RNA–Protein interactions for RNA: ENST00000381018.7

TRIM23-203, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-203ENST00000381018 CTTNBP2Q8WZ74 1663 aa17.57■□□□□ 0.4
TRIM23-203ENST00000381018 RAD54L2Q9Y4B4 1467 aa17.56■□□□□ 0.4
TRIM23-203ENST00000381018 PCF11O94913 1555 aaKnown RBP17.55■□□□□ 0.4
TRIM23-203ENST00000381018 NESP48681 1621 aa17.55■□□□□ 0.4
TRIM23-203ENST00000381018 LRRC9Q6ZRR7 1453 aa17.55■□□□□ 0.4
TRIM23-203ENST00000381018 LAMC3Q9Y6N6 1575 aa17.54■□□□□ 0.4
TRIM23-203ENST00000381018 WDR97A6NE52 1622 aa17.54■□□□□ 0.4
TRIM23-203ENST00000381018 EFCAB5A4FU69 1503 aa17.53■□□□□ 0.4
TRIM23-203ENST00000381018 MIER1Q8N108 512 aa17.48■□□□□ 0.39
TRIM23-203ENST00000381018 FYCO1Q9BQS8 1478 aa17.48■□□□□ 0.39
TRIM23-203ENST00000381018 URB2Q14146 1524 aaKnown RBP17.46■□□□□ 0.39
TRIM23-203ENST00000381018 PELP1Q8IZL8 1130 aaKnown RBP17.46■□□□□ 0.38
TRIM23-203ENST00000381018 AQRO60306 1485 aaKnown RBP eCLIP17.45■□□□□ 0.38
TRIM23-203ENST00000381018 ITGAEP38570 1179 aa17.45■□□□□ 0.38
TRIM23-203ENST00000381018 GTF3C3Q9Y5Q9 886 aa17.45■□□□□ 0.38
TRIM23-203ENST00000381018 FHOD3Q2V2M9 1422 aa17.44■□□□□ 0.38
TRIM23-203ENST00000381018 PHLDB1Q86UU1 1377 aa17.44■□□□□ 0.38
TRIM23-203ENST00000381018 ABCA5Q8WWZ7 1642 aa17.44■□□□□ 0.38
TRIM23-203ENST00000381018 RAB3GAP2Q9H2M9 1393 aa17.43■□□□□ 0.38
TRIM23-203ENST00000381018 CASKIN1Q8WXD9 1431 aa17.43■□□□□ 0.38
TRIM23-203ENST00000381018 P3H3Q8IVL6 736 aa17.41■□□□□ 0.38
TRIM23-203ENST00000381018 SETD5Q9C0A6 1442 aa17.4■□□□□ 0.38
TRIM23-203ENST00000381018 MAPKBP1O60336 1514 aa17.39■□□□□ 0.37
TRIM23-203ENST00000381018 YTHDC1Q96MU7 727 aaKnown RBP17.39■□□□□ 0.37
TRIM23-203ENST00000381018 KIF21AQ7Z4S6 1674 aa17.38■□□□□ 0.37
TRIM23-203ENST00000381018 FMN1Q68DA7 1419 aa17.37■□□□□ 0.37
TRIM23-203ENST00000381018 PDS5BQ9NTI5 1447 aa17.37■□□□□ 0.37
TRIM23-203ENST00000381018 SAMD9Q5K651 1589 aa17.36■□□□□ 0.37
TRIM23-203ENST00000381018 ATP1B4Q9UN42 357 aaPredicted RBP17.36■□□□□ 0.37
TRIM23-203ENST00000381018 FAM50AQ14320 339 aaKnown RBP17.35■□□□□ 0.37
TRIM23-203ENST00000381018 GAPVD1Q14C86 1478 aa17.35■□□□□ 0.37
TRIM23-203ENST00000381018 SNAPC4Q5SXM2 1469 aa17.33■□□□□ 0.37
TRIM23-203ENST00000381018 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.33■□□□□ 0.36
TRIM23-203ENST00000381018 LRRIQ1Q96JM4 1722 aa17.31■□□□□ 0.36
TRIM23-203ENST00000381018 TDRD9Q8NDG6 1382 aaKnown RBP17.31■□□□□ 0.36
TRIM23-203ENST00000381018 TARBP1Q13395 1621 aaKnown RBP17.29■□□□□ 0.36
TRIM23-203ENST00000381018 THOC2Q8NI27 1593 aaKnown RBP17.29■□□□□ 0.36
TRIM23-203ENST00000381018 PBRM1Q86U86 1689 aa17.27■□□□□ 0.35
TRIM23-203ENST00000381018 FGD6Q6ZV73 1430 aa17.26■□□□□ 0.35
TRIM23-203ENST00000381018 GRIN2BQ13224 1484 aa17.24■□□□□ 0.35
TRIM23-203ENST00000381018 MTUS2Q5JR59 1369 aa17.24■□□□□ 0.35
TRIM23-203ENST00000381018 SUPT6HQ7KZ85 1726 aaKnown RBP17.23■□□□□ 0.35
TRIM23-203ENST00000381018 EHBP1L1Q8N3D4 1523 aa17.21■□□□□ 0.35
TRIM23-203ENST00000381018 TIMELESSQ9UNS1 1208 aa17.18■□□□□ 0.34
TRIM23-203ENST00000381018 NCOA2Q15596 1464 aa17.18■□□□□ 0.34
TRIM23-203ENST00000381018 DNAJC5BQ9UF47 199 aa17.17■□□□□ 0.34
TRIM23-203ENST00000381018 MYOM3Q5VTT5 1437 aa17.16■□□□□ 0.34
TRIM23-203ENST00000381018 PTPN23Q9H3S7 1636 aa17.16■□□□□ 0.34
TRIM23-203ENST00000381018 ADAMTS12P58397 1594 aa17.16■□□□□ 0.34
TRIM23-203ENST00000381018 CCDC18Q5T9S5 1454 aa17.16■□□□□ 0.34
TRIM23-203ENST00000381018 HECW1Q76N89 1606 aa17.15■□□□□ 0.34
TRIM23-203ENST00000381018 IQGAP2Q13576 1575 aa17.15■□□□□ 0.34
TRIM23-203ENST00000381018 SIN3AQ96ST3 1273 aa17.15■□□□□ 0.34
TRIM23-203ENST00000381018 HFM1A2PYH4 1435 aa17.15■□□□□ 0.34
TRIM23-203ENST00000381018 UGGT2Q9NYU1 1516 aa17.14■□□□□ 0.33
TRIM23-203ENST00000381018 MRC2Q9UBG0 1479 aa17.13■□□□□ 0.33
TRIM23-203ENST00000381018 ARHGEF11O15085 1522 aa17.12■□□□□ 0.33
TRIM23-203ENST00000381018 PTPRKQ15262 1439 aa17.1■□□□□ 0.33
TRIM23-203ENST00000381018 UACAQ9BZF9 1416 aa17.1■□□□□ 0.33
TRIM23-203ENST00000381018 MAGI3Q5TCQ9 1506 aa17.1■□□□□ 0.33
TRIM23-203ENST00000381018 NAIPQ13075 1403 aa17.07■□□□□ 0.32
TRIM23-203ENST00000381018 GCC2Q8IWJ2 1684 aa17.07■□□□□ 0.32
TRIM23-203ENST00000381018 TCOF1Q13428 1488 aaKnown RBP17.05■□□□□ 0.32
TRIM23-203ENST00000381018 PPP1R15AO75807 674 aaPredicted RBP17.05■□□□□ 0.32
TRIM23-203ENST00000381018 EPRSP07814 1512 aaKnown RBP17.04■□□□□ 0.32
TRIM23-203ENST00000381018 WDR62O43379 1518 aa17.04■□□□□ 0.32
TRIM23-203ENST00000381018 IFT140Q96RY7 1462 aa17.02■□□□□ 0.32
TRIM23-203ENST00000381018 TONSLQ96HA7 1378 aa17.02■□□□□ 0.31
TRIM23-203ENST00000381018 CDK13Q14004 1512 aaKnown RBP16.99■□□□□ 0.31
TRIM23-203ENST00000381018 AKNAQ7Z591 1439 aa16.98■□□□□ 0.31
TRIM23-203ENST00000381018 MIA2Q96PC5 1412 aa16.97■□□□□ 0.31
TRIM23-203ENST00000381018 DDX10Q13206 875 aaKnown RBP16.97■□□□□ 0.31
TRIM23-203ENST00000381018 KIAA0556O60303 1618 aa16.97■□□□□ 0.31
TRIM23-203ENST00000381018 ZNF608Q9ULD9 1512 aaPredicted RBP16.96■□□□□ 0.31
TRIM23-203ENST00000381018 KIAA0586Q9BVV6 1533 aa16.95■□□□□ 0.3
TRIM23-203ENST00000381018 EIF4G3O43432 1585 aaKnown RBP16.93■□□□□ 0.3
TRIM23-203ENST00000381018 DISP1Q96F81 1524 aa16.91■□□□□ 0.3
TRIM23-203ENST00000381018 KDM5BQ9UGL1 1544 aa16.91■□□□□ 0.3
TRIM23-203ENST00000381018 RAPGEF6Q8TEU7 1601 aa16.91■□□□□ 0.3
TRIM23-203ENST00000381018 KCNH8Q96L42 1107 aa16.9■□□□□ 0.3
TRIM23-203ENST00000381018 RRP7BPQ9NSQ0 103 aa16.9■□□□□ 0.3
TRIM23-203ENST00000381018 KDM6BO15054 1643 aa16.9■□□□□ 0.3
TRIM23-203ENST00000381018 GRIN2AQ12879 1464 aa16.9■□□□□ 0.3
TRIM23-203ENST00000381018 HIRIP3Q9BW71 556 aaPredicted RBP16.88■□□□□ 0.29
TRIM23-203ENST00000381018 CHIC2Q9UKJ5 165 aa16.88■□□□□ 0.29
TRIM23-203ENST00000381018 SENP3Q9H4L4 574 aaPredicted RBP16.88■□□□□ 0.29
TRIM23-203ENST00000381018 SUPT16HQ9Y5B9 1047 aaKnown RBP16.88■□□□□ 0.29
TRIM23-203ENST00000381018 DNMT1P26358 1616 aaKnown RBP16.87■□□□□ 0.29
TRIM23-203ENST00000381018 DENND4BO75064 1496 aaPredicted RBP16.86■□□□□ 0.29
TRIM23-203ENST00000381018 NUP153P49790 1475 aaKnown RBP16.86■□□□□ 0.29
TRIM23-203ENST00000381018 CCER2I3L3R5 266 aa16.85■□□□□ 0.29
TRIM23-203ENST00000381018 ANP32CO43423 234 aa16.84■□□□□ 0.29
TRIM23-203ENST00000381018 ARID3CA6NKF2 412 aa16.84■□□□□ 0.29
TRIM23-203ENST00000381018 TRIM52Q96A61 297 aa16.84■□□□□ 0.29
TRIM23-203ENST00000381018 DAPK1P53355 1430 aa16.84■□□□□ 0.29
TRIM23-203ENST00000381018 MAGI1Q96QZ7 1491 aaPredicted RBP16.83■□□□□ 0.29
TRIM23-203ENST00000381018 ROCK1Q13464 1354 aa16.83■□□□□ 0.28
TRIM23-203ENST00000381018 ITSN2Q9NZM3 1697 aa16.82■□□□□ 0.28
TRIM23-203ENST00000381018 CEP170Q5SW79 1584 aa16.8■□□□□ 0.28
TRIM23-203ENST00000381018 ERCC6Q03468 1493 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms