RNA–Protein interactions for RNA: ENST00000377197.7

C9orf135-201, Transcript of chromosome 9 open reading frame 135, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf135, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-201ENST00000377197 IFT140Q96RY7 1462 aa18.04■□□□□ 0.48
C9orf135-201ENST00000377197 TARBP1Q13395 1621 aaKnown RBP17.98■□□□□ 0.47
C9orf135-201ENST00000377197 ZBTB12Q9Y330 459 aaPredicted RBP17.98■□□□□ 0.47
C9orf135-201ENST00000377197 EIF4G3O43432 1585 aaKnown RBP17.98■□□□□ 0.47
C9orf135-201ENST00000377197 RIMBP3CA6NJZ7 1639 aa17.97■□□□□ 0.47
C9orf135-201ENST00000377197 RIMBP3BA6NNM3 1639 aa17.97■□□□□ 0.47
C9orf135-201ENST00000377197 RIMBP3Q9UFD9 1639 aa17.97■□□□□ 0.47
C9orf135-201ENST00000377197 ZNF608Q9ULD9 1512 aaPredicted RBP17.96■□□□□ 0.47
C9orf135-201ENST00000377197 POLA1P09884 1462 aaPredicted RBP17.95■□□□□ 0.46
C9orf135-201ENST00000377197 CUX1P39880 1505 aa17.94■□□□□ 0.46
C9orf135-201ENST00000377197 MKRN4PQ13434 485 aaPredicted RBP17.91■□□□□ 0.46
C9orf135-201ENST00000377197 FGD5Q6ZNL6 1462 aa17.9■□□□□ 0.46
C9orf135-201ENST00000377197 WDR97A6NE52 1622 aa17.87■□□□□ 0.45
C9orf135-201ENST00000377197 ARHGEF11O15085 1522 aa17.85■□□□□ 0.45
C9orf135-201ENST00000377197 RAD54L2Q9Y4B4 1467 aa17.85■□□□□ 0.45
C9orf135-201ENST00000377197 SOGA1O94964 1423 aa17.83■□□□□ 0.45
C9orf135-201ENST00000377197 FBLN2P98095 1184 aa17.83■□□□□ 0.44
C9orf135-201ENST00000377197 BIVM-ERCC5R4GMW8 1640 aa17.83■□□□□ 0.44
C9orf135-201ENST00000377197 CHD1O14646 1710 aa17.82■□□□□ 0.44
C9orf135-201ENST00000377197 AQRO60306 1485 aaKnown RBP eCLIP17.81■□□□□ 0.44
C9orf135-201ENST00000377197 TOP2BQ02880 1626 aa17.79■□□□□ 0.44
C9orf135-201ENST00000377197 PBRM1Q86U86 1689 aa17.78■□□□□ 0.44
C9orf135-201ENST00000377197 RBM42Q9BTD8 480 aaKnown RBP17.77■□□□□ 0.44
C9orf135-201ENST00000377197 SYNJ1O43426 1573 aa17.77■□□□□ 0.44
C9orf135-201ENST00000377197 WRNQ14191 1432 aaPredicted RBP eCLIP17.74■□□□□ 0.43
C9orf135-201ENST00000377197 TDRD9Q8NDG6 1382 aaKnown RBP17.73■□□□□ 0.43
C9orf135-201ENST00000377197 ABCA5Q8WWZ7 1642 aa17.72■□□□□ 0.43
C9orf135-201ENST00000377197 ABCA10Q8WWZ4 1543 aa17.72■□□□□ 0.43
C9orf135-201ENST00000377197 SNAPC4Q5SXM2 1469 aa17.69■□□□□ 0.42
C9orf135-201ENST00000377197 CYB5RLQ6IPT4 315 aa17.69■□□□□ 0.42
C9orf135-201ENST00000377197 GRIN2BQ13224 1484 aa17.68■□□□□ 0.42
C9orf135-201ENST00000377197 MAGI1Q96QZ7 1491 aaPredicted RBP17.68■□□□□ 0.42
C9orf135-201ENST00000377197 GAPVD1Q14C86 1478 aa17.66■□□□□ 0.42
C9orf135-201ENST00000377197 ARAP1Q96P48 1450 aa17.63■□□□□ 0.41
C9orf135-201ENST00000377197 SYNJ2O15056 1496 aa17.59■□□□□ 0.41
C9orf135-201ENST00000377197 ADAMTS12P58397 1594 aa17.57■□□□□ 0.4
C9orf135-201ENST00000377197 CLASP1Q7Z460 1538 aa17.55■□□□□ 0.4
C9orf135-201ENST00000377197 ERICH3Q5RHP9 1530 aa17.52■□□□□ 0.4
C9orf135-201ENST00000377197 SPDYE2BA6NHP3 402 aa17.52■□□□□ 0.4
C9orf135-201ENST00000377197 SPDYE6P0CI01 402 aa17.52■□□□□ 0.4
C9orf135-201ENST00000377197 SPDYE2Q495Y8 402 aa17.52■□□□□ 0.4
C9orf135-201ENST00000377197 CHMP7Q8WUX9 453 aaPredicted RBP17.52■□□□□ 0.4
C9orf135-201ENST00000377197 AKT1S1Q96B36 256 aa17.52■□□□□ 0.4
C9orf135-201ENST00000377197 ZNF692Q9BU19 519 aaPredicted RBP17.47■□□□□ 0.39
C9orf135-201ENST00000377197 GRIN2AQ12879 1464 aa17.47■□□□□ 0.39
C9orf135-201ENST00000377197 FHAD1B1AJZ9 1412 aa17.44■□□□□ 0.38
C9orf135-201ENST00000377197 CEP170Q5SW79 1584 aa17.42■□□□□ 0.38
C9orf135-201ENST00000377197 REM2Q8IYK8 340 aaPredicted RBP17.42■□□□□ 0.38
C9orf135-201ENST00000377197 CUL7Q14999 1698 aa17.4■□□□□ 0.38
C9orf135-201ENST00000377197 SSUH2Q9Y2M2 353 aa17.4■□□□□ 0.38
C9orf135-201ENST00000377197 NUP160Q12769 1436 aa17.38■□□□□ 0.37
C9orf135-201ENST00000377197 KIF27Q86VH2 1401 aa17.38■□□□□ 0.37
C9orf135-201ENST00000377197 SHROOM2Q13796 1616 aa17.34■□□□□ 0.37
C9orf135-201ENST00000377197 RUSC2Q8N2Y8 1516 aa17.32■□□□□ 0.36
C9orf135-201ENST00000377197 SPDYE4A6NLX3 237 aa17.27■□□□□ 0.36
C9orf135-201ENST00000377197 ERCC6L2Q5T890 1561 aa17.27■□□□□ 0.35
C9orf135-201ENST00000377197 IGF1RP08069 1367 aa17.27■□□□□ 0.35
C9orf135-201ENST00000377197 PITPNM1O00562 1244 aa17.26■□□□□ 0.35
C9orf135-201ENST00000377197 CHRDL2Q6WN34 429 aa17.26■□□□□ 0.35
C9orf135-201ENST00000377197 CARMIL1Q5VZK9 1371 aa17.18■□□□□ 0.34
C9orf135-201ENST00000377197 KIAA0586Q9BVV6 1533 aa17.16■□□□□ 0.34
C9orf135-201ENST00000377197 PRG4Q92954 1404 aaPredicted RBP17.16■□□□□ 0.34
C9orf135-201ENST00000377197 CLEC11AQ9Y240 323 aa17.13■□□□□ 0.33
C9orf135-201ENST00000377197 IQGAP2Q13576 1575 aa17.13■□□□□ 0.33
C9orf135-201ENST00000377197 RAPGEF2Q9Y4G8 1499 aa17.12■□□□□ 0.33
C9orf135-201ENST00000377197 CTTNBP2Q8WZ74 1663 aa17.11■□□□□ 0.33
C9orf135-201ENST00000377197 POTEHQ6S545 545 aa17.11■□□□□ 0.33
C9orf135-201ENST00000377197 JPH4Q96JJ6 628 aa17.11■□□□□ 0.33
C9orf135-201ENST00000377197 SPDYE1Q8NFV5 336 aaPredicted RBP17.09■□□□□ 0.33
C9orf135-201ENST00000377197 KIF13AQ9H1H9 1805 aa17.07■□□□□ 0.32
C9orf135-201ENST00000377197 FKBP8Q14318 412 aa17.02■□□□□ 0.32
C9orf135-201ENST00000377197 ADCY10Q96PN6 1610 aa17.01■□□□□ 0.31
C9orf135-201ENST00000377197 PRXQ9BXM0 1461 aa17■□□□□ 0.31
C9orf135-201ENST00000377197 PIP4P2Q8N4L2 257 aa17■□□□□ 0.31
C9orf135-201ENST00000377197 CARMIL2Q6F5E8 1435 aa16.99■□□□□ 0.31
C9orf135-201ENST00000377197 UGGT2Q9NYU1 1516 aa16.99■□□□□ 0.31
C9orf135-201ENST00000377197 KIAA0556O60303 1618 aa16.97■□□□□ 0.31
C9orf135-201ENST00000377197 EEA1Q15075 1411 aa16.96■□□□□ 0.31
C9orf135-201ENST00000377197 DISP1Q96F81 1524 aa16.96■□□□□ 0.31
C9orf135-201ENST00000377197 FXR2P51116 673 aaKnown RBP eCLIP16.95■□□□□ 0.3
C9orf135-201ENST00000377197 TNIKQ9UKE5 1360 aa16.92■□□□□ 0.3
C9orf135-201ENST00000377197 PTPRGP23470 1445 aa16.91■□□□□ 0.3
C9orf135-201ENST00000377197 PROM2Q8N271 834 aa16.91■□□□□ 0.3
C9orf135-201ENST00000377197 MAPKBP1O60336 1514 aa16.91■□□□□ 0.3
C9orf135-201ENST00000377197 NPM1P06748 294 aaKnown RBP eCLIP16.89■□□□□ 0.29
C9orf135-201ENST00000377197 ABCC10Q5T3U5 1492 aa16.88■□□□□ 0.29
C9orf135-201ENST00000377197 DIP2BQ9P265 1576 aa16.88■□□□□ 0.29
C9orf135-201ENST00000377197 GOLGA3Q08378 1498 aa16.87■□□□□ 0.29
C9orf135-201ENST00000377197 PRR29P0C7W0 189 aa16.87■□□□□ 0.29
C9orf135-201ENST00000377197 FAM69CQ0P6D2 419 aa16.87■□□□□ 0.29
C9orf135-201ENST00000377197 KIF21BO75037 1637 aa16.87■□□□□ 0.29
C9orf135-201ENST00000377197 KDM6BO15054 1643 aa16.86■□□□□ 0.29
C9orf135-201ENST00000377197 TTBK1Q5TCY1 1321 aaPredicted RBP16.85■□□□□ 0.29
C9orf135-201ENST00000377197 ABCC2Q92887 1545 aa16.85■□□□□ 0.29
C9orf135-201ENST00000377197 UHRF1BP1LA0JNW5 1464 aa16.84■□□□□ 0.29
C9orf135-201ENST00000377197 TSPOAP1O95153 1857 aa16.83■□□□□ 0.28
C9orf135-201ENST00000377197 UACAQ9BZF9 1416 aa16.82■□□□□ 0.28
C9orf135-201ENST00000377197 SAMD9Q5K651 1589 aa16.81■□□□□ 0.28
C9orf135-201ENST00000377197 CHADLQ6NUI6 762 aa16.81■□□□□ 0.28
C9orf135-201ENST00000377197 ZCCHC11Q5TAX3 1644 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 198.8 ms