RNA–Protein interactions for RNA: ENST00000378251.2

LRRC47-201, Transcript of leucine rich repeat containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC47, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-201ENST00000378251 ZNF316A6NFI3 1004 aaPredicted RBP22.56■■□□□ 1.2
LRRC47-201ENST00000378251 TONSLQ96HA7 1378 aa22.54■■□□□ 1.2
LRRC47-201ENST00000378251 SENP3Q9H4L4 574 aaPredicted RBP22.53■■□□□ 1.2
LRRC47-201ENST00000378251 STAG3Q9UJ98 1225 aa22.53■■□□□ 1.2
LRRC47-201ENST00000378251 GTF3C3Q9Y5Q9 886 aa22.53■■□□□ 1.2
LRRC47-201ENST00000378251 KANK4Q5T7N3 995 aaPredicted RBP22.52■■□□□ 1.2
LRRC47-201ENST00000378251 KDM2AQ9Y2K7 1162 aa22.5■■□□□ 1.19
LRRC47-201ENST00000378251 NESP48681 1621 aa22.48■■□□□ 1.19
LRRC47-201ENST00000378251 BICRAQ9NZM4 1560 aa22.48■■□□□ 1.19
LRRC47-201ENST00000378251 RAPGEF2Q9Y4G8 1499 aa22.47■■□□□ 1.19
LRRC47-201ENST00000378251 RAD54L2Q9Y4B4 1467 aa22.44■■□□□ 1.18
LRRC47-201ENST00000378251 JPH4Q96JJ6 628 aa22.44■■□□□ 1.18
LRRC47-201ENST00000378251 FHAD1B1AJZ9 1412 aa22.44■■□□□ 1.18
LRRC47-201ENST00000378251 CC2D2AQ9P2K1 1620 aa22.43■■□□□ 1.18
LRRC47-201ENST00000378251 HIRIP3Q9BW71 556 aaPredicted RBP22.43■■□□□ 1.18
LRRC47-201ENST00000378251 ANP32CO43423 234 aa22.41■■□□□ 1.18
LRRC47-201ENST00000378251 FGD5Q6ZNL6 1462 aa22.39■■□□□ 1.17
LRRC47-201ENST00000378251 VPS8Q8N3P4 1428 aa22.38■■□□□ 1.17
LRRC47-201ENST00000378251 RGL3Q3MIN7 710 aa22.36■■□□□ 1.17
LRRC47-201ENST00000378251 FHOD3Q2V2M9 1422 aa22.35■■□□□ 1.17
LRRC47-201ENST00000378251 TRHP20396 242 aaPredicted RBP22.34■■□□□ 1.17
LRRC47-201ENST00000378251 CCNB3Q8WWL7 1395 aa22.34■■□□□ 1.17
LRRC47-201ENST00000378251 CARMIL2Q6F5E8 1435 aa22.33■■□□□ 1.17
LRRC47-201ENST00000378251 IGF1RP08069 1367 aa22.33■■□□□ 1.16
LRRC47-201ENST00000378251 ACIN1Q9UKV3 1341 aaKnown RBP22.32■■□□□ 1.16
LRRC47-201ENST00000378251 DDX10Q13206 875 aaKnown RBP22.32■■□□□ 1.16
LRRC47-201ENST00000378251 AQRO60306 1485 aaKnown RBP eCLIP22.3■■□□□ 1.165e-6■■□□□ 14.3
LRRC47-201ENST00000378251 ARID4BQ4LE39 1312 aaPredicted RBP22.29■■□□□ 1.16
LRRC47-201ENST00000378251 CFTRP13569 1480 aa22.28■■□□□ 1.16
LRRC47-201ENST00000378251 SIN3AQ96ST3 1273 aa22.26■■□□□ 1.15
LRRC47-201ENST00000378251 GAPVD1Q14C86 1478 aa22.24■■□□□ 1.15
LRRC47-201ENST00000378251 FMN1Q68DA7 1419 aa22.2■■□□□ 1.15
LRRC47-201ENST00000378251 CYB5RLQ6IPT4 315 aa22.19■■□□□ 1.14
LRRC47-201ENST00000378251 SCAF1Q9H7N4 1312 aaKnown RBP22.17■■□□□ 1.14
LRRC47-201ENST00000378251 MLECQ14165 292 aa22.17■■□□□ 1.14
LRRC47-201ENST00000378251 OSCARQ8IYS5 282 aa22.14■■□□□ 1.13
LRRC47-201ENST00000378251 HMGXB3Q12766 1538 aa22.14■■□□□ 1.13
LRRC47-201ENST00000378251 FOXD1Q16676 465 aa22.08■■□□□ 1.13
LRRC47-201ENST00000378251 GGT6Q6P531 493 aa22.08■■□□□ 1.13
LRRC47-201ENST00000378251 SYNJ1O43426 1573 aa22.08■■□□□ 1.12
LRRC47-201ENST00000378251 ARHGAP35Q9NRY4 1499 aa22.07■■□□□ 1.12
LRRC47-201ENST00000378251 HNRNPMP52272 730 aaKnown RBP eCLIP22.06■■□□□ 1.125e-11■■■■■ 37.4
LRRC47-201ENST00000378251 PPP1R15AO75807 674 aaPredicted RBP22.06■■□□□ 1.12
LRRC47-201ENST00000378251 EFCAB2Q5VUJ9 269 aa22.06■■□□□ 1.12
LRRC47-201ENST00000378251 PTPRGP23470 1445 aa22.05■■□□□ 1.12
LRRC47-201ENST00000378251 UNC13AQ9UPW8 1703 aa22.04■■□□□ 1.12
LRRC47-201ENST00000378251 SLC24A1O60721 1099 aa22.03■■□□□ 1.12
LRRC47-201ENST00000378251 EIF4G2P78344 907 aaKnown RBP eCLIP22.03■■□□□ 1.12
LRRC47-201ENST00000378251 TOPBP1Q92547 1522 aa22■■□□□ 1.11
LRRC47-201ENST00000378251 SALL2Q9Y467 1007 aaPredicted RBP21.99■■□□□ 1.11
LRRC47-201ENST00000378251 CUX1P39880 1505 aa21.98■■□□□ 1.11
LRRC47-201ENST00000378251 POLA1P09884 1462 aaPredicted RBP21.98■■□□□ 1.11
LRRC47-201ENST00000378251 FAM9BQ8IZU0 186 aa21.98■■□□□ 1.11
LRRC47-201ENST00000378251 PLEKHG5O94827 1062 aa21.97■■□□□ 1.11
LRRC47-201ENST00000378251 MRC2Q9UBG0 1479 aa21.95■■□□□ 1.1
LRRC47-201ENST00000378251 PKD2Q13563 968 aa21.94■■□□□ 1.1
LRRC47-201ENST00000378251 CARD11Q9BXL7 1154 aa21.91■■□□□ 1.1
LRRC47-201ENST00000378251 DCAF11Q8TEB1 546 aa21.91■■□□□ 1.1
LRRC47-201ENST00000378251 SETD5Q9C0A6 1442 aa21.91■■□□□ 1.1
LRRC47-201ENST00000378251 GRIN2BQ13224 1484 aa21.9■■□□□ 1.1
LRRC47-201ENST00000378251 MIER1Q8N108 512 aa21.89■■□□□ 1.1
LRRC47-201ENST00000378251 TMC1Q8TDI8 760 aa21.89■■□□□ 1.09
LRRC47-201ENST00000378251 KIF3BO15066 747 aa21.89■■□□□ 1.09
LRRC47-201ENST00000378251 NEFMP07197 916 aa21.89■■□□□ 1.09
LRRC47-201ENST00000378251 RAB3GAP2Q9H2M9 1393 aa21.89■■□□□ 1.09
LRRC47-201ENST00000378251 HNRNPUQ00839 825 aaKnown RBP eCLIP21.87■■□□□ 1.09
LRRC47-201ENST00000378251 NUP155O75694 1391 aa21.85■■□□□ 1.09
LRRC47-201ENST00000378251 SENP3-EIF4A1A0A087X0R7 540 aa21.84■■□□□ 1.09
LRRC47-201ENST00000378251 C14orf37Q86TY3 774 aa21.83■■□□□ 1.09
LRRC47-201ENST00000378251 MPHOSPH9Q99550 1183 aa21.83■■□□□ 1.09
LRRC47-201ENST00000378251 BCL11AQ9H165 835 aa21.83■■□□□ 1.09
LRRC47-201ENST00000378251 CCDC18Q5T9S5 1454 aa21.83■■□□□ 1.08
LRRC47-201ENST00000378251 SPAG9O60271 1321 aaKnown RBP21.82■■□□□ 1.08
LRRC47-201ENST00000378251 ZNF644Q9H582 1327 aaPredicted RBP21.82■■□□□ 1.08
LRRC47-201ENST00000378251 MRS2Q9HD23 443 aa21.82■■□□□ 1.08
LRRC47-201ENST00000378251 TOP2BQ02880 1626 aa21.8■■□□□ 1.08
LRRC47-201ENST00000378251 CLSPNQ9HAW4 1339 aa21.78■■□□□ 1.08
LRRC47-201ENST00000378251 IFT140Q96RY7 1462 aa21.78■■□□□ 1.08
LRRC47-201ENST00000378251 ANKRD30AQ9BXX3 1397 aa21.78■■□□□ 1.08
LRRC47-201ENST00000378251 KANK1Q14678 1352 aa21.77■■□□□ 1.08
LRRC47-201ENST00000378251 PRXQ9BXM0 1461 aa21.75■■□□□ 1.07
LRRC47-201ENST00000378251 ARAP1Q96P48 1450 aa21.73■■□□□ 1.07
LRRC47-201ENST00000378251 SAFB2Q14151 953 aaKnown RBP eCLIP21.73■■□□□ 1.07
LRRC47-201ENST00000378251 SNAPC4Q5SXM2 1469 aa21.73■■□□□ 1.07
LRRC47-201ENST00000378251 PEG3Q9GZU2 1588 aa21.73■■□□□ 1.07
LRRC47-201ENST00000378251 CANXP27824 592 aaKnown RBP21.72■■□□□ 1.07
LRRC47-201ENST00000378251 DNMBPQ6XZF7 1577 aa21.72■■□□□ 1.07
LRRC47-201ENST00000378251 PRG4Q92954 1404 aaPredicted RBP21.71■■□□□ 1.07
LRRC47-201ENST00000378251 KIF21BO75037 1637 aa21.71■■□□□ 1.07
LRRC47-201ENST00000378251 LAMC3Q9Y6N6 1575 aa21.71■■□□□ 1.07
LRRC47-201ENST00000378251 POGKQ9P215 609 aa21.71■■□□□ 1.07
LRRC47-201ENST00000378251 FAM69CQ0P6D2 419 aa21.7■■□□□ 1.06
LRRC47-201ENST00000378251 RSPH4AQ5TD94 716 aa21.68■■□□□ 1.06
LRRC47-201ENST00000378251 ZBTB7CA1YPR0 619 aa21.67■■□□□ 1.06
LRRC47-201ENST00000378251 NUTM2DQ5VT03 806 aaPredicted RBP21.66■■□□□ 1.06
LRRC47-201ENST00000378251 WASHC2CQ9Y4E1 1318 aa21.66■■□□□ 1.06
LRRC47-201ENST00000378251 STK26Q9P289 416 aa21.65■■□□□ 1.06
LRRC47-201ENST00000378251 URB2Q14146 1524 aaKnown RBP21.64■■□□□ 1.06
LRRC47-201ENST00000378251 PHLDB1Q86UU1 1377 aa21.64■■□□□ 1.05
LRRC47-201ENST00000378251 WDR43Q15061 677 aaKnown RBP eCLIP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms