RNA–Protein interactions for RNA: ENST00000378633.5

CDK11A-205, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best) BASIC

Gene CDK11A, Length 2,458 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-205ENST00000378633 NESP48681 1621 aa27.53■■■□□ 2
CDK11A-205ENST00000378633 GTF3C3Q9Y5Q9 886 aa27.5■■□□□ 1.99
CDK11A-205ENST00000378633 PCF11O94913 1555 aaKnown RBP27.45■■□□□ 1.99
CDK11A-205ENST00000378633 ITGAEP38570 1179 aa27.45■■□□□ 1.99
CDK11A-205ENST00000378633 CFAP43Q8NDM7 1665 aa27.45■■□□□ 1.98
CDK11A-205ENST00000378633 CUL7Q14999 1698 aa27.45■■□□□ 1.98
CDK11A-205ENST00000378633 PHLDB1Q86UU1 1377 aa27.42■■□□□ 1.98
CDK11A-205ENST00000378633 PELP1Q8IZL8 1130 aaKnown RBP27.41■■□□□ 1.98
CDK11A-205ENST00000378633 EFCAB5A4FU69 1503 aa27.41■■□□□ 1.98
CDK11A-205ENST00000378633 P3H3Q8IVL6 736 aa27.41■■□□□ 1.98
CDK11A-205ENST00000378633 LAMC3Q9Y6N6 1575 aa27.4■■□□□ 1.98
CDK11A-205ENST00000378633 RAB3GAP2Q9H2M9 1393 aa27.4■■□□□ 1.98
CDK11A-205ENST00000378633 FHOD3Q2V2M9 1422 aa27.38■■□□□ 1.97
CDK11A-205ENST00000378633 YTHDC1Q96MU7 727 aaKnown RBP27.38■■□□□ 1.97
CDK11A-205ENST00000378633 URB2Q14146 1524 aaKnown RBP27.36■■□□□ 1.97
CDK11A-205ENST00000378633 FYCO1Q9BQS8 1478 aa27.35■■□□□ 1.97
CDK11A-205ENST00000378633 WDR97A6NE52 1622 aa27.35■■□□□ 1.97
CDK11A-205ENST00000378633 CTTNBP2Q8WZ74 1663 aa27.35■■□□□ 1.97
CDK11A-205ENST00000378633 AQRO60306 1485 aaKnown RBP eCLIP27.33■■□□□ 1.973e-7■■■□□ 15.1
CDK11A-205ENST00000378633 CASKIN1Q8WXD9 1431 aa27.32■■□□□ 1.96
CDK11A-205ENST00000378633 SETD5Q9C0A6 1442 aa27.32■■□□□ 1.96
CDK11A-205ENST00000378633 MAPKBP1O60336 1514 aa27.3■■□□□ 1.96
CDK11A-205ENST00000378633 ATP1B4Q9UN42 357 aaPredicted RBP27.28■■□□□ 1.96
CDK11A-205ENST00000378633 FAM50AQ14320 339 aaKnown RBP27.26■■□□□ 1.95
CDK11A-205ENST00000378633 ABCA5Q8WWZ7 1642 aa27.25■■□□□ 1.95
CDK11A-205ENST00000378633 FMN1Q68DA7 1419 aa27.23■■□□□ 1.95
CDK11A-205ENST00000378633 PDS5BQ9NTI5 1447 aa27.21■■□□□ 1.95
CDK11A-205ENST00000378633 TDRD9Q8NDG6 1382 aaKnown RBP27.2■■□□□ 1.95
CDK11A-205ENST00000378633 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.19■■□□□ 1.94
CDK11A-205ENST00000378633 GAPVD1Q14C86 1478 aa27.19■■□□□ 1.94
CDK11A-205ENST00000378633 SNAPC4Q5SXM2 1469 aa27.18■■□□□ 1.94
CDK11A-205ENST00000378633 SAMD9Q5K651 1589 aa27.15■■□□□ 1.94
CDK11A-205ENST00000378633 DNAJC5BQ9UF47 199 aa27.09■■□□□ 1.93
CDK11A-205ENST00000378633 KIF21AQ7Z4S6 1674 aa27.08■■□□□ 1.93
CDK11A-205ENST00000378633 FGD6Q6ZV73 1430 aa27.07■■□□□ 1.92
CDK11A-205ENST00000378633 MTUS2Q5JR59 1369 aa27.04■■□□□ 1.92
CDK11A-205ENST00000378633 TARBP1Q13395 1621 aaKnown RBP27.04■■□□□ 1.92
CDK11A-205ENST00000378633 GRIN2BQ13224 1484 aa27.03■■□□□ 1.92
CDK11A-205ENST00000378633 SIN3AQ96ST3 1273 aa27.02■■□□□ 1.92
CDK11A-205ENST00000378633 LRRIQ1Q96JM4 1722 aa27.02■■□□□ 1.92
CDK11A-205ENST00000378633 THOC2Q8NI27 1593 aaKnown RBP27.01■■□□□ 1.91
CDK11A-205ENST00000378633 TIMELESSQ9UNS1 1208 aa26.99■■□□□ 1.91
CDK11A-205ENST00000378633 NCOA2Q15596 1464 aa26.94■■□□□ 1.9
CDK11A-205ENST00000378633 MYOM3Q5VTT5 1437 aa26.92■■□□□ 1.9
CDK11A-205ENST00000378633 PTPRKQ15262 1439 aa26.91■■□□□ 1.9
CDK11A-205ENST00000378633 EHBP1L1Q8N3D4 1523 aa26.91■■□□□ 1.9
CDK11A-205ENST00000378633 HFM1A2PYH4 1435 aa26.9■■□□□ 1.9
CDK11A-205ENST00000378633 SUPT6HQ7KZ85 1726 aaKnown RBP26.9■■□□□ 1.9
CDK11A-205ENST00000378633 PBRM1Q86U86 1689 aa26.89■■□□□ 1.89
CDK11A-205ENST00000378633 CCDC18Q5T9S5 1454 aa26.88■■□□□ 1.89
CDK11A-205ENST00000378633 PTPN23Q9H3S7 1636 aa26.85■■□□□ 1.89
CDK11A-205ENST00000378633 ARHGEF11O15085 1522 aa26.84■■□□□ 1.89
CDK11A-205ENST00000378633 UGGT2Q9NYU1 1516 aa26.84■■□□□ 1.89
CDK11A-205ENST00000378633 PPP1R15AO75807 674 aaPredicted RBP26.83■■□□□ 1.89
CDK11A-205ENST00000378633 UACAQ9BZF9 1416 aa26.83■■□□□ 1.88
CDK11A-205ENST00000378633 MAGI3Q5TCQ9 1506 aa26.82■■□□□ 1.88
CDK11A-205ENST00000378633 ADAMTS12P58397 1594 aa26.81■■□□□ 1.88
CDK11A-205ENST00000378633 IQGAP2Q13576 1575 aa26.81■■□□□ 1.88
CDK11A-205ENST00000378633 NAIPQ13075 1403 aa26.81■■□□□ 1.88
CDK11A-205ENST00000378633 MRC2Q9UBG0 1479 aa26.8■■□□□ 1.88
CDK11A-205ENST00000378633 HECW1Q76N89 1606 aa26.78■■□□□ 1.88
CDK11A-205ENST00000378633 TCOF1Q13428 1488 aaKnown RBP26.73■■□□□ 1.87
CDK11A-205ENST00000378633 DDX10Q13206 875 aaKnown RBP26.72■■□□□ 1.87
CDK11A-205ENST00000378633 EPRSP07814 1512 aaKnown RBP26.72■■□□□ 1.87
CDK11A-205ENST00000378633 TONSLQ96HA7 1378 aa26.71■■□□□ 1.87
CDK11A-205ENST00000378633 KCNH8Q96L42 1107 aa26.67■■□□□ 1.86
CDK11A-205ENST00000378633 WDR62O43379 1518 aa26.66■■□□□ 1.86
CDK11A-205ENST00000378633 IFT140Q96RY7 1462 aa26.65■■□□□ 1.86
CDK11A-205ENST00000378633 CDK13Q14004 1512 aaKnown RBP26.64■■□□□ 1.85
CDK11A-205ENST00000378633 MIA2Q96PC5 1412 aa26.62■■□□□ 1.85
CDK11A-205ENST00000378633 ZNF608Q9ULD9 1512 aaPredicted RBP26.62■■□□□ 1.85
CDK11A-205ENST00000378633 GCC2Q8IWJ2 1684 aa26.61■■□□□ 1.85
CDK11A-205ENST00000378633 HIRIP3Q9BW71 556 aaPredicted RBP26.61■■□□□ 1.85
CDK11A-205ENST00000378633 AKNAQ7Z591 1439 aa26.61■■□□□ 1.85
CDK11A-205ENST00000378633 RRP7BPQ9NSQ0 103 aa26.59■■□□□ 1.85
CDK11A-205ENST00000378633 SUPT16HQ9Y5B9 1047 aaKnown RBP26.58■■□□□ 1.85
CDK11A-205ENST00000378633 CHIC2Q9UKJ5 165 aa26.57■■□□□ 1.84
CDK11A-205ENST00000378633 KDM5BQ9UGL1 1544 aa26.56■■□□□ 1.84
CDK11A-205ENST00000378633 KIAA0586Q9BVV6 1533 aa26.56■■□□□ 1.84
CDK11A-205ENST00000378633 KIAA0556O60303 1618 aa26.53■■□□□ 1.84
CDK11A-205ENST00000378633 DISP1Q96F81 1524 aa26.53■■□□□ 1.84
CDK11A-205ENST00000378633 DENND4BO75064 1496 aaPredicted RBP26.52■■□□□ 1.84
CDK11A-205ENST00000378633 ARID3CA6NKF2 412 aa26.5■■□□□ 1.83
CDK11A-205ENST00000378633 KDM6BO15054 1643 aa26.5■■□□□ 1.83
CDK11A-205ENST00000378633 CCER2I3L3R5 266 aa26.48■■□□□ 1.83
CDK11A-205ENST00000378633 GRIN2AQ12879 1464 aa26.47■■□□□ 1.83
CDK11A-205ENST00000378633 ANP32CO43423 234 aa26.46■■□□□ 1.83
CDK11A-205ENST00000378633 TRIM52Q96A61 297 aa26.46■■□□□ 1.83
CDK11A-205ENST00000378633 NUP153P49790 1475 aaKnown RBP26.45■■□□□ 1.82
CDK11A-205ENST00000378633 EIF4G3O43432 1585 aaKnown RBP26.44■■□□□ 1.82
CDK11A-205ENST00000378633 RAPGEF6Q8TEU7 1601 aa26.42■■□□□ 1.82
CDK11A-205ENST00000378633 MPHOSPH9Q99550 1183 aa26.41■■□□□ 1.82
CDK11A-205ENST00000378633 DAPK1P53355 1430 aa26.41■■□□□ 1.82
CDK11A-205ENST00000378633 ROCK1Q13464 1354 aa26.4■■□□□ 1.82
CDK11A-205ENST00000378633 DNMT1P26358 1616 aaKnown RBP26.37■■□□□ 1.81
CDK11A-205ENST00000378633 ABCC5O15440 1437 aa26.36■■□□□ 1.81
CDK11A-205ENST00000378633 CDK11AQ9UQ88 783 aaPredicted RBP26.34■■□□□ 1.81
CDK11A-205ENST00000378633 MAGI1Q96QZ7 1491 aaPredicted RBP26.34■■□□□ 1.81
CDK11A-205ENST00000378633 ZNF644Q9H582 1327 aaPredicted RBP26.31■■□□□ 1.8
CDK11A-205ENST00000378633 HSPA5P11021 654 aaKnown RBP26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms