RNA–Protein interactions for RNA: ENST00000378707.7

DMD-211, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-211ENST00000378707 ISY1Q9ULR0 285 aaKnown RBP9.08□□□□□ -0.96
DMD-211ENST00000378707 GOLGA6L6A8MZA4 724 aa9.06□□□□□ -0.96
DMD-211ENST00000378707 NAP1L2Q9ULW6 460 aaPredicted RBP9.06□□□□□ -0.96
DMD-211ENST00000378707 CALRP27797 417 aaKnown RBP9.06□□□□□ -0.96
DMD-211ENST00000378707 RTN4Q9NQC3 1192 aaKnown RBP9.06□□□□□ -0.96
DMD-211ENST00000378707 HAP1P54257 671 aaPredicted RBP9.06□□□□□ -0.96
DMD-211ENST00000378707 PNNQ9H307 717 aaKnown RBP9.05□□□□□ -0.96
DMD-211ENST00000378707 CCDC136Q96JN2 1154 aa9.04□□□□□ -0.96
DMD-211ENST00000378707 ARID4BQ4LE39 1312 aaPredicted RBP9.04□□□□□ -0.96
DMD-211ENST00000378707 A0A0U1RQG5 324 aaPredicted RBP9.03□□□□□ -0.96
DMD-211ENST00000378707 LOC105371045A0A1W2PR82 267 aa9.03□□□□□ -0.96
DMD-211ENST00000378707 FAM9BQ8IZU0 186 aa9.03□□□□□ -0.96
DMD-211ENST00000378707 TNNT3P45378 269 aaPredicted RBP9.02□□□□□ -0.96
DMD-211ENST00000378707 ARID3AQ99856 593 aa9.02□□□□□ -0.97
DMD-211ENST00000378707 KIAA2012Q0VF49 1180 aa9□□□□□ -0.97
DMD-211ENST00000378707 BECN1Q14457 450 aa9□□□□□ -0.97
DMD-211ENST00000378707 P3H3Q8IVL6 736 aa9□□□□□ -0.97
DMD-211ENST00000378707 NRDCO43847 1150 aa9□□□□□ -0.97
DMD-211ENST00000378707 FGD1P98174 961 aa9□□□□□ -0.97
DMD-211ENST00000378707 GOLGA2Q08379 1002 aa8.99□□□□□ -0.97
DMD-211ENST00000378707 L1TD1Q5T7N2 865 aaKnown RBP8.98□□□□□ -0.97
DMD-211ENST00000378707 DRC7Q8IY82 874 aa8.98□□□□□ -0.97
DMD-211ENST00000378707 HNRNPUQ00839 825 aaKnown RBP eCLIP8.98□□□□□ -0.97
DMD-211ENST00000378707 CHAF1AQ13111 956 aaPredicted RBP8.98□□□□□ -0.97
DMD-211ENST00000378707 WDR43Q15061 677 aaKnown RBP eCLIP8.97□□□□□ -0.97
DMD-211ENST00000378707 PATL2C9JE40 543 aaKnown RBP8.97□□□□□ -0.97
DMD-211ENST00000378707 ANP32EQ9BTT0 268 aa8.97□□□□□ -0.97
DMD-211ENST00000378707 CASC1Q6TDU7 716 aa8.96□□□□□ -0.97
DMD-211ENST00000378707 WWC1Q8IX03 1113 aa8.95□□□□□ -0.98
DMD-211ENST00000378707 PABPN1Q86U42 306 aaKnown RBP eCLIP8.93□□□□□ -0.98
DMD-211ENST00000378707 IRX6P78412 446 aaPredicted RBP8.93□□□□□ -0.98
DMD-211ENST00000378707 KCNJ4P48050 445 aa8.92□□□□□ -0.98
DMD-211ENST00000378707 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.92□□□□□ -0.98
DMD-211ENST00000378707 GOLGA6L4A6NEF3 574 aa8.92□□□□□ -0.98
DMD-211ENST00000378707 TMC1Q8TDI8 760 aa8.92□□□□□ -0.98
DMD-211ENST00000378707 NPM1P06748 294 aaKnown RBP eCLIP8.92□□□□□ -0.98
DMD-211ENST00000378707 DDRGK1Q96HY6 314 aa8.91□□□□□ -0.98
DMD-211ENST00000378707 OS9Q13438 667 aaPredicted RBP8.9□□□□□ -0.99
DMD-211ENST00000378707 LMOD2Q6P5Q4 547 aa8.89□□□□□ -0.99
DMD-211ENST00000378707 GNL2Q13823 731 aaKnown RBP8.89□□□□□ -0.99
DMD-211ENST00000378707 TAF7LQ5H9L4 462 aa8.88□□□□□ -0.99
DMD-211ENST00000378707 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.88□□□□□ -0.99
DMD-211ENST00000378707 GOLGA6L1Q8N7Z2 621 aa8.88□□□□□ -0.99
DMD-211ENST00000378707 CNKSR2Q8WXI2 1034 aa8.88□□□□□ -0.99
DMD-211ENST00000378707 MSNP26038 577 aaKnown RBP8.88□□□□□ -0.99
DMD-211ENST00000378707 LAS1LQ9Y4W2 734 aaKnown RBP8.87□□□□□ -0.99
DMD-211ENST00000378707 HSP90AB1P08238 724 aaKnown RBP8.86□□□□□ -0.99
DMD-211ENST00000378707 APPP05067 770 aa8.86□□□□□ -0.99
DMD-211ENST00000378707 CEP89Q96ST8 783 aa8.86□□□□□ -0.99
DMD-211ENST00000378707 PPM1GO15355 546 aaPredicted RBP8.85□□□□□ -0.99
DMD-211ENST00000378707 CREBRFQ8IUR6 639 aa8.85□□□□□ -0.99
DMD-211ENST00000378707 SETQ01105 290 aaPredicted RBP8.84□□□□□ -0.99
DMD-211ENST00000378707 ACIN1Q9UKV3 1341 aaKnown RBP8.83□□□□□ -1
DMD-211ENST00000378707 SENP3-EIF4A1A0A087X0R7 540 aa8.82□□□□□ -1
DMD-211ENST00000378707 FTSJ3Q8IY81 847 aaKnown RBP8.82□□□□□ -1
DMD-211ENST00000378707 PPP1R15AO75807 674 aaPredicted RBP8.82□□□□□ -1
DMD-211ENST00000378707 RRP12Q5JTH9 1297 aaKnown RBP8.81□□□□□ -1
DMD-211ENST00000378707 KDM2AQ9Y2K7 1162 aa8.81□□□□□ -1
DMD-211ENST00000378707 PTMSP20962 102 aa8.8□□□□□ -1
DMD-211ENST00000378707 SPRYD3Q8NCJ5 442 aa8.8□□□□□ -1
DMD-211ENST00000378707 DDX10Q13206 875 aaKnown RBP8.79□□□□□ -1
DMD-211ENST00000378707 VPS53Q5VIR6 699 aa8.79□□□□□ -1
DMD-211ENST00000378707 RASSF8Q8NHQ8 419 aa8.75□□□□□ -1.01
DMD-211ENST00000378707 MRS2Q9HD23 443 aa8.75□□□□□ -1.01
DMD-211ENST00000378707 HSP90B1P14625 803 aaKnown RBP8.75□□□□□ -1.01
DMD-211ENST00000378707 TMX4Q9H1E5 349 aaPredicted RBP8.75□□□□□ -1.01
DMD-211ENST00000378707 RGS3P49796 1198 aa8.74□□□□□ -1.01
DMD-211ENST00000378707 TRHP20396 242 aaPredicted RBP8.74□□□□□ -1.01
DMD-211ENST00000378707 NEUROD2Q15784 382 aa8.74□□□□□ -1.01
DMD-211ENST00000378707 TONSLQ96HA7 1378 aa8.74□□□□□ -1.01
DMD-211ENST00000378707 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.73□□□□□ -1.012e-9■■■■■ 240.7
DMD-211ENST00000378707 PES1O00541 588 aaKnown RBP8.73□□□□□ -1.01
DMD-211ENST00000378707 CHIC2Q9UKJ5 165 aa8.73□□□□□ -1.01
DMD-211ENST00000378707 G3V3G9 751 aa8.73□□□□□ -1.01
DMD-211ENST00000378707 DCAF8Q5TAQ9 597 aa8.73□□□□□ -1.01
DMD-211ENST00000378707 VSIG10Q8N0Z9 540 aa8.71□□□□□ -1.01
DMD-211ENST00000378707 USP35Q9P2H5 1018 aa8.71□□□□□ -1.01
DMD-211ENST00000378707 TPM4P67936 248 aa8.71□□□□□ -1.01
DMD-211ENST00000378707 ZNF330Q9Y3S2 320 aaPredicted RBP8.71□□□□□ -1.02
DMD-211ENST00000378707 MARCH6O60337 910 aa8.71□□□□□ -1.02
DMD-211ENST00000378707 TPM3P06753 285 aa8.71□□□□□ -1.02
DMD-211ENST00000378707 CCAR2Q8N163 923 aaKnown RBP8.7□□□□□ -1.02
DMD-211ENST00000378707 FRAT1Q92837 279 aaPredicted RBP8.7□□□□□ -1.02
DMD-211ENST00000378707 HSCBQ8IWL3 235 aa8.7□□□□□ -1.02
DMD-211ENST00000378707 AK7Q96M32 723 aa8.7□□□□□ -1.02
DMD-211ENST00000378707 EIF4G2P78344 907 aaKnown RBP eCLIP8.7□□□□□ -1.022e-7■■■□□ 16.3
DMD-211ENST00000378707 SOX12O15370 315 aa8.69□□□□□ -1.02
DMD-211ENST00000378707 MCCP23508 829 aa8.69□□□□□ -1.02
DMD-211ENST00000378707 KCNH8Q96L42 1107 aa8.69□□□□□ -1.02
DMD-211ENST00000378707 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.68□□□□□ -1.02
DMD-211ENST00000378707 CFAP53Q96M91 514 aa8.67□□□□□ -1.02
DMD-211ENST00000378707 GZF1Q9H116 711 aaPredicted RBP8.67□□□□□ -1.02
DMD-211ENST00000378707 MEX3CQ5U5Q3 659 aaKnown RBP8.67□□□□□ -1.02
DMD-211ENST00000378707 APBB1O00213 710 aa8.67□□□□□ -1.02
DMD-211ENST00000378707 CCDC9Q9Y3X0 531 aaKnown RBP8.66□□□□□ -1.02
DMD-211ENST00000378707 MAPK8IP3Q9UPT6 1336 aa8.66□□□□□ -1.02
DMD-211ENST00000378707 PLCD4Q9BRC7 762 aa8.66□□□□□ -1.02
DMD-211ENST00000378707 TCEAL9Q9UHQ7 104 aa8.65□□□□□ -1.02
DMD-211ENST00000378707 KIAA1211Q6ZU35 1233 aa8.65□□□□□ -1.03
DMD-211ENST00000378707 PAF1Q8N7H5 531 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms