RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 RAB3GAP2Q9H2M9 1393 aa26.28■■□□□ 1.8
SF1-203ENST00000377387 PRDM2Q13029 1718 aa26.23■■□□□ 1.79
SF1-203ENST00000377387 SIN3AQ96ST3 1273 aa26.2■■□□□ 1.78
SF1-203ENST00000377387 PHLDB1Q86UU1 1377 aa26.19■■□□□ 1.78
SF1-203ENST00000377387 TIAM1Q13009 1591 aa26.15■■□□□ 1.78
SF1-203ENST00000377387 KCNH8Q96L42 1107 aa26.13■■□□□ 1.77
SF1-203ENST00000377387 LRRC9Q6ZRR7 1453 aa26.13■■□□□ 1.77
SF1-203ENST00000377387 POLA1P09884 1462 aaPredicted RBP26.1■■□□□ 1.77
SF1-203ENST00000377387 FHOD3Q2V2M9 1422 aa26.1■■□□□ 1.77
SF1-203ENST00000377387 SETD5Q9C0A6 1442 aa26.1■■□□□ 1.77
SF1-203ENST00000377387 TOPBP1Q92547 1522 aa26.08■■□□□ 1.77
SF1-203ENST00000377387 HIRIP3Q9BW71 556 aaPredicted RBP26.08■■□□□ 1.77
SF1-203ENST00000377387 TDRD9Q8NDG6 1382 aaKnown RBP26.06■■□□□ 1.76
SF1-203ENST00000377387 MAPKBP1O60336 1514 aa26.05■■□□□ 1.76
SF1-203ENST00000377387 DDX10Q13206 875 aaKnown RBP26.04■■□□□ 1.76
SF1-203ENST00000377387 FHAD1B1AJZ9 1412 aa26.04■■□□□ 1.76
SF1-203ENST00000377387 PCF11O94913 1555 aaKnown RBP26■■□□□ 1.75
SF1-203ENST00000377387 DNMBPQ6XZF7 1577 aa26■■□□□ 1.75
SF1-203ENST00000377387 SUPT16HQ9Y5B9 1047 aaKnown RBP25.98■■□□□ 1.75
SF1-203ENST00000377387 MAP3K1Q13233 1512 aa25.97■■□□□ 1.75
SF1-203ENST00000377387 URB2Q14146 1524 aaKnown RBP25.95■■□□□ 1.74
SF1-203ENST00000377387 ABCA10Q8WWZ4 1543 aa25.93■■□□□ 1.74
SF1-203ENST00000377387 WDR97A6NE52 1622 aa25.92■■□□□ 1.74
SF1-203ENST00000377387 MTUS2Q5JR59 1369 aa25.82■■□□□ 1.72
SF1-203ENST00000377387 ARID3CA6NKF2 412 aa25.82■■□□□ 1.72
SF1-203ENST00000377387 CFAP43Q8NDM7 1665 aa25.82■■□□□ 1.72
SF1-203ENST00000377387 CASKIN1Q8WXD9 1431 aa25.81■■□□□ 1.72
SF1-203ENST00000377387 PPP1R15AO75807 674 aaPredicted RBP25.8■■□□□ 1.72
SF1-203ENST00000377387 BCANQ96GW7 911 aa25.8■■□□□ 1.72
SF1-203ENST00000377387 FYCO1Q9BQS8 1478 aa25.79■■□□□ 1.72
SF1-203ENST00000377387 LAMC3Q9Y6N6 1575 aa25.75■■□□□ 1.71
SF1-203ENST00000377387 GAPVD1Q14C86 1478 aa25.74■■□□□ 1.71
SF1-203ENST00000377387 FGD6Q6ZV73 1430 aa25.73■■□□□ 1.71
SF1-203ENST00000377387 FMN1Q68DA7 1419 aa25.72■■□□□ 1.71
SF1-203ENST00000377387 PDS5BQ9NTI5 1447 aa25.72■■□□□ 1.71
SF1-203ENST00000377387 KIF21AQ7Z4S6 1674 aa25.71■■□□□ 1.71
SF1-203ENST00000377387 EFCAB5A4FU69 1503 aa25.71■■□□□ 1.71
SF1-203ENST00000377387 TONSLQ96HA7 1378 aa25.71■■□□□ 1.71
SF1-203ENST00000377387 CHIC2Q9UKJ5 165 aa25.7■■□□□ 1.7
SF1-203ENST00000377387 TRIM52Q96A61 297 aa25.7■■□□□ 1.7
SF1-203ENST00000377387 PTPRKQ15262 1439 aa25.69■■□□□ 1.7
SF1-203ENST00000377387 TIMELESSQ9UNS1 1208 aa25.67■■□□□ 1.7
SF1-203ENST00000377387 RRP7BPQ9NSQ0 103 aa25.66■■□□□ 1.7
SF1-203ENST00000377387 CUL7Q14999 1698 aa25.66■■□□□ 1.7
SF1-203ENST00000377387 AQRO60306 1485 aaKnown RBP eCLIP25.65■■□□□ 1.71e-7■■■■■ 49.1
SF1-203ENST00000377387 CTTNBP2Q8WZ74 1663 aa25.65■■□□□ 1.7
SF1-203ENST00000377387 ANP32CO43423 234 aa25.65■■□□□ 1.7
SF1-203ENST00000377387 CCDC18Q5T9S5 1454 aa25.64■■□□□ 1.7
SF1-203ENST00000377387 FKBP8Q14318 412 aa25.64■■□□□ 1.7
SF1-203ENST00000377387 SNAPC4Q5SXM2 1469 aa25.63■■□□□ 1.69
SF1-203ENST00000377387 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.6■■□□□ 1.69
SF1-203ENST00000377387 ABCA5Q8WWZ7 1642 aa25.59■■□□□ 1.69
SF1-203ENST00000377387 NCOA2Q15596 1464 aa25.58■■□□□ 1.69
SF1-203ENST00000377387 TSHZ2Q9NRE2 1034 aa25.56■■□□□ 1.68
SF1-203ENST00000377387 HFM1A2PYH4 1435 aa25.53■■□□□ 1.68
SF1-203ENST00000377387 MYOM3Q5VTT5 1437 aa25.53■■□□□ 1.68
SF1-203ENST00000377387 UACAQ9BZF9 1416 aa25.53■■□□□ 1.68
SF1-203ENST00000377387 NAIPQ13075 1403 aa25.52■■□□□ 1.68
SF1-203ENST00000377387 LRRIQ1Q96JM4 1722 aa25.49■■□□□ 1.67
SF1-203ENST00000377387 PTPN23Q9H3S7 1636 aa25.49■■□□□ 1.67
SF1-203ENST00000377387 GRIN2BQ13224 1484 aa25.48■■□□□ 1.67
SF1-203ENST00000377387 TARBP1Q13395 1621 aaKnown RBP25.47■■□□□ 1.67
SF1-203ENST00000377387 FOXD1Q16676 465 aa25.46■■□□□ 1.67
SF1-203ENST00000377387 CCER2I3L3R5 266 aa25.45■■□□□ 1.67
SF1-203ENST00000377387 MYT1Q01538 1121 aa25.45■■□□□ 1.66
SF1-203ENST00000377387 ZNF608Q9ULD9 1512 aaPredicted RBP25.45■■□□□ 1.66
SF1-203ENST00000377387 NEFLP07196 543 aa25.44■■□□□ 1.66
SF1-203ENST00000377387 SAMD9Q5K651 1589 aa25.44■■□□□ 1.66
SF1-203ENST00000377387 MAGI3Q5TCQ9 1506 aa25.41■■□□□ 1.66
SF1-203ENST00000377387 SUPT6HQ7KZ85 1726 aaKnown RBP25.4■■□□□ 1.66
SF1-203ENST00000377387 HSPA5P11021 654 aaKnown RBP25.37■■□□□ 1.65
SF1-203ENST00000377387 EHBP1L1Q8N3D4 1523 aa25.36■■□□□ 1.65
SF1-203ENST00000377387 FBLN2P98095 1184 aa25.36■■□□□ 1.65
SF1-203ENST00000377387 CDK13Q14004 1512 aaKnown RBP25.34■■□□□ 1.65
SF1-203ENST00000377387 HNRNPUQ00839 825 aaKnown RBP eCLIP25.33■■□□□ 1.65
SF1-203ENST00000377387 MRC2Q9UBG0 1479 aa25.33■■□□□ 1.65
SF1-203ENST00000377387 UGGT2Q9NYU1 1516 aa25.32■■□□□ 1.64
SF1-203ENST00000377387 MPHOSPH9Q99550 1183 aa25.32■■□□□ 1.64
SF1-203ENST00000377387 PBRM1Q86U86 1689 aa25.32■■□□□ 1.64
SF1-203ENST00000377387 WASHC2AQ641Q2 1341 aa25.3■■□□□ 1.64
SF1-203ENST00000377387 L3MBTL2Q969R5 705 aa25.28■■□□□ 1.64
SF1-203ENST00000377387 IRX6P78412 446 aaPredicted RBP25.28■■□□□ 1.64
SF1-203ENST00000377387 IQGAP2Q13576 1575 aa25.26■■□□□ 1.63
SF1-203ENST00000377387 KDM6BO15054 1643 aa25.26■■□□□ 1.63
SF1-203ENST00000377387 EPRSP07814 1512 aaKnown RBP25.26■■□□□ 1.63
SF1-203ENST00000377387 ZNF644Q9H582 1327 aaPredicted RBP25.26■■□□□ 1.63
SF1-203ENST00000377387 EIF4G2P78344 907 aaKnown RBP eCLIP25.26■■□□□ 1.631e-7■■□□□ 12.5
SF1-203ENST00000377387 ADAMTS12P58397 1594 aa25.24■■□□□ 1.63
SF1-203ENST00000377387 KDM5BQ9UGL1 1544 aa25.24■■□□□ 1.63
SF1-203ENST00000377387 THOC2Q8NI27 1593 aaKnown RBP25.24■■□□□ 1.63
SF1-203ENST00000377387 DENND4BO75064 1496 aaPredicted RBP25.23■■□□□ 1.63
SF1-203ENST00000377387 CNGB1Q14028 1251 aaPredicted RBP25.22■■□□□ 1.63
SF1-203ENST00000377387 ARHGEF11O15085 1522 aa25.21■■□□□ 1.63
SF1-203ENST00000377387 C11orf95C9JLR9 678 aaPredicted RBP25.2■■□□□ 1.62
SF1-203ENST00000377387 CCDC184Q52MB2 194 aa25.2■■□□□ 1.62
SF1-203ENST00000377387 HECW1Q76N89 1606 aa25.19■■□□□ 1.62
SF1-203ENST00000377387 ERCC6Q03468 1493 aa25.17■■□□□ 1.62
SF1-203ENST00000377387 TCOF1Q13428 1488 aaKnown RBP25.17■■□□□ 1.62
SF1-203ENST00000377387 SLC4A1APQ9BWU0 796 aaKnown RBP25.16■■□□□ 1.62
SF1-203ENST00000377387 CHMP7Q8WUX9 453 aaPredicted RBP25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms