RNA–Protein interactions for RNA: ENST00000377197.7

C9orf135-201, Transcript of chromosome 9 open reading frame 135, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf135, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-201ENST00000377197 AEBP2Q6ZN18 517 aaPredicted RBP31.72■■■□□ 2.67
C9orf135-201ENST00000377197 CHIC1Q5VXU3 224 aa30.54■■■□□ 2.48
C9orf135-201ENST00000377197 PHF23Q9BUL5 403 aaPredicted RBP26.92■■□□□ 1.9
C9orf135-201ENST00000377197 SENP3Q9H4L4 574 aaPredicted RBP26.81■■□□□ 1.88
C9orf135-201ENST00000377197 FOXD1Q16676 465 aa25.04■■□□□ 1.6
C9orf135-201ENST00000377197 NISCHQ9Y2I1 1504 aa24.79■■□□□ 1.56
C9orf135-201ENST00000377197 PLPPR3Q6T4P5 718 aa24.6■■□□□ 1.53
C9orf135-201ENST00000377197 PPP6R1Q9UPN7 881 aa23.89■■□□□ 1.41
C9orf135-201ENST00000377197 ADRA2BP18089 450 aa23.84■■□□□ 1.41
C9orf135-201ENST00000377197 PIAS4Q8N2W9 510 aaPredicted RBP23.49■■□□□ 1.35
C9orf135-201ENST00000377197 MSH5O43196 834 aa23.08■■□□□ 1.29
C9orf135-201ENST00000377197 CCDC180Q9P1Z9 1646 aa22.23■■□□□ 1.15
C9orf135-201ENST00000377197 ABCC9O60706 1549 aa21.94■■□□□ 1.1
C9orf135-201ENST00000377197 MAPK8IP2Q13387 824 aaPredicted RBP21.76■■□□□ 1.07
C9orf135-201ENST00000377197 POTEDQ86YR6 584 aa21.73■■□□□ 1.07
C9orf135-201ENST00000377197 PPP4R3CPQ6ZMV5 832 aa21.7■■□□□ 1.06
C9orf135-201ENST00000377197 SCAF1Q9H7N4 1312 aaKnown RBP21.61■■□□□ 1.05
C9orf135-201ENST00000377197 DMRT2Q9Y5R5 561 aa21.38■■□□□ 1.01
C9orf135-201ENST00000377197 CNKSR2Q8WXI2 1034 aa21.11■□□□□ 0.97
C9orf135-201ENST00000377197 NCBP3Q53F19 620 aaKnown RBP20.93■□□□□ 0.94
C9orf135-201ENST00000377197 RB1CC1Q8TDY2 1594 aa20.93■□□□□ 0.94
C9orf135-201ENST00000377197 KCNA4P22459 653 aa20.88■□□□□ 0.93
C9orf135-201ENST00000377197 NACADO15069 1562 aa20.85■□□□□ 0.93
C9orf135-201ENST00000377197 HOXD11P31277 338 aaPredicted RBP20.8■□□□□ 0.92
C9orf135-201ENST00000377197 RNF216Q9NWF9 866 aaPredicted RBP20.78■□□□□ 0.92
C9orf135-201ENST00000377197 NPM3O75607 178 aaKnown RBP20.75■□□□□ 0.91
C9orf135-201ENST00000377197 DNAJC5BQ9UF47 199 aa20.74■□□□□ 0.91
C9orf135-201ENST00000377197 MYO15BQ96JP2 1530 aa20.66■□□□□ 0.9
C9orf135-201ENST00000377197 ZCCHC6Q5VYS8 1495 aaKnown RBP20.65■□□□□ 0.9
C9orf135-201ENST00000377197 DCAF8L2P0C7V8 631 aa20.65■□□□□ 0.9
C9orf135-201ENST00000377197 UNC13AQ9UPW8 1703 aa20.57■□□□□ 0.88
C9orf135-201ENST00000377197 DCAF8L1A6NGE4 600 aa20.54■□□□□ 0.88
C9orf135-201ENST00000377197 DCAF1Q9Y4B6 1507 aa20.53■□□□□ 0.88
C9orf135-201ENST00000377197 PABPN1Q86U42 306 aaKnown RBP eCLIP20.31■□□□□ 0.84
C9orf135-201ENST00000377197 BICRAQ9NZM4 1560 aa20.28■□□□□ 0.84
C9orf135-201ENST00000377197 SCRIBQ14160 1630 aa20.22■□□□□ 0.83
C9orf135-201ENST00000377197 SHROOM4Q9ULL8 1493 aa20.07■□□□□ 0.8
C9orf135-201ENST00000377197 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.84■□□□□ 0.77
C9orf135-201ENST00000377197 CC2D2AQ9P2K1 1620 aa19.83■□□□□ 0.76
C9orf135-201ENST00000377197 RNF39Q9H2S5 420 aa19.82■□□□□ 0.76
C9orf135-201ENST00000377197 CECR2Q9BXF3 1484 aa19.8■□□□□ 0.76
C9orf135-201ENST00000377197 EIF4G1Q04637 1599 aaKnown RBP19.77■□□□□ 0.76
C9orf135-201ENST00000377197 SLC4A1APQ9BWU0 796 aaKnown RBP19.76■□□□□ 0.75
C9orf135-201ENST00000377197 SLC4A2P04920 1241 aa19.71■□□□□ 0.75
C9orf135-201ENST00000377197 CACNB1Q02641 598 aaPredicted RBP19.55■□□□□ 0.72
C9orf135-201ENST00000377197 U3KPZ7 1027 aaPredicted RBP19.54■□□□□ 0.72
C9orf135-201ENST00000377197 C1QBPQ07021 282 aaKnown RBP19.49■□□□□ 0.71
C9orf135-201ENST00000377197 DNAJC5Q9H3Z4 198 aa19.35■□□□□ 0.69
C9orf135-201ENST00000377197 SMARCA4P51532 1647 aa19.33■□□□□ 0.68
C9orf135-201ENST00000377197 BAZ1AQ9NRL2 1556 aaPredicted RBP19.26■□□□□ 0.67
C9orf135-201ENST00000377197 ZBTB22O15209 634 aa19.25■□□□□ 0.67
C9orf135-201ENST00000377197 FOXD4L1Q9NU39 408 aa19.22■□□□□ 0.67
C9orf135-201ENST00000377197 SMARCA2P51531 1590 aa19.2■□□□□ 0.66
C9orf135-201ENST00000377197 NCAPD3P42695 1498 aa19.17■□□□□ 0.66
C9orf135-201ENST00000377197 ATAD2BQ9ULI0 1458 aa19.17■□□□□ 0.66
C9orf135-201ENST00000377197 HMGXB3Q12766 1538 aa19.15■□□□□ 0.66
C9orf135-201ENST00000377197 SPINK5Q9NQ38 1064 aaPredicted RBP19.13■□□□□ 0.65
C9orf135-201ENST00000377197 PEG3Q9GZU2 1588 aa19.13■□□□□ 0.65
C9orf135-201ENST00000377197 MYCNP04198 464 aaPredicted RBP19.1■□□□□ 0.65
C9orf135-201ENST00000377197 MROH2BQ7Z745 1585 aa19.1■□□□□ 0.65
C9orf135-201ENST00000377197 CUX2O14529 1486 aa19.08■□□□□ 0.64
C9orf135-201ENST00000377197 BAZ1BQ9UIG0 1483 aaKnown RBP19.04■□□□□ 0.64
C9orf135-201ENST00000377197 ERCC6Q03468 1493 aa19.03■□□□□ 0.64
C9orf135-201ENST00000377197 CAPN15O75808 1086 aa19.01■□□□□ 0.63
C9orf135-201ENST00000377197 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.99■□□□□ 0.63
C9orf135-201ENST00000377197 HNRNPUL2Q1KMD3 747 aaKnown RBP18.99■□□□□ 0.63
C9orf135-201ENST00000377197 SAMD1Q6SPF0 538 aaPredicted RBP18.95■□□□□ 0.62
C9orf135-201ENST00000377197 WIZO95785 1651 aa18.95■□□□□ 0.62
C9orf135-201ENST00000377197 EHMT2Q96KQ7 1210 aa18.91■□□□□ 0.62
C9orf135-201ENST00000377197 TRHP20396 242 aaPredicted RBP18.86■□□□□ 0.61
C9orf135-201ENST00000377197 APLP2Q06481 763 aa18.84■□□□□ 0.61
C9orf135-201ENST00000377197 CSRNP3Q8WYN3 585 aa18.82■□□□□ 0.6
C9orf135-201ENST00000377197 ATF5Q9Y2D1 282 aaPredicted RBP18.79■□□□□ 0.6
C9orf135-201ENST00000377197 RSF1Q96T23 1441 aaPredicted RBP18.79■□□□□ 0.6
C9orf135-201ENST00000377197 NESP48681 1621 aa18.78■□□□□ 0.6
C9orf135-201ENST00000377197 LAMC3Q9Y6N6 1575 aa18.78■□□□□ 0.6
C9orf135-201ENST00000377197 DSG3P32926 999 aa18.76■□□□□ 0.59
C9orf135-201ENST00000377197 ZNF219Q9P2Y4 722 aaPredicted RBP18.73■□□□□ 0.59
C9orf135-201ENST00000377197 TOP2AP11388 1531 aaKnown RBP18.73■□□□□ 0.59
C9orf135-201ENST00000377197 ABCB7O75027 752 aa18.69■□□□□ 0.58
C9orf135-201ENST00000377197 KIF21AQ7Z4S6 1674 aa18.68■□□□□ 0.58
C9orf135-201ENST00000377197 THOC2Q8NI27 1593 aaKnown RBP18.67■□□□□ 0.58
C9orf135-201ENST00000377197 CADPSQ9ULU8 1353 aa18.59■□□□□ 0.57
C9orf135-201ENST00000377197 PDS5BQ9NTI5 1447 aa18.57■□□□□ 0.56
C9orf135-201ENST00000377197 PRDM2Q13029 1718 aa18.54■□□□□ 0.56
C9orf135-201ENST00000377197 ATXN8OSP0DMR3 200 aa18.5■□□□□ 0.55
C9orf135-201ENST00000377197 CFTRP13569 1480 aa18.48■□□□□ 0.55
C9orf135-201ENST00000377197 POLA2Q14181 598 aa18.46■□□□□ 0.55
C9orf135-201ENST00000377197 TRIM41Q8WV44 630 aa18.44■□□□□ 0.54
C9orf135-201ENST00000377197 MRC2Q9UBG0 1479 aa18.44■□□□□ 0.54
C9orf135-201ENST00000377197 CEP164Q9UPV0 1460 aa18.44■□□□□ 0.54
C9orf135-201ENST00000377197 CCDC88BA6NC98 1476 aa18.43■□□□□ 0.54
C9orf135-201ENST00000377197 FANCD2Q9BXW9 1451 aa18.43■□□□□ 0.54
C9orf135-201ENST00000377197 WDR62O43379 1518 aa18.41■□□□□ 0.54
C9orf135-201ENST00000377197 URB2Q14146 1524 aaKnown RBP18.25■□□□□ 0.51
C9orf135-201ENST00000377197 SUPT5HO00267 1087 aaKnown RBP18.15■□□□□ 0.5
C9orf135-201ENST00000377197 DNMBPQ6XZF7 1577 aa18.13■□□□□ 0.49
C9orf135-201ENST00000377197 TOPBP1Q92547 1522 aa18.13■□□□□ 0.49
C9orf135-201ENST00000377197 ABCC8Q09428 1581 aa18.11■□□□□ 0.49
C9orf135-201ENST00000377197 OSCARQ8IYS5 282 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms