RNA–Protein interactions for RNA: ENST00000379803.5

SIN3B-202, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIN3B, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-202ENST00000379803 SMARCA2P51531 1590 aa20.96■□□□□ 0.95
SIN3B-202ENST00000379803 TOP2AP11388 1531 aaKnown RBP20.94■□□□□ 0.94
SIN3B-202ENST00000379803 PDS5BQ9NTI5 1447 aa20.93■□□□□ 0.94
SIN3B-202ENST00000379803 ZBTB7CA1YPR0 619 aa20.91■□□□□ 0.94
SIN3B-202ENST00000379803 HDGFP51858 240 aaKnown RBP20.91■□□□□ 0.94
SIN3B-202ENST00000379803 GOLGA3Q08378 1498 aa20.9■□□□□ 0.94
SIN3B-202ENST00000379803 WIZO95785 1651 aa20.9■□□□□ 0.94
SIN3B-202ENST00000379803 CCDC88BA6NC98 1476 aa20.9■□□□□ 0.94
SIN3B-202ENST00000379803 WDR43Q15061 677 aaKnown RBP eCLIP20.89■□□□□ 0.94
SIN3B-202ENST00000379803 RRP7BPQ9NSQ0 103 aa20.86■□□□□ 0.93
SIN3B-202ENST00000379803 SMARCA4P51532 1647 aa20.85■□□□□ 0.93
SIN3B-202ENST00000379803 CDCA8Q53HL2 280 aa20.85■□□□□ 0.93
SIN3B-202ENST00000379803 TMC1Q8TDI8 760 aa20.84■□□□□ 0.93
SIN3B-202ENST00000379803 PLEKHG5O94827 1062 aa20.81■□□□□ 0.92
SIN3B-202ENST00000379803 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.8■□□□□ 0.92
SIN3B-202ENST00000379803 CEP164Q9UPV0 1460 aa20.79■□□□□ 0.92
SIN3B-202ENST00000379803 TNIKQ9UKE5 1360 aa20.78■□□□□ 0.92
SIN3B-202ENST00000379803 CARMIL2Q6F5E8 1435 aa20.77■□□□□ 0.92
SIN3B-202ENST00000379803 CEP162Q5TB80 1403 aa20.77■□□□□ 0.91
SIN3B-202ENST00000379803 KANK1Q14678 1352 aa20.76■□□□□ 0.91
SIN3B-202ENST00000379803 RGL3Q3MIN7 710 aa20.75■□□□□ 0.91
SIN3B-202ENST00000379803 POGKQ9P215 609 aa20.74■□□□□ 0.91
SIN3B-202ENST00000379803 SENP3Q9H4L4 574 aaPredicted RBP20.74■□□□□ 0.91
SIN3B-202ENST00000379803 CFAP53Q96M91 514 aa20.73■□□□□ 0.91
SIN3B-202ENST00000379803 CCNB3Q8WWL7 1395 aa20.72■□□□□ 0.91
SIN3B-202ENST00000379803 EIF4G2P78344 907 aaKnown RBP eCLIP20.71■□□□□ 0.918e-7■■■■■ 30.4
SIN3B-202ENST00000379803 LMOD2Q6P5Q4 547 aa20.71■□□□□ 0.91
SIN3B-202ENST00000379803 UPF2Q9HAU5 1272 aaKnown RBP20.69■□□□□ 0.9
SIN3B-202ENST00000379803 CARMIL1Q5VZK9 1371 aa20.69■□□□□ 0.9
SIN3B-202ENST00000379803 MLECQ14165 292 aa20.69■□□□□ 0.9
SIN3B-202ENST00000379803 FHAD1B1AJZ9 1412 aa20.68■□□□□ 0.9
SIN3B-202ENST00000379803 CUX2O14529 1486 aa20.67■□□□□ 0.9
SIN3B-202ENST00000379803 ATAD2BQ9ULI0 1458 aa20.67■□□□□ 0.9
SIN3B-202ENST00000379803 FAM9BQ8IZU0 186 aa20.67■□□□□ 0.9
SIN3B-202ENST00000379803 MYH16Q9H6N6 1097 aa20.67■□□□□ 0.9
SIN3B-202ENST00000379803 EIF4G1Q04637 1599 aaKnown RBP20.65■□□□□ 0.9
SIN3B-202ENST00000379803 DDX10Q13206 875 aaKnown RBP20.65■□□□□ 0.9
SIN3B-202ENST00000379803 HSP90AA1P07900 732 aaKnown RBP20.63■□□□□ 0.89
SIN3B-202ENST00000379803 ABCC8Q09428 1581 aa20.62■□□□□ 0.89
SIN3B-202ENST00000379803 HNRNPUQ00839 825 aaKnown RBP eCLIP20.62■□□□□ 0.89
SIN3B-202ENST00000379803 SALL2Q9Y467 1007 aaPredicted RBP20.6■□□□□ 0.89
SIN3B-202ENST00000379803 SOGA1O94964 1423 aa20.58■□□□□ 0.89
SIN3B-202ENST00000379803 KNSTRNQ9Y448 316 aa20.58■□□□□ 0.89
SIN3B-202ENST00000379803 MRS2Q9HD23 443 aa20.57■□□□□ 0.88
SIN3B-202ENST00000379803 ARXQ96QS3 562 aa20.57■□□□□ 0.88
SIN3B-202ENST00000379803 EFCAB2Q5VUJ9 269 aa20.57■□□□□ 0.88
SIN3B-202ENST00000379803 ANP32AP39687 249 aaKnown RBP20.56■□□□□ 0.88
SIN3B-202ENST00000379803 NUDCQ9Y266 331 aa20.55■□□□□ 0.88
SIN3B-202ENST00000379803 NPHP1O15259 732 aa20.53■□□□□ 0.88
SIN3B-202ENST00000379803 PPM1GO15355 546 aaPredicted RBP20.52■□□□□ 0.88
SIN3B-202ENST00000379803 CARD11Q9BXL7 1154 aa20.52■□□□□ 0.88
SIN3B-202ENST00000379803 GGT6Q6P531 493 aa20.51■□□□□ 0.87
SIN3B-202ENST00000379803 ANP32EQ9BTT0 268 aa20.47■□□□□ 0.87
SIN3B-202ENST00000379803 MAPK8IP3Q9UPT6 1336 aa20.46■□□□□ 0.87
SIN3B-202ENST00000379803 CADPSQ9ULU8 1353 aa20.46■□□□□ 0.87
SIN3B-202ENST00000379803 TDRD9Q8NDG6 1382 aaKnown RBP20.45■□□□□ 0.86
SIN3B-202ENST00000379803 PNNQ9H307 717 aaKnown RBP20.43■□□□□ 0.86
SIN3B-202ENST00000379803 ANP32BQ92688 251 aaKnown RBP20.41■□□□□ 0.86
SIN3B-202ENST00000379803 OSCARQ8IYS5 282 aa20.4■□□□□ 0.86
SIN3B-202ENST00000379803 EID1Q9Y6B2 187 aa20.38■□□□□ 0.85
SIN3B-202ENST00000379803 SRPK2P78362 688 aaKnown RBP20.35■□□□□ 0.85
SIN3B-202ENST00000379803 CCDC136Q96JN2 1154 aa20.35■□□□□ 0.85
SIN3B-202ENST00000379803 FMN1Q68DA7 1419 aa20.34■□□□□ 0.85
SIN3B-202ENST00000379803 RSPH4AQ5TD94 716 aa20.34■□□□□ 0.85
SIN3B-202ENST00000379803 TMF1P82094 1093 aa20.33■□□□□ 0.84
SIN3B-202ENST00000379803 NCAPD3P42695 1498 aa20.32■□□□□ 0.84
SIN3B-202ENST00000379803 AEBP2Q6ZN18 517 aaPredicted RBP20.32■□□□□ 0.84
SIN3B-202ENST00000379803 EIF5BO60841 1220 aaKnown RBP20.31■□□□□ 0.84
SIN3B-202ENST00000379803 VPS8Q8N3P4 1428 aa20.3■□□□□ 0.84
SIN3B-202ENST00000379803 CHMP4BQ9H444 224 aaKnown RBP20.3■□□□□ 0.84
SIN3B-202ENST00000379803 JPH4Q96JJ6 628 aa20.3■□□□□ 0.84
SIN3B-202ENST00000379803 CDK11BP21127 795 aaKnown RBP20.29■□□□□ 0.84
SIN3B-202ENST00000379803 MIER1Q8N108 512 aa20.28■□□□□ 0.84
SIN3B-202ENST00000379803 DCAF11Q8TEB1 546 aa20.28■□□□□ 0.84
SIN3B-202ENST00000379803 CYB5RLQ6IPT4 315 aa20.27■□□□□ 0.84
SIN3B-202ENST00000379803 HDGFL2Q7Z4V5 671 aaPredicted RBP20.27■□□□□ 0.84
SIN3B-202ENST00000379803 FKBP8Q14318 412 aa20.26■□□□□ 0.83
SIN3B-202ENST00000379803 HIRIP3Q9BW71 556 aaPredicted RBP20.24■□□□□ 0.83
SIN3B-202ENST00000379803 SPAG9O60271 1321 aaKnown RBP20.24■□□□□ 0.83
SIN3B-202ENST00000379803 KIF3BO15066 747 aa20.23■□□□□ 0.83
SIN3B-202ENST00000379803 LAS1LQ9Y4W2 734 aaKnown RBP20.23■□□□□ 0.83
SIN3B-202ENST00000379803 ANKRD30AQ9BXX3 1397 aa20.23■□□□□ 0.83
SIN3B-202ENST00000379803 U2SURPO15042 1029 aaKnown RBP20.23■□□□□ 0.83
SIN3B-202ENST00000379803 CSB-PGBD3P0DP91 1061 aa20.22■□□□□ 0.83
SIN3B-202ENST00000379803 ARHGAP35Q9NRY4 1499 aa20.22■□□□□ 0.83
SIN3B-202ENST00000379803 FTSJ3Q8IY81 847 aaKnown RBP20.21■□□□□ 0.83
SIN3B-202ENST00000379803 GOLGA2Q08379 1002 aa20.21■□□□□ 0.83
SIN3B-202ENST00000379803 MS4A1P11836 297 aa20.2■□□□□ 0.82
SIN3B-202ENST00000379803 STK26Q9P289 416 aa20.2■□□□□ 0.82
SIN3B-202ENST00000379803 WASHC2CQ9Y4E1 1318 aa20.2■□□□□ 0.82
SIN3B-202ENST00000379803 PAK3O75914 559 aaPredicted RBP20.19■□□□□ 0.82
SIN3B-202ENST00000379803 CASC1Q6TDU7 716 aa20.18■□□□□ 0.82
SIN3B-202ENST00000379803 CCDC9Q9Y3X0 531 aaKnown RBP20.18■□□□□ 0.82
SIN3B-202ENST00000379803 SOX12O15370 315 aa20.18■□□□□ 0.82
SIN3B-202ENST00000379803 TNNT2P45379 298 aaPredicted RBP20.17■□□□□ 0.82
SIN3B-202ENST00000379803 SAFB2Q14151 953 aaKnown RBP eCLIP20.17■□□□□ 0.82
SIN3B-202ENST00000379803 NEUROD2Q15784 382 aa20.17■□□□□ 0.82
SIN3B-202ENST00000379803 CHMP4AQ9BY43 222 aa20.17■□□□□ 0.82
SIN3B-202ENST00000379803 PKD2Q13563 968 aa20.16■□□□□ 0.82
SIN3B-202ENST00000379803 TIMELESSQ9UNS1 1208 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms