 aa18.11■□□□□ 0.49
PUDP-201ENST00000381077 CDK11AQ9UQ88 783 aaPredicted RBP18.11■□□□□ 0.49
PUDP-201ENST00000381077 TONSLQ96HA7 1378 aa18.1■□□□□ 0.49
PUDP-201ENST00000381077 NUP153P49790 1475 aaKnown RBP18.1■□□□□ 0.49
PUDP-201ENST00000381077 NUP160Q12769 1436 aa18.08■□□□□ 0.48
PUDP-201ENST00000381077 YTHDC1Q96MU7 727 aaKnown RBP18.08■□□□□ 0.48
PUDP-201ENST00000381077 DNMT1P26358 1616 aaKnown RBP18.07■□□□□ 0.48
PUDP-201ENST00000381077 ADCY10Q96PN6 1610 aa18.06■□□□□ 0.48
PUDP-201ENST00000381077 CEP170Q5SW79 1584 aa18.05■□□□□ 0.48
PUDP-201ENST00000381077 CARMIL2Q6F5E8 1435 aa18.05■□□□□ 0.48
PUDP-201ENST00000381077 ITSN2Q9NZM3 1697 aa18.05■□□□□ 0.48
PUDP-201ENST00000381077 TROQ12816 1431 aaPredicted RBP18.04■□□□□ 0.48
PUDP-201ENST00000381077 DAPK1P53355 1430 aa18.02■□□□□ 0.48
PUDP-201ENST00000381077 CHMP7Q8WUX9 453 aaPredicted RBP17.99■□□□□ 0.47
PUDP-201ENST00000381077 KDM5BQ9UGL1 1544 aa17.99■□□□□ 0.47
PUDP-201ENST00000381077 ABCC5O15440 1437 aa17.97■□□□□ 0.47
PUDP-201ENST00000381077 DENND4BO75064 1496 aaPredicted RBP17.96■□□□□ 0.47
PUDP-201ENST00000381077 ADGBQ8N7X0 1667 aa17.94■□□□□ 0.46
PUDP-201ENST00000381077 CCER2I3L3R5 266 aa17.94■□□□□ 0.46
PUDP-201ENST00000381077 ADGRL2O95490 1459 aa17.94■□□□□ 0.46
PUDP-201ENST00000381077 RRP7BPQ9NSQ0 103 aa17.93■□□□□ 0.46
PUDP-201ENST00000381077 ABCA8O94911 1581 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms