RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 TOPBP1Q92547 1522 aa16.06■□□□□ 0.16
BEST1-201ENST00000378043 NESP48681 1621 aa16.06■□□□□ 0.16
BEST1-201ENST00000378043 POLA1P09884 1462 aaPredicted RBP16.06■□□□□ 0.16
BEST1-201ENST00000378043 ITGAEP38570 1179 aa16.05■□□□□ 0.16
BEST1-201ENST00000378043 PCF11O94913 1555 aaKnown RBP16.03■□□□□ 0.16
BEST1-201ENST00000378043 PHLDB1Q86UU1 1377 aa16.03■□□□□ 0.16
BEST1-201ENST00000378043 CFAP43Q8NDM7 1665 aa16.03■□□□□ 0.16
BEST1-201ENST00000378043 FHAD1B1AJZ9 1412 aa16.02■□□□□ 0.16
BEST1-201ENST00000378043 RAB3GAP2Q9H2M9 1393 aa16.02■□□□□ 0.15
BEST1-201ENST00000378043 P3H3Q8IVL6 736 aa16.01■□□□□ 0.15
BEST1-201ENST00000378043 MAPKBP1O60336 1514 aa15.99■□□□□ 0.15
BEST1-201ENST00000378043 FHOD3Q2V2M9 1422 aa15.98■□□□□ 0.15
BEST1-201ENST00000378043 CUL7Q14999 1698 aa15.97■□□□□ 0.15
BEST1-201ENST00000378043 CTTNBP2Q8WZ74 1663 aa15.96■□□□□ 0.15
BEST1-201ENST00000378043 EFCAB5A4FU69 1503 aa15.95■□□□□ 0.14
BEST1-201ENST00000378043 WDR97A6NE52 1622 aa15.95■□□□□ 0.14
BEST1-201ENST00000378043 SETD5Q9C0A6 1442 aa15.95■□□□□ 0.14
BEST1-201ENST00000378043 URB2Q14146 1524 aaKnown RBP15.94■□□□□ 0.14
BEST1-201ENST00000378043 FYCO1Q9BQS8 1478 aa15.94■□□□□ 0.14
BEST1-201ENST00000378043 CASKIN1Q8WXD9 1431 aa15.93■□□□□ 0.14
BEST1-201ENST00000378043 LAMC3Q9Y6N6 1575 aa15.92■□□□□ 0.14
BEST1-201ENST00000378043 AQRO60306 1485 aaKnown RBP eCLIP15.92■□□□□ 0.14
BEST1-201ENST00000378043 ATP1B4Q9UN42 357 aaPredicted RBP15.91■□□□□ 0.14
BEST1-201ENST00000378043 FAM50AQ14320 339 aaKnown RBP15.9■□□□□ 0.14
BEST1-201ENST00000378043 ABCA5Q8WWZ7 1642 aa15.88■□□□□ 0.13
BEST1-201ENST00000378043 SNAPC4Q5SXM2 1469 aa15.87■□□□□ 0.13
BEST1-201ENST00000378043 TDRD9Q8NDG6 1382 aaKnown RBP15.86■□□□□ 0.13
BEST1-201ENST00000378043 FMN1Q68DA7 1419 aa15.85■□□□□ 0.13
BEST1-201ENST00000378043 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.84■□□□□ 0.13
BEST1-201ENST00000378043 LRRIQ1Q96JM4 1722 aa15.84■□□□□ 0.13
BEST1-201ENST00000378043 DNAJC5BQ9UF47 199 aa15.84■□□□□ 0.13
BEST1-201ENST00000378043 SAMD9Q5K651 1589 aa15.84■□□□□ 0.13
BEST1-201ENST00000378043 SIN3AQ96ST3 1273 aa15.83■□□□□ 0.12
BEST1-201ENST00000378043 GAPVD1Q14C86 1478 aa15.82■□□□□ 0.12
BEST1-201ENST00000378043 FGD6Q6ZV73 1430 aa15.8■□□□□ 0.12
BEST1-201ENST00000378043 KIF21AQ7Z4S6 1674 aa15.8■□□□□ 0.12
BEST1-201ENST00000378043 PDS5BQ9NTI5 1447 aa15.79■□□□□ 0.12
BEST1-201ENST00000378043 GRIN2BQ13224 1484 aa15.77■□□□□ 0.11
BEST1-201ENST00000378043 TARBP1Q13395 1621 aaKnown RBP15.76■□□□□ 0.11
BEST1-201ENST00000378043 MTUS2Q5JR59 1369 aa15.75■□□□□ 0.11
BEST1-201ENST00000378043 PTPRKQ15262 1439 aa15.75■□□□□ 0.11
BEST1-201ENST00000378043 TIMELESSQ9UNS1 1208 aa15.73■□□□□ 0.11
BEST1-201ENST00000378043 NCOA2Q15596 1464 aa15.72■□□□□ 0.11
BEST1-201ENST00000378043 THOC2Q8NI27 1593 aaKnown RBP15.72■□□□□ 0.11
BEST1-201ENST00000378043 HFM1A2PYH4 1435 aa15.7■□□□□ 0.1
BEST1-201ENST00000378043 CCDC18Q5T9S5 1454 aa15.7■□□□□ 0.1
BEST1-201ENST00000378043 MYOM3Q5VTT5 1437 aa15.7■□□□□ 0.1
BEST1-201ENST00000378043 KCNH8Q96L42 1107 aa15.7■□□□□ 0.1
BEST1-201ENST00000378043 PPP1R15AO75807 674 aaPredicted RBP15.69■□□□□ 0.1
BEST1-201ENST00000378043 PTPN23Q9H3S7 1636 aa15.69■□□□□ 0.1
BEST1-201ENST00000378043 SUPT6HQ7KZ85 1726 aaKnown RBP15.69■□□□□ 0.1
BEST1-201ENST00000378043 MAGI3Q5TCQ9 1506 aa15.69■□□□□ 0.1
BEST1-201ENST00000378043 PBRM1Q86U86 1689 aa15.67■□□□□ 0.1
BEST1-201ENST00000378043 EHBP1L1Q8N3D4 1523 aa15.67■□□□□ 0.1
BEST1-201ENST00000378043 ARHGEF11O15085 1522 aa15.67■□□□□ 0.1
BEST1-201ENST00000378043 NAIPQ13075 1403 aa15.67■□□□□ 0.1
BEST1-201ENST00000378043 UACAQ9BZF9 1416 aa15.66■□□□□ 0.1
BEST1-201ENST00000378043 UGGT2Q9NYU1 1516 aa15.66■□□□□ 0.1
BEST1-201ENST00000378043 DDX10Q13206 875 aaKnown RBP15.66■□□□□ 0.1
BEST1-201ENST00000378043 HIRIP3Q9BW71 556 aaPredicted RBP15.62■□□□□ 0.09
BEST1-201ENST00000378043 ADAMTS12P58397 1594 aa15.61■□□□□ 0.09
BEST1-201ENST00000378043 IQGAP2Q13576 1575 aa15.61■□□□□ 0.09
BEST1-201ENST00000378043 SUPT16HQ9Y5B9 1047 aaKnown RBP15.61■□□□□ 0.09
BEST1-201ENST00000378043 HECW1Q76N89 1606 aa15.59■□□□□ 0.09
BEST1-201ENST00000378043 TONSLQ96HA7 1378 aa15.58■□□□□ 0.09
BEST1-201ENST00000378043 EPRSP07814 1512 aaKnown RBP15.58■□□□□ 0.08
BEST1-201ENST00000378043 TCOF1Q13428 1488 aaKnown RBP15.58■□□□□ 0.08
BEST1-201ENST00000378043 KDM5BQ9UGL1 1544 aa15.57■□□□□ 0.08
BEST1-201ENST00000378043 MRC2Q9UBG0 1479 aa15.56■□□□□ 0.08
BEST1-201ENST00000378043 CDK13Q14004 1512 aaKnown RBP15.56■□□□□ 0.08
BEST1-201ENST00000378043 GCC2Q8IWJ2 1684 aa15.55■□□□□ 0.08
BEST1-201ENST00000378043 DENND4BO75064 1496 aaPredicted RBP15.55■□□□□ 0.08
BEST1-201ENST00000378043 WDR62O43379 1518 aa15.55■□□□□ 0.08
BEST1-201ENST00000378043 RRP7BPQ9NSQ0 103 aa15.53■□□□□ 0.08
BEST1-201ENST00000378043 KDM6BO15054 1643 aa15.53■□□□□ 0.08
BEST1-201ENST00000378043 CHIC2Q9UKJ5 165 aa15.52■□□□□ 0.08
BEST1-201ENST00000378043 ZNF608Q9ULD9 1512 aaPredicted RBP15.52■□□□□ 0.08
BEST1-201ENST00000378043 AKNAQ7Z591 1439 aa15.5■□□□□ 0.07
BEST1-201ENST00000378043 MIA2Q96PC5 1412 aa15.5■□□□□ 0.07
BEST1-201ENST00000378043 ARID3CA6NKF2 412 aa15.49■□□□□ 0.07
BEST1-201ENST00000378043 CCER2I3L3R5 266 aa15.47■□□□□ 0.07
BEST1-201ENST00000378043 DISP1Q96F81 1524 aa15.47■□□□□ 0.07
BEST1-201ENST00000378043 IFT140Q96RY7 1462 aa15.47■□□□□ 0.07
BEST1-201ENST00000378043 KIAA0556O60303 1618 aa15.46■□□□□ 0.06
BEST1-201ENST00000378043 ANP32CO43423 234 aa15.45■□□□□ 0.06
BEST1-201ENST00000378043 KIAA0586Q9BVV6 1533 aa15.45■□□□□ 0.06
BEST1-201ENST00000378043 NUP153P49790 1475 aaKnown RBP15.43■□□□□ 0.06
BEST1-201ENST00000378043 TRIM52Q96A61 297 aa15.43■□□□□ 0.06
BEST1-201ENST00000378043 MPHOSPH9Q99550 1183 aa15.42■□□□□ 0.06
BEST1-201ENST00000378043 GRIN2AQ12879 1464 aa15.4■□□□□ 0.06
BEST1-201ENST00000378043 EIF4G3O43432 1585 aaKnown RBP15.4■□□□□ 0.06
BEST1-201ENST00000378043 DAPK1P53355 1430 aa15.4■□□□□ 0.06
BEST1-201ENST00000378043 DNMT1P26358 1616 aaKnown RBP15.39■□□□□ 0.05
BEST1-201ENST00000378043 RAPGEF6Q8TEU7 1601 aa15.39■□□□□ 0.05
BEST1-201ENST00000378043 ABCC5O15440 1437 aa15.39■□□□□ 0.05
BEST1-201ENST00000378043 ZNF644Q9H582 1327 aaPredicted RBP15.38■□□□□ 0.05
BEST1-201ENST00000378043 FOXD1Q16676 465 aa15.38■□□□□ 0.05
BEST1-201ENST00000378043 ROCK1Q13464 1354 aa15.38■□□□□ 0.05
BEST1-201ENST00000378043 WASHC2AQ641Q2 1341 aa15.37■□□□□ 0.05
BEST1-201ENST00000378043 HSPA5P11021 654 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms